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Items: 1 to 50 of 165

1.

Biodegradation of Organophosphorus Compounds Predicted by Enzymatic Process Using Molecular Modelling and Observed in Soil Samples Through Analytical Techniques and Microbiological Analysis: A Comparison.

Cardozo M, de Almeida JSFD, Cavalcante SFA, Salgado JRS, Gonçalves AS, França TCC, Kuca K, Bizzo HR.

Molecules. 2019 Dec 23;25(1). pii: E58. doi: 10.3390/molecules25010058.

2.

NKT-Like (CD3+CD56+) Cells in Chronic Myeloid Leukemia Patients Treated With Tyrosine Kinase Inhibitors.

Almeida JS, Couceiro P, López-Sejas N, Alves V, Růžičková L, Tarazona R, Solana R, Freitas-Tavares P, Santos-Rosa M, Rodrigues-Santos P.

Front Immunol. 2019 Oct 22;10:2493. doi: 10.3389/fimmu.2019.02493. eCollection 2019.

3.

Mayaro Virus Replication Restriction and Induction of Muscular Inflammation in Mice Are Dependent on Age, Type-I Interferon Response, and Adaptive Immunity.

Figueiredo CM, Neris RLDS, Gavino-Leopoldino D, da Silva MOL, Almeida JS, Dos-Santos JS, Figueiredo CP, Bellio M, Bozza MT, Assunção-Miranda I.

Front Microbiol. 2019 Oct 1;10:2246. doi: 10.3389/fmicb.2019.02246. eCollection 2019.

4.

In Vitro Evaluation of Neutral Aryloximes as Reactivators for Electrophorus eel Acetylcholinesterase Inhibited by Paraoxon.

Kitagawa DAS, Cavalcante SFA, de Paula RL, Rodrigues RB, Bernardo LB, da Silva MCJ, da Silva TN, Dos Santos WV, Granjeiro JM, de Almeida JSFD, Barcellos MC, de A Correa AB, França TCC, Kuča K, Simas ABC.

Biomolecules. 2019 Oct 8;9(10). pii: E583. doi: 10.3390/biom9100583.

5.

Synthesis of New Quinoline-Piperonal Hybrids as Potential Drugs against Alzheimer's Disease.

de Oliveira C Brum J, Neto DCF, de Almeida JSFD, Lima JA, Kuca K, França TCC, Figueroa-Villar JD.

Int J Mol Sci. 2019 Aug 14;20(16). pii: E3944. doi: 10.3390/ijms20163944.

6.

Benchmarking of alignment-free sequence comparison methods.

Zielezinski A, Girgis HZ, Bernard G, Leimeister CA, Tang K, Dencker T, Lau AK, Röhling S, Choi JJ, Waterman MS, Comin M, Kim SH, Vinga S, Almeida JS, Chan CX, James BT, Sun F, Morgenstern B, Karlowski WM.

Genome Biol. 2019 Jul 25;20(1):144. doi: 10.1186/s13059-019-1755-7.

7.

Early vocal contact and music in the NICU: new insights into preventive interventions.

Filippa M, Lordier L, De Almeida JS, Monaci MG, Adam-Darque A, Grandjean D, Kuhn P, Hüppi PS.

Pediatr Res. 2020 Jan;87(2):249-264. doi: 10.1038/s41390-019-0490-9. Epub 2019 Jul 2. Review.

PMID:
31266053
8.

Synthesis and in vitro evaluation of neutral aryloximes as reactivators of Electrophorus eel acetylcholinesterase inhibited by NEMP, a VX surrogate.

Cavalcante SFA, Kitagawa DAS, Rodrigues RB, Bernardo LB, da Silva TN, Dos Santos WV, Correa ABA, de Almeida JSFD, França TCC, Kuča K, Simas ABC.

Chem Biol Interact. 2019 Aug 25;309:108682. doi: 10.1016/j.cbi.2019.05.048. Epub 2019 Jun 1.

PMID:
31163137
9.

Cardiac Angiosarcoma: From Cardiac Tamponade to Ischaemic Stroke - A Diagnostic Challenge.

Chaves VM, Pereira C, Andrade M, von Hafe P, Almeida JS.

Eur J Case Rep Intern Med. 2019 Apr 3;6(4):001079. doi: 10.12890/2019_001079. eCollection 2019.

10.

