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Items: 46

1.

Muscle precursor cell movements in zebrafish are dynamic and require Six family genes.

Talbot JC, Teets EM, Ratnayake D, Duy PQ, Currie PD, Amacher SL.

Development. 2019 May 15;146(10). pii: dev171421. doi: 10.1242/dev.171421.

PMID:
31023879
2.

Guidelines for morpholino use in zebrafish.

Stainier DYR, Raz E, Lawson ND, Ekker SC, Burdine RD, Eisen JS, Ingham PW, Schulte-Merker S, Yelon D, Weinstein BM, Mullins MC, Wilson SW, Ramakrishnan L, Amacher SL, Neuhauss SCF, Meng A, Mochizuki N, Panula P, Moens CB.

PLoS Genet. 2017 Oct 19;13(10):e1007000. doi: 10.1371/journal.pgen.1007000. eCollection 2017 Oct. No abstract available.

3.

tbx6l and tbx16 are redundantly required for posterior paraxial mesoderm formation during zebrafish embryogenesis.

Morrow ZT, Maxwell AM, Hoshijima K, Talbot JC, Grunwald DJ, Amacher SL.

Dev Dyn. 2017 Oct;246(10):759-769. doi: 10.1002/dvdy.24547. Epub 2017 Aug 30.

4.

Pnrc2 regulates 3'UTR-mediated decay of segmentation clock-associated transcripts during zebrafish segmentation.

Gallagher TL, Tietz KT, Morrow ZT, McCammon JM, Goldrich ML, Derr NL, Amacher SL.

Dev Biol. 2017 Sep 1;429(1):225-239. doi: 10.1016/j.ydbio.2017.06.024. Epub 2017 Jun 23.

5.

Satellite-like cells contribute to pax7-dependent skeletal muscle repair in adult zebrafish.

Berberoglu MA, Gallagher TL, Morrow ZT, Talbot JC, Hromowyk KJ, Tenente IM, Langenau DM, Amacher SL.

Dev Biol. 2017 Apr 15;424(2):162-180. doi: 10.1016/j.ydbio.2017.03.004. Epub 2017 Mar 7.

6.

Muscular dystrophy modeling in zebrafish.

Li M, Hromowyk KJ, Amacher SL, Currie PD.

Methods Cell Biol. 2017;138:347-380. doi: 10.1016/bs.mcb.2016.11.004. Epub 2016 Dec 29. Review.

PMID:
28129852
7.

Iterative use of nuclear receptor Nr5a2 regulates multiple stages of liver and pancreas development.

Nissim S, Weeks O, Talbot JC, Hedgepeth JW, Wucherpfennig J, Schatzman-Bone S, Swinburne I, Cortes M, Alexa K, Megason S, North TE, Amacher SL, Goessling W.

Dev Biol. 2016 Oct 1;418(1):108-123. doi: 10.1016/j.ydbio.2016.07.019. Epub 2016 Jul 26.

8.

Pharyngeal morphogenesis requires fras1-itga8-dependent epithelial-mesenchymal interaction.

Talbot JC, Nichols JT, Yan YL, Leonard IF, BreMiller RA, Amacher SL, Postlethwait JH, Kimmel CB.

Dev Biol. 2016 Aug 1;416(1):136-148. doi: 10.1016/j.ydbio.2016.05.035. Epub 2016 Jun 2.

9.

In vivo assessment of contractile strength distinguishes differential gene function in skeletal muscle of zebrafish larvae.

Martin BL, Gallagher TL, Rastogi N, Davis JP, Beattie CE, Amacher SL, Janssen PM.

J Appl Physiol (1985). 2015 Oct 1;119(7):799-806. doi: 10.1152/japplphysiol.00447.2015. Epub 2015 Aug 6.

10.

Dynamics of the slowing segmentation clock reveal alternating two-segment periodicity.

Shih NP, François P, Delaune EA, Amacher SL.

Development. 2015 May 15;142(10):1785-93. doi: 10.1242/dev.119057.

11.

A streamlined CRISPR pipeline to reliably generate zebrafish frameshifting alleles.

Talbot JC, Amacher SL.

Zebrafish. 2014 Dec;11(6):583-5. doi: 10.1089/zeb.2014.1047. No abstract available.

12.

A visualizable chain-terminating inhibitor of glycosaminoglycan biosynthesis in developing zebrafish.

