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Items: 9

1.

Advances in genetics toward identifying pathogenic cell states of rheumatoid arthritis.

Amariuta T, Luo Y, Knevel R, Okada Y, Raychaudhuri S.

Immunol Rev. 2019 Nov 28. doi: 10.1111/imr.12827. [Epub ahead of print] Review.

PMID:
31782165
2.

Annotations capturing cell-type-specific TF binding explain a large fraction of disease heritability.

van de Geijn B, Finucane H, Gazal S, Hormozdiari F, Amariuta T, Liu X, Gusev A, Loh PR, Reshef Y, Kichaev G, Raychauduri S, Price AL.

Hum Mol Genet. 2019 Oct 9. pii: ddz226. doi: 10.1093/hmg/ddz226. [Epub ahead of print]

PMID:
31595288
3.

Early progression to active tuberculosis is a highly heritable trait driven by 3q23 in Peruvians.

Luo Y, Suliman S, Asgari S, Amariuta T, Baglaenko Y, Martínez-Bonet M, Ishigaki K, Gutierrez-Arcelus M, Calderon R, Lecca L, León SR, Jimenez J, Yataco R, Contreras C, Galea JT, Becerra M, Nejentsev S, Nigrovic PA, Moody DB, Murray MB, Raychaudhuri S.

Nat Commun. 2019 Aug 21;10(1):3765. doi: 10.1038/s41467-019-11664-1.

4.

Benchmarker: An Unbiased, Association-Data-Driven Strategy to Evaluate Gene Prioritization Algorithms.

Fine RS, Pers TH, Amariuta T, Raychaudhuri S, Hirschhorn JN.

Am J Hum Genet. 2019 Jun 6;104(6):1025-1039. doi: 10.1016/j.ajhg.2019.03.027. Epub 2019 May 2.

PMID:
31056107
5.

Genes with High Network Connectivity Are Enriched for Disease Heritability.

Kim SS, Dai C, Hormozdiari F, van de Geijn B, Gazal S, Park Y, O'Connor L, Amariuta T, Loh PR, Finucane H, Raychaudhuri S, Price AL.

Am J Hum Genet. 2019 May 2;104(5):896-913. doi: 10.1016/j.ajhg.2019.03.020.

6.

IMPACT: Genomic Annotation of Cell-State-Specific Regulatory Elements Inferred from the Epigenome of Bound Transcription Factors.

Amariuta T, Luo Y, Gazal S, Davenport EE, van de Geijn B, Ishigaki K, Westra HJ, Teslovich N, Okada Y, Yamamoto K; RACI Consortium, GARNET Consortium, Price AL, Raychaudhuri S.

Am J Hum Genet. 2019 May 2;104(5):879-895. doi: 10.1016/j.ajhg.2019.03.012. Epub 2019 Apr 18.

7.

Discovering in vivo cytokine-eQTL interactions from a lupus clinical trial.

Davenport EE, Amariuta T, Gutierrez-Arcelus M, Slowikowski K, Westra HJ, Luo Y, Shen C, Rao DA, Zhang Y, Pearson S, von Schack D, Beebe JS, Bing N, John S, Vincent MS, Zhang B, Raychaudhuri S.

Genome Biol. 2018 Oct 19;19(1):168. doi: 10.1186/s13059-018-1560-8.

8.

Systems proteomics of liver mitochondria function.

Williams EG, Wu Y, Jha P, Dubuis S, Blattmann P, Argmann CA, Houten SM, Amariuta T, Wolski W, Zamboni N, Aebersold R, Auwerx J.

Science. 2016 Jun 10;352(6291):aad0189. doi: 10.1126/science.aad0189.

9.

Two-dimensional IR spectroscopy of the anti-HIV agent KP1212 reveals protonated and neutral tautomers that influence pH-dependent mutagenicity.

Peng CS, Fedeles BI, Singh V, Li D, Amariuta T, Essigmann JM, Tokmakoff A.

Proc Natl Acad Sci U S A. 2015 Mar 17;112(11):3229-34. doi: 10.1073/pnas.1415974112. Epub 2015 Mar 2.

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