Surface screening, molecular modeling and in vitro studies on the interactions of aflatoxin M1 and human enzymes acetyl- and butyrylcholinesterase.

de Almeida JSFD, Cavalcante SFA, Dolezal R, Kuca K, Musilek K, Jun D, França TCC.

Chem Biol Interact. 2019 Aug 1;308:113-119. doi: 10.1016/j.cbi.2019.05.022. Epub 2019 May 14.

PMID:
31100275
11.

Neuroprocessing Mechanisms of Music during Fetal and Neonatal Development: A Role in Neuroplasticity and Neurodevelopment.

Chorna O, Filippa M, De Almeida JS, Lordier L, Monaci MG, Hüppi P, Grandjean D, Guzzetta A.

Neural Plast. 2019 Mar 20;2019:3972918. doi: 10.1155/2019/3972918. eCollection 2019. Review.

12.

NEOTROPICAL XENARTHRANS: a data set of occurrence of xenarthran species in the Neotropics.

Santos PM, Bocchiglieri A, Chiarello AG, Paglia AP, Moreira A, de Souza AC, Abba AM, Paviolo A, Gatica A, Medeiro AZ, Costa AN, Gallina AG, Yanosky AA, Jesus A, Bertassoni A, Rocha A, Bovo AAA, Bager A, Mol AC, Martensen AC, Faustino AC, Lopes AMC, Percequillo AR, Vogliotti A, Keuroghlian A, de la Colina MA, Devlin AL, García-Olaechea A, Sánchez A, Srbek-Araujo AC, Ochoa AC, Oliveira ACM, Lacerda ACR, Campelo AKN, de Oliveira Paschoal AM, Costa ARC, Meiga AYY, Jesus AS, Feijó A, Hirsch A, da Silva ALF, Botelho ALM, Regolin AL, Lanna AM, Nunes AV, Kindel A, Moraes AM, Gatti A, Noss AJ, Nobre AB, Montanarin A, Deffaci ÂC, de Albuquerque ACF, de Oliveira AK, Mangione AM, Pontes ARM, Bertoldi AT, Calouro AM, Desbiez ALJ, Fernandes A, Ferreguetti AC, da Silva MAA, Zimbres B, Luciano BFL, de Thoisy B, Niebuhr BBS, Papi B, Gómez-Valencia B, Santos BA, Lima BC, Oliveira BG, Santos BS, Campos BATP, Leles B, de Albuquerque França BR, Lim B, Oliveira CT, Cantagallo C, Lara CC, Lima CS, Gestich CC, de Melo-Soares CD, Peres CA, Kasper CB, Candia-Gallardo C, De Angelo C, Fragoso CE, de Freitas CH, Salvador CH, Brocardo CR, Melo CD, Leuchtenberger C, Braga C, Sánchez-Lalinde C, Bueno C, Luna CL, Rojano C, Hurtado CM, Dos Santos CC, Tellaeche C, Rosa C, de Campos CB, Silva CR, Kanda CZ, Jenkins CN, McDonough C, Trinca CT, da Cunha CJ, Widmer CE, Santos C, Buscariol D, Carreira DC, Carvalho DR, da Silva Ferraz D, Casali D, Thornton D, Vasconcellos DR, Barcelos D, Brown D, Ramos DL, Moreira DO, Yogui DR, Faria D, Sana DA, de Mattia DL, Henz DJ, Friedeberg DB, Carvalho DLKP, Astúa D, Queirolo D, Varela DM, Eaton DP, Dias DM, Rivadeneira EF, Rocha EC, de Abreu-Júnior EF, Carrano E, Santos EM Jr, Setz EZF, Carvalho EAR Jr, de Almeida Chiquito E, de Matos Cardoso E, Mendonça EN, D'Bastiani E, Vieira EM, Ramalho EE, Guijosa-Guadarrama E, González E, Maggiorini EV, Fischer E, Aguiar EF, Castro ÉP, de la Peña-Cuéllar E, de Castro EBV, Brítez EB, Vanderhoeven EA, Pedó E, Rocha FL, Girardi F, de Oliveira Roque F, Mazim FD, de Barros FM, Martello F, Fantacini FM, Pedrosa F, Peters FB, Abra FD, de Azevedo FC, da Silva Santos F, da Silva FG, Teixeira FZ, Perini FA, Passos FC, Carvalho F, de Azevedo FCC, de Pinho FF, Gonçalves F, Lima F, Contreras-Moreno FM, Pedroni F, Tortato FR, Santos FPR, Caruso F, Tirelli FP, Miranda FR, Rodrigues FHG, Ubaid FK, Palmeira FBL, da Silva FA, Grotta-Neto F, de Souza FL, Costa FE, Pérez-Garduza F, Delsuc F, Lemos F, Pinto FR, Boaglio GI, Massocato GF, Preuss G, Hofmann GS, Aguiar GL, Oliveira GS, Duarte GT, Beca G, Giné GAF, Batista GO, Gil GE, Gonsioroski G, Secco H, Medeiros HR, Coelho IP, Franceschi IC, Bernardi I, de la Torre JA, Zocche JJ, Seibert JB, de Faria Falcão JC, Dias JHM, Nodari JZ, Oliveira JA, Giovanelli JGR, Favoretti JPP, Polisar J, Sponchiado J, Cherem JJ, Ramírez JFM, de Toledo JJ, Duarte JMB, de Matos JR, Arrabal