Beahm BJ, Dehnert KW, Derr NL, Kuhn J, Eberhart JK, Spillmann D, Amacher SL, Bertozzi CR.

Angew Chem Int Ed Engl. 2014 Mar 24;53(13):3347-52. doi: 10.1002/anie.201310569. Epub 2014 Feb 19.

13.

[A technical breakthrough for understanding segmentation clock dynamics and synchrony].

Delaune EA, François P, Shih NP, Amacher SL.

Med Sci (Paris). 2013 Apr;29(4):355-8. doi: 10.1051/medsci/2013294007. Epub 2013 Apr 26. French. No abstract available.

14.

The differentiation and movement of presomitic mesoderm progenitor cells are controlled by Mesogenin 1.

Fior R, Maxwell AA, Ma TP, Vezzaro A, Moens CB, Amacher SL, Lewis J, Saúde L.

Development. 2012 Dec;139(24):4656-65. doi: 10.1242/dev.078923.

15.

Single-cell-resolution imaging of the impact of Notch signaling and mitosis on segmentation clock dynamics.

Delaune EA, François P, Shih NP, Amacher SL.

Dev Cell. 2012 Nov 13;23(5):995-1005. doi: 10.1016/j.devcel.2012.09.009.

16.

Deep intron elements mediate nested splicing events at consecutive AG dinucleotides to regulate alternative 3' splice site choice in vertebrate 4.1 genes.

Parra MK, Gallagher TL, Amacher SL, Mohandas N, Conboy JG.

Mol Cell Biol. 2012 Jun;32(11):2044-53. doi: 10.1128/MCB.05716-11. Epub 2012 Apr 2.

17.

Imaging the sialome during zebrafish development with copper-free click chemistry.

Dehnert KW, Baskin JM, Laughlin ST, Beahm BJ, Naidu NN, Amacher SL, Bertozzi CR.

Chembiochem. 2012 Feb 13;13(3):353-7. doi: 10.1002/cbic.201100649. Epub 2012 Jan 20.

18.

Rbfox-regulated alternative splicing is critical for zebrafish cardiac and skeletal muscle functions.

Gallagher TL, Arribere JA, Geurts PA, Exner CR, McDonald KL, Dill KK, Marr HL, Adkar SS, Garnett AT, Amacher SL, Conboy JG.

Dev Biol. 2011 Nov 15;359(2):251-61. doi: 10.1016/j.ydbio.2011.08.025. Epub 2011 Sep 7.

19.

Inducing high rates of targeted mutagenesis in zebrafish using zinc finger nucleases (ZFNs).

McCammon JM, Doyon Y, Amacher SL.

Methods Mol Biol. 2011;770:505-27. doi: 10.1007/978-1-61779-210-6_20.

PMID:
21805278
20.

Metabolic labeling of fucosylated glycans in developing zebrafish.

Dehnert KW, Beahm BJ, Huynh TT, Baskin JM, Laughlin ST, Wang W, Wu P, Amacher SL, Bertozzi CR.

ACS Chem Biol. 2011 Jun 17;6(6):547-52. doi: 10.1021/cb100284d. Epub 2011 Apr 5.

21.

Using zinc finger nucleases for efficient and heritable gene disruption in zebrafish.

McCammon JM, Amacher SL.

Methods Mol Biol. 2010;649:281-98. doi: 10.1007/978-1-60761-753-2_18.

PMID:
20680842
22.

Visualizing enveloping layer glycans during zebrafish early embryogenesis.

Baskin JM, Dehnert KW, Laughlin ST, Amacher SL, Bertozzi CR.

Proc Natl Acad Sci U S A. 2010 Jun 8;107(23):10360-5. doi: 10.1073/pnas.0912081107. Epub 2010 May 20.

23.

Identification of direct T-box target genes in the developing zebrafish mesoderm.

Garnett AT, Han TM, Gilchrist MJ, Smith JC, Eisen MB, Wardle FC, Amacher SL.

Development. 2009 Mar;136(5):749-60. doi: 10.1242/dev.024703. Epub 2009 Jan 21.

24.

Emerging gene knockout technology in zebrafish: zinc-finger nucleases.

Amacher SL.

Brief Funct Genomic Proteomic. 2008 Nov;7(6):460-4. doi: 10.1093/bfgp/eln043.

25.

Heritable targeted gene disruption in zebrafish using designed zinc-finger nucleases.

