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Items: 37

1.

Low complexity regions in the proteins of prokaryotes perform important functional roles and are highly conserved.

Ntountoumi C, Vlastaridis P, Mossialos D, Stathopoulos C, Iliopoulos I, Promponas V, Oliver SG, Amoutzias GD.

Nucleic Acids Res. 2019 Sep 4. pii: gkz730. doi: 10.1093/nar/gkz730. [Epub ahead of print]

PMID:
31504783
2.

WarmStart colorimetric LAMP for the specific and rapid detection of HPV16 and HPV18 DNA.

Daskou M, Tsakogiannis D, Dimitriou TG, Amoutzias GD, Mossialos D, Kottaridi C, Gartzonika C, Markoulatos P.

J Virol Methods. 2019 Aug;270:87-94. doi: 10.1016/j.jviromet.2019.04.023. Epub 2019 Apr 28.

PMID:
31042552
3.

Α 2-stage, nested-like nucleic acid amplification method (IsoPCR) for the highly sensitive detection of HPV16 and HPV18 DNA.

Daskou M, Tsakogiannis D, Dimitriou TG, Manali M, Apti C, Amoutzias GD, Mossialos D, Kottaridi C, Markoulatos P.

Mol Cell Probes. 2019 Jun;45:1-7. doi: 10.1016/j.mcp.2019.03.003. Epub 2019 Mar 19.

PMID:
30902662
4.

NAT/NCS2-hound: a webserver for the detection and evolutionary classification of prokaryotic and eukaryotic nucleobase-cation symporters of the NAT/NCS2 family.

Chaliotis A, Vlastaridis P, Ntountoumi C, Botou M, Yalelis V, Lazou P, Tatsaki E, Mossialos D, Frillingos S, Amoutzias GD.

Gigascience. 2018 Dec 1;7(12). doi: 10.1093/gigascience/giy133.

5.

Large-scale genomic analysis reveals recurrent patterns of intertypic recombination in human enteroviruses.

Nikolaidis M, Mimouli K, Kyriakopoulou Z, Tsimpidis M, Tsakogiannis D, Markoulatos P, Amoutzias GD.

Virology. 2019 Jan 2;526:72-80. doi: 10.1016/j.virol.2018.10.006. Epub 2018 Oct 23.

PMID:
30366300
6.

Microbial diversity in biodeteriorated Greek historical documents dating back to the 19th and 20th century: A case study.

Karakasidou K, Nikolouli K, Amoutzias GD, Pournou A, Manassis C, Tsiamis G, Mossialos D.

Microbiologyopen. 2018 Oct;7(5):e00596. doi: 10.1002/mbo3.596. Epub 2018 Feb 27.

7.

Effect of polyphenols from coffee and grape on gene expression in myoblasts.

Priftis A, Goutzourelas N, Halabalaki M, Ntasi G, Stagos D, Amoutzias GD, Skaltsounis LA, Kouretas D.

Mech Ageing Dev. 2018 Jun;172:115-122. doi: 10.1016/j.mad.2017.11.015. Epub 2017 Nov 23.

PMID:
29174054
8.

Association of p16 (CDKN2A) polymorphisms with the development of HPV16-related precancerous lesions and cervical cancer in the Greek population.

Tsakogiannis D, Moschonas GD, Bella E, Kyriakopoulou Z, Amoutzias GD, Dimitriou TG, Kottaridi C, Markoulatos P.

J Med Virol. 2018 May;90(5):965-971. doi: 10.1002/jmv.24996. Epub 2017 Dec 11.

PMID:
29168898
9.

Intra- and inter-serotypic recombinations in the 5΄ UTR-VP4 region of Echovirus 30 strains.

Kyriakopoulou Z, Amoutzias GD, Dimitriou TG, Tsakogiannis D, Mossialos D, Markoulatos P.

Arch Virol. 2018 Feb;163(2):365-375. doi: 10.1007/s00705-017-3600-1. Epub 2017 Oct 30.

PMID:
29086105
10.

Detection of negative and positive RNA strand of poliovirus Sabin 1 and echovirus E19 by a stem-loop reverse transcription PCR.

Fikatas A, Dimitriou TG, Kyriakopoulou Z, Moschonas GD, Amoutzias GD, Mossialos D, Gartzonika C, Levidiotou-Stefanou S, Markoulatos P.

Lett Appl Microbiol. 2017 Sep;65(3):234-240. doi: 10.1111/lam.12766. Epub 2017 Jul 25.

PMID:
28631392
11.

Estimating the total number of phosphoproteins and phosphorylation sites in eukaryotic proteomes.