JP, de Faria Oshima JE, Ribeiro JF, Bogoni JA, Pacheco JJC, Schuchmann KL, Ferraz KMPMB, Dos Santos Everton L, Bailey LL, Gonçalves LO, Cullen L Jr, de Andrade LR, Trevelin LC, Bonjorne L, de Almeida Rodrigues L, Leuzinger L, Perillo LN, Araújo LS, Hufnagel L, Ribeiro LO, Bernardo LRR, Oliveira-Santos LGR, Varzinczak LH, Borges LHM, Guimarães LN, Möcklinghoff L, Oliveira MA, Magioli M, de Assis Jardim MM, de Oliveira ML, Tortato MA, Dums M, Iezzi ME, Pereira MJR, Jorge ML, de Castro Morini MS, Landis MB, Xavier MS, Barros MAS, da Silva ML, Rivero M, Zanin M, Marques MI, Alves MH, Di Bitetti MS, Alvarez MR, Graipel ME, Godoi MN, Benedetti MA, Beltrão MG, Monteiro MCM, de Paula MJ, Perilli MLL, da Silva MP, Villar N, De Albuquerque NM, Canassa NF, Filho NM, da Rosa Oliveira N, Pasqualotto N, Cáceres NC, Attias N, Favarini MO, Ribeiro OS, Gonçalves PR, da Rocha PA, Condé PA, Akkawi P, Cruz P, Lira PK, Ferreira PM, Arroyo-Gerala P, Hartmann PA, de Tarso Zuquim Antas P, Marinho PH, de Faria Peres PH, Peña-Mondragón JL, Lombardi PM, de Souza Laurindo R, Alves RSC, Grangeiro RDP, Silva RL, Beltrão-Mendes R, Bonikowski RTR, Reppucci J, Arrais RC, Sampaio R, Sartorello R, Bovendorp RS, McNab R, Hack ROE, Magalhães RA, Araújo RC, de Almeida Nobre R, Pérez RRL, Massara RL, de Paula RC, Anleu RG, Marques RV, Dornas R, Rolim SG, Cavalcanti SMC, Lima SR, Ballari SA, Santamaría SB, Silva SM, Age SG, Godim T, Sobral-Souza T, Maccarini TB, Rodrigues TF, Piovezan U, Tavares VDC, Quiroga VA, Krepschi VG, Filho VP, Bastazini VAG, de Oliveira Gasparotto VP, Orsini VS, Layme VMG, Hannibal W, Dáttilo W, de Carvalho WD, Loughry WJ, Di Blanco YE, Núñez-Regueiro MM, Giubbina MF, Passamani M, de Alagão Querido LC, da Costa Toledo GA, Ribeiro IK, Quintilham L, de Bustos S, de la Maza J, Neto JFL, de Andrade Silva KVK, Sartorello L, Rampim LE, Marás GA, Camino M, Freitas-Junior M, Perovic PG, Paolino RM, Ferreira SD, Towns V, Esperandio IB, Aximoff I, Beduschi J, Guenther M, de Cassia Bianchi R, Keuroghlian-Eaton S, Mendes SL, de Fatima Cunha L, Cirignoli S, Ciocheti G, do Prado HA, Fernandes-Ferreira H, de Sena LMM, Yamane MH, Brennand PGG, da Silva RD, Escobar S, Endo W, Hurtado RR, Gontijo NRC, Marsh LK, Severo MM, Pardo JM, Costa SA, Melo GL, Santana GG, de Miranda Mourão G, Gaspari GG, Duarte H, Cabral H, da Silva LH, Mendonça L, Barbosa LL, Dos Santos MV, Moraes MFD, Gordo M, Versiani NF, Cantero N, Pays O, Guedes PG, Colas-Rosas PF, Ribeiro P, Renaud PC, Hoogesteijn RJ, Ayala R, da Cunha RGT, Schaub R, Laurito S, Betkowski SE, Cortez S, Silva SSP, de Oliveira TG, Spironello WR, Gengler N, Hidalgo MM, Juárez R, Iglesias JA, Anacleto TC, de Souza Fialho M, Cavicchioli G, Beccato MAB, Silva MD, Neto OC, Lopes KGD, Godoy LP, Luiz MR, Rojas Bonzi VB, Ferreira GB, Oliveira MJR, Hinojosa J, de Oliveira LFB, Nagy-Reis MB, Ramirez SF, Concone HVB, Mourthe I, Martínez-Lanfranco JA, Zanoni JB, Moreira TC, Guarderas ZV, Bazilio S, Cervini M, Pinheiro MS, Morato RG, Peroni N, Trigo TC, Machado RB, Gaspari F, Koenemann JG, Rudolf JC, Benchimol M, Vieira MV, Retta LM, Santiago PGF, Ciccia PG, Estrela PC, Carvalho S, Esbérard CEL, de la Cruz YB, Castro-Prieto J, Braga RM, Cartes JL, Andrade-Núñez MJ, Denkiewicz NM, Falconi N, Pezzuti JCB, Del Castillo Cordero HF, de Sousa LC, de Gaspari Júnior RL, Santos-Filho M, Almeida JS, Thompson JJ, Dos Santos JS, Pereira-Ribeiro J, Burs K, da Silva KFM, Velilla M, da Silva MX, de la Sancha NU, Pinheiro PF, de Castilho PV, Bercê W, Assis JC, Tonetti VR, Alves-Eigenheer M, Chinem S, Honda LK, de Godoy Bergallo H, Alberici V, Wallace R, Krauer JMC, Ribeiro MC, Galetti M.

