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Items: 32

1.
2.

Binding studies of a putative C. pseudotuberculosis target protein from Vitamin B12 Metabolism.

Peinado RDS, Olivier DS, Eberle RJ, de Moraes FR, Amaral MS, Arni RK, Coronado MA.

Sci Rep. 2019 Apr 23;9(1):6350. doi: 10.1038/s41598-019-42935-y.

3.

Virulence-Related Genes and Coenteropathogens Associated with Clinical Outcomes of Enteropathogenic Escherichia coli Infections in Children from the Brazilian Semiarid Region: a Case-Control Study of Diarrhea.

Santos AKS, de Medeiros PHQS, Bona MD, Prata MMG, Amaral MSMG, Veras HN, Pankov RC, Ribeiro SA, Cavalcante PA, Freitas TM, Gondim RDG, de Oliveira DMN, Melo NKFM, Havt A, Lima AAM.

J Clin Microbiol. 2019 Mar 28;57(4). pii: e01777-18. doi: 10.1128/JCM.01777-18. Print 2019 Apr.

PMID:
30728193
4.

Inhibition of histone methyltransferase EZH2 in Schistosoma mansoni in vitro by GSK343 reduces egg laying and decreases the expression of genes implicated in DNA replication and noncoding RNA metabolism.

Pereira ASA, Amaral MS, Vasconcelos EJR, Pires DS, Asif H, daSilva LF, Morales-Vicente DA, Carneiro VC, Angeli CB, Palmisano G, Fantappie MR, Pierce RJ, Setubal JC, Verjovski-Almeida S.

PLoS Negl Trop Dis. 2018 Oct 26;12(10):e0006873. doi: 10.1371/journal.pntd.0006873. eCollection 2018 Oct.

5.

Modeling and molecular dynamics indicate that snake venom phospholipase B-like enzymes are Ntn-hydrolases.

Coronado MA, da Silva Olivier D, Eberle RJ, do Amaral MS, Arni RK.

Toxicon. 2018 Oct;153:106-113. doi: 10.1016/j.toxicon.2018.08.014. Epub 2018 Sep 1. Review.

PMID:
30179630
6.

Redox potential replica exchange molecular dynamics at constant pH in AMBER: Implementation and validation.

Cruzeiro VWD, Amaral MS, Roitberg AE.

J Chem Phys. 2018 Aug 21;149(7):072338. doi: 10.1063/1.5027379.

PMID:
30134669
7.

Intestinal cell migration damage induced by enteropathogenic Escherichia coli strains.

Cavalcante PA, Prata MMG, Medeiros PHQS, Alves da Silva AV, Quetz JS, Reyes MAV, Rodrigues TS, Santos AKS, Ribeiro SA, Veras HN, Bona MD, Amaral MSMG, Rodrigues FAP, Lima IFN, Havt A, Lima AAM.

Braz J Med Biol Res. 2018 Jul 26;51(10):e7423. doi: 10.1590/1414-431X20187423.

8.

Campylobacter jejuni virulence genes and immune-inflammatory biomarkers association with growth impairment in children from Northeastern Brazil.

do Nascimento Veras H, Medeiros PHQS, Ribeiro SA, Freitas TM, Santos AKS, Amaral MSMG, Bona MD, Havt A, Lima IFN, Lima NL, Di Moura A, Leite ÁM, Soares AM, Filho JQ, Guerrant RL, Lima AAM.

Eur J Clin Microbiol Infect Dis. 2018 Oct;37(10):2011-2020. doi: 10.1007/s10096-018-3337-0. Epub 2018 Jul 26.

PMID:
30051355
9.

Atlas of Schistosoma mansoni long non-coding RNAs and their expression correlation to protein-coding genes.

Vasconcelos EJR, Mesel VC, daSilva LF, Pires DS, Lavezzo GM, Pereira ASA, Amaral MS, Verjovski-Almeida S.

Database (Oxford). 2018 Jan 1;2018. doi: 10.1093/database/bay068.

10.

Inhibition of thioredoxin A1 from Corynebacterium pseudotuberculosis by polyanions and flavonoids.

Eberle RJ, Kawai LA, de Moraes FR, Olivier D, do Amaral MS, Tasic L, Arni RK, Coronado MA.

Int J Biol Macromol. 2018 Oct 1;117:1066-1073. doi: 10.1016/j.ijbiomac.2018.06.022. Epub 2018 Jun 7.

PMID:
29885395
11.

Chromatin Landscape Distinguishes the Genomic Loci of Hundreds of Androgen-Receptor-Associated LincRNAs From the Loci of Non-associated LincRNAs.

daSilva LF, Beckedorff FC, Ayupe AC, Amaral MS, Mesel V, Videira A, Reis EM, Setubal JC, Verjovski-Almeida S.

Front Genet. 2018 Apr 25;9:132. doi: 10.3389/fgene.2018.00132. eCollection 2018.

12.

Publisher Correction: Discordant congenital Zika syndrome twins show differential in vitro viral susceptibility of neural progenitor cells.