Vlastaridis P, Kyriakidou P, Chaliotis A, Van de Peer Y, Oliver SG, Amoutzias GD.

Gigascience. 2017 Feb 1;6(2):1-11. doi: 10.1093/gigascience/giw015.

12.

The Pivotal Role of Protein Phosphorylation in the Control of Yeast Central Metabolism.

Vlastaridis P, Papakyriakou A, Chaliotis A, Stratikos E, Oliver SG, Amoutzias GD.

G3 (Bethesda). 2017 Apr 3;7(4):1239-1249. doi: 10.1534/g3.116.037218.

13.

The complex evolutionary history of aminoacyl-tRNA synthetases.

Chaliotis A, Vlastaridis P, Mossialos D, Ibba M, Becker HD, Stathopoulos C, Amoutzias GD.

Nucleic Acids Res. 2017 Feb 17;45(3):1059-1068. doi: 10.1093/nar/gkw1182.

14.

T-RECs: rapid and large-scale detection of recombination events among different evolutionary lineages of viral genomes.

Tsimpidis M, Bachoumis G, Mimouli K, Kyriakopoulou Z, Robertson DL, Markoulatos P, Amoutzias GD.

BMC Bioinformatics. 2017 Jan 5;18(1):13. doi: 10.1186/s12859-016-1420-z.

15.

SNP Identification through Transcriptome Analysis of the European Brown Hare (Lepus europaeus): Cellular Energetics and Mother's Curse.

Amoutzias GD, Giannoulis T, Moutou KA, Psarra AM, Stamatis C, Tsipourlianos A, Mamuris Z.

PLoS One. 2016 Jul 26;11(7):e0159939. doi: 10.1371/journal.pone.0159939. eCollection 2016.

16.

Serum Neutralization Assay for the Determination of Antibody Levels Against Non-Polio Enterovirus Strains in Central and Western Greece.

Fikatas A, Dimitriou TG, Kyriakopoulou Z, Tsachouridou O, Gartzonika C, Levidiotou-Stefanou S, Amoutzias GD, Markoulatos P.

Viral Immunol. 2016 Sep;29(7):444-50. doi: 10.1089/vim.2016.0049. Epub 2016 Jul 13.

PMID:
27410516
17.

Discovery Strategies of Bioactive Compounds Synthesized by Nonribosomal Peptide Synthetases and Type-I Polyketide Synthases Derived from Marine Microbiomes.

Amoutzias GD, Chaliotis A, Mossialos D.

Mar Drugs. 2016 Apr 16;14(4). pii: E80. doi: 10.3390/md14040080. Review.

18.

Genetic variation of eggplant mottled dwarf virus from annual and perennial plant hosts.

Pappi PG, Maliogka VI, Amoutzias GD, Katis NI.

Arch Virol. 2016 Mar;161(3):631-9. doi: 10.1007/s00705-015-2705-7. Epub 2015 Dec 12.

PMID:
26660163
19.

Molecular epidemiology and evolutionary dynamics of Echovirus 3 serotype.

Kyriakopoulou Z, Bletsa M, Tsakogiannis D, Dimitriou TG, Amoutzias GD, Gartzonika C, Levidiotou-Stefanou S, Markoulatos P.

Infect Genet Evol. 2015 Jun;32:305-12. doi: 10.1016/j.meegid.2015.03.008. Epub 2015 Mar 17.

PMID:
25791929
20.

Recombination among human non-polio enteroviruses: implications for epidemiology and evolution.

Kyriakopoulou Z, Pliaka V, Amoutzias GD, Markoulatos P.

Virus Genes. 2015 Apr;50(2):177-88. doi: 10.1007/s11262-014-1152-y. Epub 2014 Dec 24. Review.

PMID:
25537948
21.

Determination of human papillomavirus 16 physical status through E1/E6 and E2/E6 ratio analysis.

Tsakogiannis D, Kyriakopoulou Z, Ruether IG, Amoutzias GD, Dimitriou TG, Diamantidou V, Kotsovassilis C, Markoulatos P.

J Med Microbiol. 2014 Dec;63(Pt 12):1716-23. doi: 10.1099/jmm.0.076810-0. Epub 2014 Sep 11.

PMID:
25212758
22.

Characterization of novel intergenogroup and intergenotype recombinant noroviruses from central Greece.

Ruether IG, Dimitriou TG, Tsakogiannis D, Kyriakopoulou Z, Amoutzias GD, Gartzonika C, Levidiotou-Stefanou S, Markoulatos P.

Mol Cell Probes. 2014 Aug;28(4):204-10. doi: 10.1016/j.mcp.2014.04.001. Epub 2014 Apr 18.