Ecology. 2019 Jul;100(7):e02663. doi: 10.1002/ecy.2663. Epub 2019 Apr 23.

PMID:
31013542
13.

An Unusual Case of Tricuspid Stenosis.

Ferreira S, Barbosa A, Gomes F, Almeida J, Almeida JS, Amorim MJ, Araújo JP.

Eur J Case Rep Intern Med. 2018 Apr 24;5(4):000836. doi: 10.12890/2018_000836. eCollection 2018.

14.

Serverless OpenHealth at data commons scale-traversing the 20 million patient records of New York's SPARCS dataset in real-time.

Almeida JS, Hajagos J, Saltz J, Saltz M.

PeerJ. 2019 Jan 15;7:e6230. doi: 10.7717/peerj.6230. eCollection 2019.

15.

Enabling precision medicine via standard communication of HTS provenance, analysis, and results.

Alterovitz G, Dean D, Goble C, Crusoe MR, Soiland-Reyes S, Bell A, Hayes A, Suresh A, Purkayastha A, King CH, Taylor D, Johanson E, Thompson EE, Donaldson E, Morizono H, Tsang H, Vora JK, Goecks J, Yao J, Almeida JS, Keeney J, Addepalli K, Krampis K, Smith KM, Guo L, Walderhaug M, Schito M, Ezewudo M, Guimera N, Walsh P, Kahsay R, Gottipati S, Rodwell TC, Bloom T, Lai Y, Simonyan V, Mazumder R.

PLoS Biol. 2018 Dec 31;16(12):e3000099. doi: 10.1371/journal.pbio.3000099. eCollection 2018 Dec.

16.

Effect of Age on NK Cell Compartment in Chronic Myeloid Leukemia Patients Treated With Tyrosine Kinase Inhibitors.

Rodrigues-Santos P, López-Sejas N, Almeida JS, Ruzičková L, Couceiro P, Alves V, Campos C, Alonso C, Tarazona R, Freitas-Tavares P, Solana R, Santos-Rosa M.

Front Immunol. 2018 Nov 8;9:2587. doi: 10.3389/fimmu.2018.02587. eCollection 2018.

17.

Molecular Modeling and In Vitro Studies of a Neutral Oxime as a Potential Reactivator for Acetylcholinesterase Inhibited by Paraoxon.

de Paula RL, de Almeida JSFD, Cavalcante SFA, Gonçalves AS, Simas ABC, Franca TCC, Valis M, Kuca K, Nepovimova E, Granjeiro JM.

