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Items: 1 to 50 of 386

1.

Stochastic tunneling across fitness valleys can give rise to a logarithmic long-term fitness trajectory.

Guo Y, Vucelja M, Amir A.

Sci Adv. 2019 Jul 31;5(7):eaav3842. doi: 10.1126/sciadv.aav3842. eCollection 2019 Jul.

2.

Quantifying and Understanding Well-to-Well Contamination in Microbiome Research.

Minich JJ, Sanders JG, Amir A, Humphrey G, Gilbert JA, Knight R.

mSystems. 2019 Jun 25;4(4). pii: e00186-19. doi: 10.1128/mSystems.00186-19.

3.

The impact of skin care products on skin chemistry and microbiome dynamics.

Bouslimani A, da Silva R, Kosciolek T, Janssen S, Callewaert C, Amir A, Dorrestein K, Melnik AV, Zaramela LS, Kim JN, Humphrey G, Schwartz T, Sanders K, Brennan C, Luzzatto-Knaan T, Ackermann G, McDonald D, Zengler K, Knight R, Dorrestein PC.

BMC Biol. 2019 Jun 12;17(1):47. doi: 10.1186/s12915-019-0660-6.

4.

Mechanics and Dynamics of Bacterial Cell Lysis.

Wong F, Amir A.

Biophys J. 2019 Jun 18;116(12):2378-2389. doi: 10.1016/j.bpj.2019.04.040. Epub 2019 May 17.

PMID:
31174849
5.

Whole body ultrasound in the operating room and the intensive care unit.

Denault A, Canty D, Azzam M, Amir A, Gebhard CE.

Korean J Anesthesiol. 2019 Jun 4. doi: 10.4097/kja.19186. [Epub ahead of print]

6.

Synchronous Unicentric Castleman Disease and Inflammatory Hepatocellular Adenoma: a Case Report.

De Vito C, Papathomas G T, Pedica F, Kane P, Amir A, Heaton N, Quaglia A.

Ann Hepatol. 2019 Jan - Feb;18(1):263-268. doi: 10.5604/01.3001.0012.7936.

7.

Mechanisms of action of metformin with special reference to cardiovascular protection.

Zilov AV, Abdelaziz SI, AlShammary A, Al Zahrani A, Amir A, Assaad Khalil SH, Brand K, Elkafrawy N, Hassoun AAK, Jahed A, Jarrah N, Mrabeti S, Paruk I.

Diabetes Metab Res Rev. 2019 Apr 25:e3173. doi: 10.1002/dmrr.3173. [Epub ahead of print] Review.

PMID:
31021474
8.

Disrespect and abuse during facility-based childbirth and its sociodemographic determinants - A barrier to healthcare utilization in rural population.

Nawab T, Erum U, Amir A, Khalique N, Ansari MA, Chauhan A.

J Family Med Prim Care. 2019 Jan;8(1):239-245. doi: 10.4103/jfmpc.jfmpc_247_18.

9.

Ursodeoxycholic Acid Therapy in Pediatric Primary Sclerosing Cholangitis: Predictors of Gamma Glutamyltransferase Normalization and Favorable Clinical Course.

Deneau M, Perito E, Ricciuto A, Gupta N, Kamath BM, Palle S, Vitola B, Smolka V, Ferrari F, Amir AZ, Miloh T, Papadopoulou A, Mohan P, Mack C, Kolho KL, Iorio R, El-Matary W, Venkat V, Chan A, Saubermann L, Valentino PL, Shah U, Miethke A, Lin H, Jensen MK.

J Pediatr. 2019 Jun;209:92-96.e1. doi: 10.1016/j.jpeds.2019.01.039. Epub 2019 Mar 14.

PMID:
30878206
10.

Checklist of Fishes at Pergau Lake, Jeli, Kelantan, Malaysia.

Alias MIM, Hambali K, Amir A, Fauzi N, Hassin H, Yin SA.

Trop Life Sci Res. 2019 Jan;30(1):161-167. doi: 10.21315/tlsr2019.30.1.10. Epub 2019 Jan 31.

11.