Doyon Y, McCammon JM, Miller JC, Faraji F, Ngo C, Katibah GE, Amora R, Hocking TD, Zhang L, Rebar EJ, Gregory PD, Urnov FD, Amacher SL.

Nat Biotechnol. 2008 Jun;26(6):702-8. doi: 10.1038/nbt1409. Epub 2008 May 25.

26.

In vivo imaging of membrane-associated glycans in developing zebrafish.

Laughlin ST, Baskin JM, Amacher SL, Bertozzi CR.

Science. 2008 May 2;320(5876):664-7. doi: 10.1126/science.1155106.

27.

A web based resource characterizing the zebrafish developmental profile of over 16,000 transcripts.

Ouyang M, Garnett AT, Han TM, Hama K, Lee A, Deng Y, Lee N, Liu HY, Amacher SL, Farber SA, Ho SY.

Gene Expr Patterns. 2008 Feb;8(3):171-80. Epub 2007 Nov 7.

28.

Control of morphogenetic cell movements in the early zebrafish myotome.

Daggett DF, Domingo CR, Currie PD, Amacher SL.

Dev Biol. 2007 Sep 15;309(2):169-79. Epub 2007 Jun 16.

29.
30.

Interactions between muscle fibers and segment boundaries in zebrafish.

Henry CA, McNulty IM, Durst WA, Munchel SE, Amacher SL.

Dev Biol. 2005 Nov 15;287(2):346-60. Epub 2005 Oct 12.

31.
32.

Developmentally restricted actin-regulatory molecules control morphogenetic cell movements in the zebrafish gastrula.

Daggett DF, Boyd CA, Gautier P, Bryson-Richardson RJ, Thisse C, Thisse B, Amacher SL, Currie PD.

Curr Biol. 2004 Sep 21;14(18):1632-8.

33.

Somitogenesis.

Brennan C, Amacher SL, Currie PD.

Results Probl Cell Differ. 2002;40:271-97. Review. No abstract available.

PMID:
12353481
34.

Two linked hairy/Enhancer of split-related zebrafish genes, her1 and her7, function together to refine alternating somite boundaries.

Henry CA, Urban MK, Dill KK, Merlie JP, Page MF, Kimmel CB, Amacher SL.

Development. 2002 Aug;129(15):3693-704.

35.
36.

Zebrafish deadly seven functions in neurogenesis.

Gray M, Moens CB, Amacher SL, Eisen JS, Beattie CE.

Dev Biol. 2001 Sep 15;237(2):306-23.

37.

Transcriptional regulation during zebrafish embryogenesis.

Amacher SL.

Curr Opin Genet Dev. 1999 Oct;9(5):548-52. Review.

PMID:
10508700
38.

Zebrafish paraxial protocadherin is a downstream target of spadetail involved in morphogenesis of gastrula mesoderm.

Yamamoto A, Amacher SL, Kim SH, Geissert D, Kimmel CB, De Robertis EM.

Development. 1998 Sep;125(17):3389-97.

39.

Molecular identification of spadetail: regulation of zebrafish trunk and tail mesoderm formation by T-box genes.

Griffin KJ, Amacher SL, Kimmel CB, Kimelman D.

Development. 1998 Sep;125(17):3379-88.

40.
41.

Genetic interactions in zebrafish midline development.

Halpern ME, Hatta K, Amacher SL, Talbot WS, Yan YL, Thisse B, Thisse C, Postlethwait JH, Kimmel CB.

Dev Biol. 1997 Jul 15;187(2):154-70.

42.

Loss of cerebum function ventralizes the zebrafish embryo.

Fisher S, Amacher SL, Halpern ME.

Development. 1997 Apr;124(7):1301-11.

43.
44.
45.

Thrombospondin gene expression is associated with mitogenesis in 3T3 cells: induction by basic fibroblast growth factor.

Donoviel DB, Amacher SL, Judge KW, Bornstein P.

J Cell Physiol. 1990 Oct;145(1):16-23.

PMID:
2211838
46.

Glucocorticoid-regulated and constitutive trafficking of proteolytically processed cell surface-associated glycoproteins in wild type and variant rat hepatoma cells.

Amacher SL, Goodman LJ, Bravo DA, Wong KY, Goldfine ID, Hawley DM, Firestone GL.

Mol Endocrinol. 1989 Oct;3(10):1634-42.

PMID:
2558298

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