Molecules. 2018 Nov 12;23(11). pii: E2954. doi: 10.3390/molecules23112954.

18.

Aquatic macrophytes and trophic interactions: a scientometric analyses and research perspectives.

Rocha CMC, Lima D, Cunha MCC, Almeida JS.

Braz J Biol. 2019 Oct-Dec;79(4):617-624. doi: 10.1590/1519-6984.185505. Epub 2018 Oct 29.

19.
20.

Molecular Modeling Studies on the Interactions of Aflatoxin B1 and Its Metabolites with Human Acetylcholinesterase. Part II: Interactions with the Catalytic Anionic Site (CAS).

de Almeida JSFD, Dolezal R, Krejcar O, Kuca K, Musilek K, Jun D, França TCC.

Toxins (Basel). 2018 Sep 25;10(10). pii: E389. doi: 10.3390/toxins10100389.

21.

Kinomics toolbox-A web platform for analysis and viewing of kinomic peptide array data.

Dussaq AM, Kennell T Jr, Eustace NJ, Anderson JC, Almeida JS, Willey CD.

PLoS One. 2018 Aug 21;13(8):e0202139. doi: 10.1371/journal.pone.0202139. eCollection 2018.

22.

A New Approach to Diagnose Parkinson's Disease Using a Structural Cooccurrence Matrix for a Similarity Analysis.

de Souza JWM, Alves SSA, Rebouças ES, Almeida JS, Rebouças Filho PP.

Comput Intell Neurosci. 2018 Apr 24;2018:7613282. doi: 10.1155/2018/7613282. eCollection 2018.

23.

Treatment of dental biofilm with a tincture of Bauhinia forficata leaves: an ex-vivo study.

Ferreira-Filho JCC, Marre ATO, Almeida JSS, Lobo LA, Farah A, Valença AMG, Fonseca-Gonçalves A.

Nat Prod Res. 2019 Dec;33(23):3432-3435. doi: 10.1080/14786419.2018.1477146. Epub 2018 May 21.

PMID:
29781298
24.

Molecular modeling studies on the interactions of aflatoxin B1 and its metabolites with the peripheral anionic site of human acetylcholinesterase.

de Almeida JSFD, Cavalcante SFA, Dolezal R, Kuca K, Musilek K, Jun D, França TCC.

J Biomol Struct Dyn. 2019 May;37(8):2041-2048. doi: 10.1080/07391102.2018.1475259. Epub 2018 Nov 2.

PMID:
29749305
25.

Rational Design of a New Class of Toll-Like Receptor 4 (TLR4) Tryptamine Related Agonists by Means of the Structure- and Ligand-Based Virtual Screening for Vaccine Adjuvant Discovery.

Honegr J, Dolezal R, Malinak D, Benkova M, Soukup O, Almeida JSFD, Franca TCC, Kuca K, Prymula R.

Molecules. 2018 Jan 4;23(1). pii: E102. doi: 10.3390/molecules23010102.

26.

A Containerized Software System for Generation, Management, and Exploration of Features from Whole Slide Tissue Images.

Saltz J, Sharma A, Iyer G, Bremer E, Wang F, Jasniewski A, DiPrima T, Almeida JS, Gao Y, Zhao T, Saltz M, Kurc T.

Cancer Res. 2017 Nov 1;77(21):e79-e82. doi: 10.1158/0008-5472.CAN-17-0316.

27.

Inactivation of MarR gene homologs increases susceptibility to antimicrobials in Bacteroides fragilis.

Silva CMG, Silva DNDS, Costa SBD, Almeida JSS, Boente RF, Teixeira FL, Domingues RMCP, Lobo LA.

Braz J Microbiol. 2018 Jan - Mar;49(1):200-206. doi: 10.1016/j.bjm.2017.05.005. Epub 2017 Aug 9.

28.

Dipeptidyl peptidase-4 levels are increased and partially related to body fat distribution in patients with familial partial lipodystrophy type 2.

Valerio CM, de Almeida JS, Moreira RO, Aguiar LBS, Siciliano PO, Carvalho DP, Godoy-Matos AF.

Diabetol Metab Syndr. 2017 Apr 24;9:26. doi: 10.1186/s13098-017-0226-0. eCollection 2017.

29.

Safe "cloudification" of large images through picker APIs.

Bremer E, Kurc T, Gao Y, Saltz J, Almeida JS.

AMIA Annu Symp Proc. 2017 Feb 10;2016:342-351. eCollection 2016.