Basolateral amygdala neurons are activated during threat expectation.

Amir A, Kyriazi P, Lee SC, Headley DB, Paré D.

J Neurophysiol. 2019 May 1;121(5):1761-1777. doi: 10.1152/jn.00807.2018. Epub 2019 Mar 6.

PMID:
30840520
12.

Plasmodium knowlesi exhibits distinct in vitro drug susceptibility profiles from those of Plasmodium falciparum.

van Schalkwyk DA, Blasco B, Davina Nuñez R, Liew JWK, Amir A, Lau YL, Leroy D, Moon RW, Sutherland CJ.

Int J Parasitol Drugs Drug Resist. 2019 Apr;9:93-99. doi: 10.1016/j.ijpddr.2019.02.004. Epub 2019 Feb 22.

13.

Optimal Segregation of Proteins: Phase Transitions and Symmetry Breaking.

Lin J, Min J, Amir A.

Phys Rev Lett. 2019 Feb 15;122(6):068101. doi: 10.1103/PhysRevLett.122.068101.

PMID:
30822081
14.

Gamma Oscillations in the Basolateral Amygdala: Biophysical Mechanisms and Computational Consequences.

Feng F, Headley DB, Amir A, Kanta V, Chen Z, Paré D, Nair SS.

eNeuro. 2019 Feb 5;6(1). pii: ENEURO.0388-18.2018. doi: 10.1523/ENEURO.0388-18.2018. eCollection 2019 Jan-Feb.

15.

Mechanics and dynamics of translocating MreB filaments on curved membranes.

Wong F, Garner EC, Amir A.

Elife. 2019 Feb 18;8. pii: e40472. doi: 10.7554/eLife.40472.

16.

Young Age Predicts Acute Pancreatitis Severity in Children.

Galai T, Cohen S, Yerushalmy-Feler A, Weintraub Y, Moran-Lev H, Amir AZ.

J Pediatr Gastroenterol Nutr. 2019 May;68(5):720-726. doi: 10.1097/MPG.0000000000002294.

PMID:
30747814
17.

In Silico Computations Of Selective Phytochemicals As Potential Inhibitors Against Major Biological Targets Of Diabetes Mellitus.

Akhtar A, Amir A, Hussain W, Ghaffar A, Rasool N.

Curr Comput Aided Drug Des. 2019 Jan 30. doi: 10.2174/1573409915666190130164923. [Epub ahead of print]

PMID:
30706825
18.

Calour: an Interactive, Microbe-Centric Analysis Tool.

Xu ZZ, Amir A, Sanders J, Zhu Q, Morton JT, Bletz MC, Tripathi A, Huang S, McDonald D, Jiang L, Knight R.

mSystems. 2019 Jan 29;4(1). pii: e00269-18. doi: 10.1128/mSystems.00269-18. eCollection 2019 Jan-Feb.

19.

The value of small mangrove patches.

Curnick DJ, Pettorelli N, Amir AA, Balke T, Barbier EB, Crooks S, Dahdouh-Guebas F, Duncan C, Endsor C, Friess DA, Quarto A, Zimmer M, Lee SY.

Science. 2019 Jan 18;363(6424):239. doi: 10.1126/science.aaw0809. No abstract available.

PMID:
30655434
20.

A systematic review protocol of stigma among children and adolescents with epilepsy.

Kirabira J, Forry JB, Kinengyere AA, Adriko W, Amir A, Rukundo GZ, Akena D.

Syst Rev. 2019 Jan 12;8(1):21. doi: 10.1186/s13643-019-0940-9.

21.

Prediabetes management in the Middle East, Africa and Russia: Current status and call for action.

Assaad Khalil SH, Abdelaziz SI, Al Shammary A, Al Zahrani A, Amir A, Elkafrawy N, Hassoun AA, Hostalek U, Jahed A, Jarrah N, Mrabeti S, Paruk I, Zilov AV.

Diab Vasc Dis Res. 2019 May;16(3):213-226. doi: 10.1177/1479164118819665. Epub 2019 Jan 3. Review.

PMID:
30606039
22.