PMID:
24751495
23.

Chemoprevention of liver cancer by plant polyphenols.

Stagos D, Amoutzias GD, Matakos A, Spyrou A, Tsatsakis AM, Kouretas D.

Food Chem Toxicol. 2012 Jun;50(6):2155-70. doi: 10.1016/j.fct.2012.04.002. Epub 2012 Apr 11. Review.

PMID:
22521445
24.

Evaluation and properties of the budding yeast phosphoproteome.

Amoutzias GD, He Y, Lilley KS, Van de Peer Y, Oliver SG.

Mol Cell Proteomics. 2012 Jun;11(6):M111.009555. doi: 10.1074/mcp.M111.009555. Epub 2012 Jan 27.

25.

Posttranslational regulation impacts the fate of duplicated genes.

Amoutzias GD, He Y, Gordon J, Mossialos D, Oliver SG, Van de Peer Y.

Proc Natl Acad Sci U S A. 2010 Feb 16;107(7):2967-71. doi: 10.1073/pnas.0911603107. Epub 2009 Dec 22.

26.

Role of siderophores in cystic fibrosis pathogenesis: foes or friends?

Mossialos D, Amoutzias GD.

Int J Med Microbiol. 2009 Feb;299(2):87-98. doi: 10.1016/j.ijmm.2008.06.008. Epub 2008 Aug 27. Review.

PMID:
18755629
27.

The evolution of protein interaction networks in regulatory proteins.

Amoutzias GD, Robertson DL, Bornberg-Bauer E.

Comp Funct Genomics. 2004;5(1):79-84. doi: 10.1002/cfg.365.

28.

Evolution and taxonomic distribution of nonribosomal peptide and polyketide synthases.

Amoutzias GD, Van de Peer Y, Mossialos D.

Future Microbiol. 2008 Jun;3(3):361-70. doi: 10.2217/17460913.3.3.361. Review.

PMID:
18505401
29.

Choose your partners: dimerization in eukaryotic transcription factors.

Amoutzias GD, Robertson DL, Van de Peer Y, Oliver SG.

Trends Biochem Sci. 2008 May;33(5):220-9. doi: 10.1016/j.tibs.2008.02.002. Epub 2008 Apr 9. Review.

PMID:
18406148
30.

Reconstruction of ancestral protein interaction networks for the bZIP transcription factors.

Pinney JW, Amoutzias GD, Rattray M, Robertson DL.

Proc Natl Acad Sci U S A. 2007 Dec 18;104(51):20449-53. Epub 2007 Dec 12.

31.

An exploration of alternative visualisations of the basic helix-loop-helix protein interaction network.

Holden BJ, Pinney JW, Lovell SC, Amoutzias GD, Robertson DL.

BMC Bioinformatics. 2007 Aug 6;8:289.

32.

Siderophores in fluorescent pseudomonads: new tricks from an old dog.

Mossialos D, Amoutzias GD.

Future Microbiol. 2007 Aug;2(4):387-95. Review.

PMID:
17683275
33.

A protein interaction atlas for the nuclear receptors: properties and quality of a hub-based dimerisation network.

Amoutzias GD, Pichler EE, Mian N, De Graaf D, Imsiridou A, Robinson-Rechavi M, Bornberg-Bauer E, Robertson DL, Oliver SG.

BMC Syst Biol. 2007 Jul 31;1:34.

34.

One billion years of bZIP transcription factor evolution: conservation and change in dimerization and DNA-binding site specificity.

Amoutzias GD, Veron AS, Weiner J 3rd, Robinson-Rechavi M, Bornberg-Bauer E, Oliver SG, Robertson DL.

Mol Biol Evol. 2007 Mar;24(3):827-35. Epub 2006 Dec 28.

PMID:
17194801
35.

Reduction/oxidation-phosphorylation control of DNA binding in the bZIP dimerization network.

Amoutzias GD, Bornberg-Bauer E, Oliver SG, Robertson DL.

BMC Genomics. 2006 May 4;7:107.

36.

Phylogenetic profiling of protein interaction networks in eukaryotic transcription factors reveals focal proteins being ancestral to hubs.

Amoutzias GD, Weiner J, Bornberg-Bauer E.

Gene. 2005 Mar 14;347(2):247-53. Epub 2005 Feb 24.

PMID:
15777629
37.

Convergent evolution of gene networks by single-gene duplications in higher eukaryotes.

Amoutzias GD, Robertson DL, Oliver SG, Bornberg-Bauer E.

EMBO Rep. 2004 Mar;5(3):274-9. Epub 2004 Feb 13.

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