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Microbiome signatures in prostate cancer.

Banerjee S, Alwine JC, Wei Z, Tian T, Shih N, Sperling C, Guzzo T, Feldman MD, Robertson ES.

Carcinogenesis. 2019 Jul 6;40(6):749-764. doi: 10.1093/carcin/bgz008.


Distinct Microbial Signatures Associated With Different Breast Cancer Types.

Banerjee S, Tian T, Wei Z, Shih N, Feldman MD, Peck KN, DeMichele AM, Alwine JC, Robertson ES.

Front Microbiol. 2018 May 15;9:951. doi: 10.3389/fmicb.2018.00951. eCollection 2018.


Acid Suspends the Circadian Clock in Hypoxia through Inhibition of mTOR.

Walton ZE, Patel CH, Brooks RC, Yu Y, Ibrahim-Hashim A, Riddle M, Porcu A, Jiang T, Ecker BL, Tameire F, Koumenis C, Weeraratna AT, Welsh DK, Gillies R, Alwine JC, Zhang L, Powell JD, Dang CV.

Cell. 2018 Jun 28;174(1):72-87.e32. doi: 10.1016/j.cell.2018.05.009. Epub 2018 May 31.


Arginase 2 Suppresses Renal Carcinoma Progression via Biosynthetic Cofactor Pyridoxal Phosphate Depletion and Increased Polyamine Toxicity.

Ochocki JD, Khare S, Hess M, Ackerman D, Qiu B, Daisak JI, Worth AJ, Lin N, Lee P, Xie H, Li B, Wubbenhorst B, Maguire TG, Nathanson KL, Alwine JC, Blair IA, Nissim I, Keith B, Simon MC.

Cell Metab. 2018 Jun 5;27(6):1263-1280.e6. doi: 10.1016/j.cmet.2018.04.009. Epub 2018 May 10.


The ovarian cancer oncobiome.

Banerjee S, Tian T, Wei Z, Shih N, Feldman MD, Alwine JC, Coukos G, Robertson ES.

Oncotarget. 2017 May 30;8(22):36225-36245. doi: 10.18632/oncotarget.16717.


ACSS2-mediated acetyl-CoA synthesis from acetate is necessary for human cytomegalovirus infection.

Vysochan A, Sengupta A, Weljie AM, Alwine JC, Yu Y.

Proc Natl Acad Sci U S A. 2017 Feb 21;114(8):E1528-E1535. doi: 10.1073/pnas.1614268114. Epub 2017 Feb 6.


Identification of fungal pathogens in a patient with acute myelogenic leukemia using a pathogen detection array technology.

Banerjee S, Peck KN, Feldman MD, Schuster MG, Alwine JC, Robertson ES.

Cancer Biol Ther. 2016 Apr 2;17(4):339-45. doi: 10.1080/15384047.2015.1121349.


Distinct microbiological signatures associated with triple negative breast cancer.

Banerjee S, Wei Z, Tan F, Peck KN, Shih N, Feldman M, Rebbeck TR, Alwine JC, Robertson ES.

Sci Rep. 2015 Oct 15;5:15162. doi: 10.1038/srep15162.


Human Cytomegalovirus: Coordinating Cellular Stress, Signaling, and Metabolic Pathways.

Shenk T, Alwine JC.

Annu Rev Virol. 2014 Nov;1(1):355-74. doi: 10.1146/annurev-virology-031413-085425.


Metagenomic assay for identification of microbial pathogens in tumor tissues.

Baldwin DA, Feldman M, Alwine JC, Robertson ES.

MBio. 2014 Sep 16;5(5):e01714-14. doi: 10.1128/mBio.01714-14.


ChREBP, a glucose-responsive transcriptional factor, enhances glucose metabolism to support biosynthesis in human cytomegalovirus-infected cells.

Yu Y, Maguire TG, Alwine JC.

Proc Natl Acad Sci U S A. 2014 Feb 4;111(5):1951-6. doi: 10.1073/pnas.1310779111. Epub 2014 Jan 21.


PKR-like endoplasmic reticulum kinase is necessary for lipogenic activation during HCMV infection.

Yu Y, Pierciey FJ Jr, Maguire TG, Alwine JC.

PLoS Pathog. 2013;9(4):e1003266. doi: 10.1371/journal.ppat.1003266. Epub 2013 Apr 4.


The human cytomegalovirus assembly compartment: a masterpiece of viral manipulation of cellular processes that facilitates assembly and egress.

Alwine JC.

PLoS Pathog. 2012 Sep;8(9):e1002878. doi: 10.1371/journal.ppat.1002878. Epub 2012 Sep 20. No abstract available.


Dynein mediates the localization and activation of mTOR in normal and human cytomegalovirus-infected cells.

Clippinger AJ, Alwine JC.

Genes Dev. 2012 Sep 15;26(18):2015-26. doi: 10.1101/gad.196147.112.


Human cytomegalovirus infection induces adipocyte-like lipogenesis through activation of sterol regulatory element binding protein 1.

Yu Y, Maguire TG, Alwine JC.

J Virol. 2012 Mar;86(6):2942-9. doi: 10.1128/JVI.06467-11. Epub 2012 Jan 18.