Altered renal immune complexes deposition in female BWF1 lupus mice following Plasmodium chabaudi infection.

Abdel-Maksoud MA, Abdel-Ghaffar FA, El-Amir A, Badr G, Al-Quraishy S.

Saudi J Biol Sci. 2018 Dec;25(8):1609-1616. doi: 10.1016/j.sjbs.2016.05.015. Epub 2016 May 26.

23.

Erratum to: The sponge microbiome project.

Moitinho-Silva L, Nielsen S, Amir A, Gonzalez A, Ackermann GL, Cerrano C, Astudillo-Garcia C, Easson C, Sipkema D, Liu F, Steinert G, Kotoulas G, McCormack GP, Feng G, Bell JJ, Vicente J, Björk JR, Montoya JM, Olson JB, Reveillaud J, Steindler L, Pineda MC, Marra MV, Ilan M, Taylor MW, Polymenakou P, Erwin PM, Schupp PJ, Simister RL, Knight R, Thacker RW, Costa R, Hill RT, Lopez-Legentil S, Dailianis T, Ravasi T, Hentschel U, Li Z, Webster NS, Thomas T.

Gigascience. 2018 Dec 1;7(12). doi: 10.1093/gigascience/giy145. No abstract available.

24.

Spliceosomal introns in Trichomonas vaginalis revisited.

Wang SE, Amir AS, Nguyen T, Poole AM, Simoes-Barbosa A.

Parasit Vectors. 2018 Nov 27;11(1):607. doi: 10.1186/s13071-018-3196-7.

25.

Gamma Glutamyltransferase Reduction Is Associated With Favorable Outcomes in Pediatric Primary Sclerosing Cholangitis.

Deneau MR, Mack C, Abdou R, Amin M, Amir A, Auth M, Bazerbachi F, Marie Broderick A, Chan A, DiGuglielmo M, El-Matary W, El-Youssef M, Ferrari F, Furuya KN, Gottrand F, Gupta N, Homan M, Jensen MK, Kamath BM, Mo Kim K, Kolho KL, Konidari A, Koot B, Iorio R, Martinez M, Mohan P, Palle S, Papadopoulou A, Ricciuto A, Saubermann L, Sathya P, Shteyer E, Smolka V, Tanaka A, Valentino PL, Varier R, Venkat V, Vitola B, Vos MB, Woynarowski M, Yap J, Miloh T.

Hepatol Commun. 2018 Sep 25;2(11):1369-1378. doi: 10.1002/hep4.1251. eCollection 2018 Nov.

26.

Homeostasis of protein and mRNA concentrations in growing cells.

Lin J, Amir A.

Nat Commun. 2018 Oct 29;9(1):4496. doi: 10.1038/s41467-018-06714-z.

27.

Midline thalamic inputs to the amygdala: Ultrastructure and synaptic targets.

Amir A, Paré JF, Smith Y, Paré D.

J Comp Neurol. 2019 Apr 1;527(5):942-956. doi: 10.1002/cne.24557. Epub 2018 Dec 11.

PMID:
30311651
28.

Ultra-short Celiac Disease Is a Distinct and Milder Phenotype of the Disease in Children.

Doyev R, Cohen S, Ben-Tov A, Weintraub Y, Amir A, Galai T, Moran-Lev H, Yerushalmy-Feler A.

Dig Dis Sci. 2019 Jan;64(1):167-172. doi: 10.1007/s10620-018-5323-x. Epub 2018 Oct 11.

PMID:
30311150
29.

Parasitic infections, malnutrition and anemia among preschool children living in rural areas of Peshawar, Pakistan.

Din ZU, Pervez L, Amir A, Abbas M, Khan I, Iqbal Z, Iqbal M.

Nutr Hosp. 2018 Oct 5;35(5):1145-1152. doi: 10.20960/nh.1685.

30.

Genistein Loaded Nanofibers Protect Spinal Cord Tissue Following Experimental Injury in Rats.

Ismail M, Ibrahim S, El-Amir A, El-Rafei AM, Allam NK, Abdellatif A.