Caires-Júnior LC, Goulart E, Melo US, Araujo BHS, Alvizi L, Soares-Schanoski A, de Oliveira DF, Kobayashi GS, Griesi-Oliveira K, Musso CM, Amaral MS, daSilva LF, Astray RM, Suárez-Patiño SF, Ventini DC, da Silva SG, Yamamoto GL, Ezquina S, Naslavsky MS, Telles-Silva KA, Weinmann K, van der Linden V, van der Linden H, de Oliveira JRM, Arrais NMR, Melo A, Figueiredo T, Santos S, Meira JGC, Passos SD, de Almeida RP, Bispo AJB, Cavalheiro EA, Kalil J, Cunha-Neto E, Nakaya H, Andreata-Santos R, de Souza Ferreira LC, Verjovski-Almeida S, Ho PL, Passos-Bueno MR, Zatz M.

Nat Commun. 2018 Mar 13;9(1):1114. doi: 10.1038/s41467-018-03497-1.

13.

Cochlear implant revision surgeries in children.

Amaral MSAD, Reis ACMB, Massuda ET, Hyppolito MA.

Braz J Otorhinolaryngol. 2019 May - Jun;85(3):290-296. doi: 10.1016/j.bjorl.2018.01.003. Epub 2018 Feb 16.

14.

Normal boundary intersection applied as multivariate and multiobjective optimization in the treatment of amoxicillin synthetic solution.

Moura D, Barcelos V, Samanamud GRL, França AB, Lofrano R, Loures CCA, Naves LLR, Amaral MS, Naves FL.

Environ Monit Assess. 2018 Feb 14;190(3):140. doi: 10.1007/s10661-018-6523-8.

PMID:
29445954
15.

Discordant congenital Zika syndrome twins show differential in vitro viral susceptibility of neural progenitor cells.

Caires-Júnior LC, Goulart E, Melo US, Araujo BHS, Alvizi L, Soares-Schanoski A, de Oliveira DF, Kobayashi GS, Griesi-Oliveira K, Musso CM, Amaral MS, daSilva LF, Astray RM, Suárez-Patiño SF, Ventini DC, Gomes da Silva S, Yamamoto GL, Ezquina S, Naslavsky MS, Telles-Silva KA, Weinmann K, van der Linden V, van der Linden H, de Oliveira JRM, Arrais NMR, Melo A, Figueiredo T, Santos S, Meira JGC, Passos SD, de Almeida RP, Bispo AJB, Cavalheiro EA, Kalil J, Cunha-Neto E, Nakaya H, Andreata-Santos R, de Souza Ferreira LC, Verjovski-Almeida S, Ho PL, Passos-Bueno MR, Zatz M.

Nat Commun. 2018 Feb 2;9(1):475. doi: 10.1038/s41467-017-02790-9. Erratum in: Nat Commun. 2018 Mar 13;9(1):1114.

16.

Ionic liquid capillary columns for analysis of multi-component volatiles by gas chromatography-mass spectrometry: performance, selectivity, activity and retention indices.

Amaral MSS, Marriott PJ, Bizzo HR, Rezende CM.

Anal Bioanal Chem. 2018 Jul;410(19):4615-4632. doi: 10.1007/s00216-017-0718-7. Epub 2017 Nov 10.

PMID:
29127462
17.

Is there a best side for cochlear implants in post-lingual patients?

Amaral MSAD, Damico TA, Gonçales AS, Reis ACMB, Isaac ML, Massuda ET, Hyppolito MA.

Braz J Otorhinolaryngol. 2018 Sep - Oct;84(5):560-565. doi: 10.1016/j.bjorl.2017.06.012. Epub 2017 Jul 29.

18.

The Schistosoma mansoni genome encodes thousands of long non-coding RNAs predicted to be functional at different parasite life-cycle stages.

Vasconcelos EJR, daSilva LF, Pires DS, Lavezzo GM, Pereira ASA, Amaral MS, Verjovski-Almeida S.

Sci Rep. 2017 Sep 5;7(1):10508. doi: 10.1038/s41598-017-10853-6.

19.

Prevalence and virulence gene profiling of enteroaggregative Escherichia coli in malnourished and nourished Brazilian children.

Havt A, Lima IF, Medeiros PH, Clementino MA, Santos AK, Amaral MS, Veras HN, Prata MM, Lima NL, Di Moura A, Leite ÁM, Soares AM, Filho JQ, Houpt ER, Nataro JP, Guerrant RL, Lima AA.

Diagn Microbiol Infect Dis. 2017 Oct;89(2):98-105. doi: 10.1016/j.diagmicrobio.2017.06.024. Epub 2017 Jul 4.

20.

Retraction: Long non-coding RNA INXS is a critical mediator of BCL-XS induced apoptosis.

DeOcesano-Pereira C, Amaral MS, Parreira KS, Ayupe AC, Jacysyn JF, Amarante-Mendes GP, Reis EM, Verjovski-Almeida S.

Nucleic Acids Res. 2016 Nov 2;44(19):9518. Epub 2016 Aug 9. No abstract available.