Human cytomegalovirus induces multiple means to combat reactive oxygen species.

Tilton C, Clippinger AJ, Maguire T, Alwine JC.

J Virol. 2011 Dec;85(23):12585-93. doi: 10.1128/JVI.05572-11. Epub 2011 Sep 21.


Viruses and metabolism: alterations of glucose and glutamine metabolism mediated by human cytomegalovirus.

Yu Y, Clippinger AJ, Pierciey FJ Jr, Alwine JC.

Adv Virus Res. 2011;80:49-67. doi: 10.1016/B978-0-12-385987-7.00003-8.


Human cytomegalovirus infection maintains mTOR activity and its perinuclear localization during amino acid deprivation.

Clippinger AJ, Maguire TG, Alwine JC.

J Virol. 2011 Sep;85(18):9369-76. doi: 10.1128/JVI.05102-11. Epub 2011 Jul 6.


Viral effects on metabolism: changes in glucose and glutamine utilization during human cytomegalovirus infection.

Yu Y, Clippinger AJ, Alwine JC.

Trends Microbiol. 2011 Jul;19(7):360-7. doi: 10.1016/j.tim.2011.04.002. Epub 2011 May 12. Review.


The changing role of mTOR kinase in the maintenance of protein synthesis during human cytomegalovirus infection.

Clippinger AJ, Maguire TG, Alwine JC.

J Virol. 2011 Apr;85(8):3930-9. doi: 10.1128/JVI.01913-10. Epub 2011 Feb 9.


Human cytomegalovirus activates glucose transporter 4 expression to increase glucose uptake during infection.

Yu Y, Maguire TG, Alwine JC.

J Virol. 2011 Feb;85(4):1573-80. doi: 10.1128/JVI.01967-10. Epub 2010 Dec 8.


Human cytomegalovirus induces the endoplasmic reticulum chaperone BiP through increased transcription and activation of translation by using the BiP internal ribosome entry site.

Buchkovich NJ, Yu Y, Pierciey FJ Jr, Alwine JC.

J Virol. 2010 Nov;84(21):11479-86. doi: 10.1128/JVI.01330-10. Epub 2010 Aug 25.


Role of the endoplasmic reticulum chaperone BiP, SUN domain proteins, and dynein in altering nuclear morphology during human cytomegalovirus infection.

Buchkovich NJ, Maguire TG, Alwine JC.

J Virol. 2010 Jul;84(14):7005-17. doi: 10.1128/JVI.00719-10. Epub 2010 May 19.


Glutamine metabolism is essential for human cytomegalovirus infection.

Chambers JW, Maguire TG, Alwine JC.

J Virol. 2010 Feb;84(4):1867-73. doi: 10.1128/JVI.02123-09. Epub 2009 Nov 25.


The endoplasmic reticulum chaperone BiP/GRP78 is important in the structure and function of the human cytomegalovirus assembly compartment.

Buchkovich NJ, Maguire TG, Paton AW, Paton JC, Alwine JC.

J Virol. 2009 Nov;83(22):11421-8. doi: 10.1128/JVI.00762-09. Epub 2009 Sep 9.


Modulation of host cell stress responses by human cytomegalovirus.

Alwine JC.

Curr Top Microbiol Immunol. 2008;325:263-79. Review.


The TORrid affairs of viruses: effects of mammalian DNA viruses on the PI3K-Akt-mTOR signalling pathway.

Buchkovich NJ, Yu Y, Zampieri CA, Alwine JC.

Nat Rev Microbiol. 2008 Apr;6(4):266-75. doi: 10.1038/nrmicro1855. Epub 2008 Mar 3. Review.


Human cytomegalovirus specifically controls the levels of the endoplasmic reticulum chaperone BiP/GRP78, which is required for virion assembly.

Buchkovich NJ, Maguire TG, Yu Y, Paton AW, Paton JC, Alwine JC.

J Virol. 2008 Jan;82(1):31-9. Epub 2007 Oct 17.


AMPK-mediated inhibition of mTOR kinase is circumvented during immediate-early times of human cytomegalovirus infection.

Kudchodkar SB, Del Prete GQ, Maguire TG, Alwine JC.

J Virol. 2007 Apr;81(7):3649-51. Epub 2007 Jan 10.


Human cytomegalovirus infection alters the substrate specificities and rapamycin sensitivities of raptor- and rictor-containing complexes.

Kudchodkar SB, Yu Y, Maguire TG, Alwine JC.

Proc Natl Acad Sci U S A. 2006 Sep 19;103(38):14182-7. Epub 2006 Sep 7.


Human cytomegalovirus infection activates and regulates the unfolded protein response.

Isler JA, Skalet AH, Alwine JC.

J Virol. 2005 Jun;79(11):6890-9.


Analysis of splice variants of the immediate-early 1 region of human cytomegalovirus.

Awasthi S, Isler JA, Alwine JC.

J Virol. 2004 Aug;78(15):8191-200.


Association of polyadenylation cleavage factor I with U1 snRNP.

Awasthi S, Alwine JC.

RNA. 2003 Nov;9(11):1400-9.


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