Biomedicines. 2018 Oct 4;6(4). pii: E96. doi: 10.3390/biomedicines6040096.

31.

Comparison of Oral Collection Methods for Studies of Microbiota.

Vogtmann E, Chen J, Kibriya MG, Amir A, Shi J, Chen Y, Islam T, Eunes M, Ahmed A, Naher J, Rahman A, Barmon B, Knight R, Chia N, Ahsan H, Abnet CC, Sinha R.

Cancer Epidemiol Biomarkers Prev. 2019 Jan;28(1):137-143. doi: 10.1158/1055-9965.EPI-18-0312. Epub 2018 Sep 27.

PMID:
30262598
32.

Considerations for using Natalizumab treatment in patients with a history of choroidal melanoma.

Kaye AE, Hawkes ED, Gout II, El-Amir AN, Neffendorf JE.

Mult Scler Relat Disord. 2018 Nov;26:74-76. doi: 10.1016/j.msard.2018.09.012. Epub 2018 Sep 12.

PMID:
30237107
33.

Microbial effects of livestock manure fertilization on freshwater aquaculture ponds rearing tilapia (Oreochromis shiranus) and North African catfish (Clarias gariepinus).

Minich JJ, Zhu Q, Xu ZZ, Amir A, Ngochera M, Simwaka M, Allen EE, Zidana H, Knight R.

Microbiologyopen. 2018 Dec;7(6):e00716. doi: 10.1002/mbo3.716. Epub 2018 Aug 31.

34.

Plasmodium knowlesi malaria: current research perspectives.

Amir A, Cheong FW, de Silva JR, Liew JWK, Lau YL.

Infect Drug Resist. 2018 Aug 10;11:1145-1155. doi: 10.2147/IDR.S148664. eCollection 2018. Review.

35.

EDoP Distance Between Sets of Incomplete Permutations: Application to Bacteria Classification Based on Gene Order.

Zhou X, Amir A, Guerra C, Landau G, Rossignac J.

J Comput Biol. 2018 Nov;25(11):1193-1202. doi: 10.1089/cmb.2018.0063. Epub 2018 Aug 16.

PMID:
30113868
36.

Lead Concentration in Long-Tailed Macaque (Macaca fascicularis) Hair in Kuala Selangor, Malaysia.

Hassim NA, Hambali K, Idris NSU, Amir A, Ismail A, Zulkifli SZ, Sow AY.

Trop Life Sci Res. 2018 Jul;29(2):175-186. doi: 10.21315/tlsr2018.29.2.12. Epub 2018 Jul 6.

37.

Energy-speed-accuracy relation in complex networks for biological discrimination.

Wong F, Amir A, Gunawardena J.

Phys Rev E. 2018 Jul;98(1-1):012420. doi: 10.1103/PhysRevE.98.012420.

PMID:
30110782
38.

Evolutionary trends in host physiology outweigh dietary niche in structuring primate gut microbiomes.

Amato KR, G Sanders J, Song SJ, Nute M, Metcalf JL, Thompson LR, Morton JT, Amir A, J McKenzie V, Humphrey G, Gogul G, Gaffney J, L Baden A, A O Britton G, P Cuozzo F, Di Fiore A, J Dominy N, L Goldberg T, Gomez A, Kowalewski MM, J Lewis R, Link A, L Sauther M, Tecot S, A White B, E Nelson K, M Stumpf R, Knight R, R Leigh S.

ISME J. 2019 Mar;13(3):576-587. doi: 10.1038/s41396-018-0175-0. Epub 2018 Jul 11.

PMID:
29995839
39.

Adverse eating behavior and its association with obesity in Indian adolescents: Evidence from a nonmetropolitan city in India.

Faizi N, Shah MS, Ahmad A, Ansari MA, Amir A, Khalique N.

J Family Med Prim Care. 2018 Jan-Feb;7(1):198-204. doi: 10.4103/jfmpc.jfmpc_139_17.

40.

High and low body mass index may predict severe disease course in children with inflammatory bowel disease.