21.

A Critical Review of Properties and Analytical Methods for the Determination of Oxytetracyline in Biological and Pharmaceutical Matrices.

Sversut RA, da Silva AA, Cardoso TF, Kassab NM, do Amaral MS, Salgado HR.

Crit Rev Anal Chem. 2017 Mar 4;47(2):154-171. doi: 10.1080/10408347.2016.1236673. Epub 2016 Sep 20. Review. Erratum in: Crit Rev Anal Chem. 2018 May 4;48(3):237.

PMID:
27650368
22.

Schistosoma mansoni Egg, Adult Male and Female Comparative Gene Expression Analysis and Identification of Novel Genes by RNA-Seq.

Anderson L, Amaral MS, Beckedorff F, Silva LF, Dazzani B, Oliveira KC, Almeida GT, Gomes MR, Pires DS, Setubal JC, DeMarco R, Verjovski-Almeida S.

PLoS Negl Trop Dis. 2015 Dec 31;9(12):e0004334. doi: 10.1371/journal.pntd.0004334. eCollection 2015 Dec.

23.

[Not Available].

Santos JF, Amaral MS, Oliveira SL, Barbosa JP, Cabral CR Jr, Melo IS, Bueno NB, Freitas JD, Sant'ana AG, Ataíde TR.

Nutr Hosp. 2015;32(3):1399. No abstract available.

PMID:
26543930
24.

The prevalence of norovirus, astrovirus and adenovirus infections among hospitalised children with acute gastroenteritis in Porto Velho, state of Rondônia, western Brazilian Amazon.

Amaral MS, Estevam GK, Penatti M, Lafontaine R, Lima IC, Spada PK, Gabbay YB, Matos NB.

Mem Inst Oswaldo Cruz. 2015 Apr;110(2):215-21. doi: 10.1590/0074-02760140381. Epub 2015 Mar 6.

25.

Long non-coding RNA INXS is a critical mediator of BCL-XS induced apoptosis.

DeOcesano-Pereira C, Amaral MS, Parreira KS, Ayupe AC, Jacysyn JF, Amarante-Mendes GP, Reis EM, Verjovski-Almeida S.

Nucleic Acids Res. 2014 Jul;42(13):8343-55. doi: 10.1093/nar/gku561. Epub 2014 Jul 3. Retraction in: Nucleic Acids Res. 2016 Nov 2;44(19):9518.

26.

Signal-tuned Gabor functions as models for stimulus-dependent cortical receptive fields.

Torreão JR, Victer SM, Amaral MS.

Neural Comput. 2014 May;26(5):920-52. doi: 10.1162/NECO_a_00581. Epub 2014 Feb 20.

PMID:
24555452
27.

The intronic long noncoding RNA ANRASSF1 recruits PRC2 to the RASSF1A promoter, reducing the expression of RASSF1A and increasing cell proliferation.

Beckedorff FC, Ayupe AC, Crocci-Souza R, Amaral MS, Nakaya HI, Soltys DT, Menck CF, Reis EM, Verjovski-Almeida S.

PLoS Genet. 2013;9(8):e1003705. doi: 10.1371/journal.pgen.1003705. Epub 2013 Aug 22.

28.

Long non-coding RNAs and their implications in cancer epigenetics.

Beckedorff FC, Amaral MS, Deocesano-Pereira C, Verjovski-Almeida S.

Biosci Rep. 2013 Aug 30;33(4). pii: e00061. doi: 10.1042/BSR20130054. Review.

29.

Use of linseed oil to treat experimentally induced keratoconjunctivitis sicca in rabbits.

Neves ML, Yamasaki L, Sanches Ode C, do Amaral MS, Stevanin H, Giuffrida R, Candido ER, Góes JE, Zulim LF, Schweigert A, Fukui RM, Meirelles CC, Sasaki CA, Andrade SF.

J Ophthalmic Inflamm Infect. 2013 Jan 3;3(1):4. doi: 10.1186/1869-5760-3-4.

30.

Exploring the Schistosoma mansoni adult male transcriptome using RNA-seq.

Almeida GT, Amaral MS, Beckedorff FC, Kitajima JP, DeMarco R, Verjovski-Almeida S.

Exp Parasitol. 2012 Sep;132(1):22-31. doi: 10.1016/j.exppara.2011.06.010. Epub 2011 Jul 2.

31.

A diaryl sulfide, sulfoxide, and sulfone bearing structural similarities to combretastatin A-4.

Barbosa EG, Bega LA, Beatriz A, Sarkar T, Hamel E, do Amaral MS, de Lima DP.

Eur J Med Chem. 2009 Jun;44(6):2685-8. doi: 10.1016/j.ejmech.2008.12.018. Epub 2008 Dec 25.

32.

Causes of low vision and use of optical aids in the elderly.

Carvalho KM, Monteiro GB, Isaac CR, Shiroma LO, Amaral MS.

Rev Hosp Clin Fac Med Sao Paulo. 2004 Aug;59(4):157-60. Epub 2004 Sep 9.

PMID:
15361978

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