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Items: 2

1.

GRIM-Filter: Fast seed location filtering in DNA read mapping using processing-in-memory technologies.

Kim JS, Senol Cali D, Xin H, Lee D, Ghose S, Alser M, Hassan H, Ergin O, Alkan C, Mutlu O.

BMC Genomics. 2018 May 9;19(Suppl 2):89. doi: 10.1186/s12864-018-4460-0.

2.

GateKeeper: a new hardware architecture for accelerating pre-alignment in DNA short read mapping.

Alser M, Hassan H, Xin H, Ergin O, Mutlu O, Alkan C.

Bioinformatics. 2017 Nov 1;33(21):3355-3363. doi: 10.1093/bioinformatics/btx342.

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