Yerushalmy-Feler A, Ben-Tov A, Weintraub Y, Amir A, Galai T, Moran-Lev H, Cohen S.

Scand J Gastroenterol. 2018 Jun;53(6):708-713. doi: 10.1080/00365521.2018.1464595. Epub 2018 Apr 24.

PMID:
29688090
41.

KatharoSeq Enables High-Throughput Microbiome Analysis from Low-Biomass Samples.

Minich JJ, Zhu Q, Janssen S, Hendrickson R, Amir A, Vetter R, Hyde J, Doty MM, Stillwell K, Benardini J, Kim JH, Allen EE, Venkateswaran K, Knight R.

mSystems. 2018 Mar 13;3(3). pii: e00218-17. doi: 10.1128/mSystems.00218-17. eCollection 2018 May-Jun.

42.

Mitigate risk for Malaysia's mangroves.

Amir AA.

Science. 2018 Mar 23;359(6382):1342-1343. doi: 10.1126/science.aas9139. No abstract available.

PMID:
29567699
43.

Learning from Noise: How Observing Stochasticity May Aid Microbiology.

Amir A, Balaban NQ.

Trends Microbiol. 2018 Apr;26(4):376-385. doi: 10.1016/j.tim.2018.02.003. Epub 2018 Mar 9. Review.

PMID:
29526404
44.

Modeling Cell Size Regulation: From Single-Cell-Level Statistics to Molecular Mechanisms and Population-Level Effects.

Ho PY, Lin J, Amir A.

Annu Rev Biophys. 2018 May 20;47:251-271. doi: 10.1146/annurev-biophys-070317-032955. Epub 2018 Mar 8. Review.

PMID:
29517919
45.

Reduced red blood cell deformability in Plasmodium knowlesi malaria.

Barber BE, Russell B, Grigg MJ, Zhang R, William T, Amir A, Lau YL, Chatfield MD, Dondorp AM, Anstey NM, Yeo TW.

Blood Adv. 2018 Feb 27;2(4):433-443. doi: 10.1182/bloodadvances.2017013730.

46.

MreB filaments align along greatest principal membrane curvature to orient cell wall synthesis.

Hussain S, Wivagg CN, Szwedziak P, Wong F, Schaefer K, Izoré T, Renner LD, Holmes MJ, Sun Y, Bisson-Filho AW, Walker S, Amir A, Löwe J, Garner EC.

Elife. 2018 Feb 22;7. pii: e32471. doi: 10.7554/eLife.32471.

47.

Phyto-oestrogens affect fertilisation and embryo development in vitro in sheep.

Amir AA, Kelly JM, Kleemann DO, Durmic Z, Blache D, Martin GB.

Reprod Fertil Dev. 2018 Jul;30(8):1109-1115. doi: 10.1071/RD16481.

PMID:
29448974
48.

Vigilance-Associated Gamma Oscillations Coordinate the Ensemble Activity of Basolateral Amygdala Neurons.

Amir A, Headley DB, Lee SC, Haufler D, Paré D.

Neuron. 2018 Feb 7;97(3):656-669.e7. doi: 10.1016/j.neuron.2017.12.035.

49.

Gluten-free diet may improve obstructive sleep apnea-related symptoms in children with celiac disease.

Yerushalmy-Feler A, Tauman R, Derowe A, Averbuch E, Ben-Tov A, Weintraub Y, Weiner D, Amir A, Moran-Lev H, Cohen S.

BMC Pediatr. 2018 Feb 7;18(1):35. doi: 10.1186/s12887-018-1039-5.

50.

Gut Microbiota Offers Universal Biomarkers across Ethnicity in Inflammatory Bowel Disease Diagnosis and Infliximab Response Prediction.

Zhou Y, Xu ZZ, He Y, Yang Y, Liu L, Lin Q, Nie Y, Li M, Zhi F, Liu S, Amir A, González A, Tripathi A, Chen M, Wu GD, Knight R, Zhou H, Chen Y.

mSystems. 2018 Jan 30;3(1). pii: e00188-17. doi: 10.1128/mSystems.00188-17. eCollection 2018 Jan-Feb.

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