30.

Differential Gene Expression in Ductal Carcinoma In Situ of the Breast Based on ERBB2 Status.

Agosto-Arroyo E, Isayeva T, Wei S, Almeida JS, Harada S.

Cancer Control. 2017 Jan;24(1):102-110.

PMID:
28178722
31.

Isomorphic semantic mapping of variant call format (VCF2RDF).

Penha ED, Iriabho E, Dussaq A, de Oliveira DM, Almeida JS.

Bioinformatics. 2017 Feb 15;33(4):547-548. doi: 10.1093/bioinformatics/btw652.

32.

Mechanistic Parameterization of the Kinomic Signal in Peptide Arrays.

Dussaq A, Anderson JC, Willey CD, Almeida JS.

J Proteomics Bioinform. 2016 May;9(5):151-157. Epub 2016 May 24.

33.

Comparison of Two Types of Insoles on Musculoskeletal Symptoms and Plantar Pressure Distribution in a Work Environment: A Randomized Clinical Trial.

Almeida JS, Vanderlei FM, Pastre EC, Martins RA, Padovani CR, Filho GC.

Clin Med Res. 2016 Jun;14(2):67-74. doi: 10.3121/cmr.2016.1301. Epub 2016 May 26.

34.

Docking and molecular dynamics studies of peripheral site ligand-oximes as reactivators of sarin-inhibited human acetylcholinesterase.

de Almeida JS, Cuya Guizado TR, Guimarães AP, Ramalho TC, Gonçalves AS, de Koning MC, França TC.

J Biomol Struct Dyn. 2016 Dec;34(12):2632-2642. Epub 2016 May 9.

PMID:
26612005
35.

Computational Pathology: A Path Ahead.

Louis DN, Feldman M, Carter AB, Dighe AS, Pfeifer JD, Bry L, Almeida JS, Saltz J, Braun J, Tomaszewski JE, Gilbertson JR, Sinard JH, Gerber GK, Galli SJ, Golden JA, Becich MJ.

Arch Pathol Lab Med. 2016 Jan;140(1):41-50. doi: 10.5858/arpa.2015-0093-SA. Epub 2015 Jun 22.

36.

Proteomic Analysis of Plasma from California Sea Lions (Zalophus californianus) Reveals Apolipoprotein E as a Candidate Biomarker of Chronic Domoic Acid Toxicosis.

Neely BA, Ferrante JA, Chaves JM, Soper JL, Almeida JS, Arthur JM, Gulland FM, Janech MG.

PLoS One. 2015 Apr 28;10(4):e0123295. doi: 10.1371/journal.pone.0123295. eCollection 2014.

37.

Coming into focus: computational pathology as the new big data microscope.

Roth KA, Almeida JS.

Am J Pathol. 2015 Mar;185(3):600-1. doi: 10.1016/j.ajpath.2015.01.002.

38.

Development of novel software to generate anthropometric norms at perinatal autopsy.

Cain MD, Siebert JR, Iriabho E, Gruneberg A, Almeida JS, Faye-Petersen OM.

Pediatr Dev Pathol. 2015 May-Jun;18(3):203-9. doi: 10.2350/14-11-1578-OA.1. Epub 2015 Jan 29.

PMID:
25634794
39.

A unique sex chromosome system in the knifefish Gymnotus bahianus with inferences about chromosomal evolution of Gymnotidae.

Almeida JS, Migues VH, Diniz D, Affonso PR.

J Hered. 2015 Mar-Apr;106(2):177-83. doi: 10.1093/jhered/esu087. Epub 2015 Jan 16.

PMID:
25596613
40.

OpenHealth Platform for Interactive Contextualization of Population Health Open Data.

Almeida JS, Hajagos J, Crnosija I, Kurc T, Saltz M, Saltz J.

AMIA Annu Symp Proc. 2015 Nov 5;2015:297-305. eCollection 2015.

41.

Sequential steps of chromosomal differentiation in Atlantic surgeonfishes: evolutionary inferences.

Affonso PR, Fernandes MA, Almeida JS, Molina WF.

ScientificWorldJournal. 2014;2014:825703. doi: 10.1155/2014/825703. Epub 2014 Aug 12.

42.

QMachine: commodity supercomputing in web browsers.

Wilkinson SR, Almeida JS.

BMC Bioinformatics. 2014 Jun 9;15:176. doi: 10.1186/1471-2105-15-176.

43.

A novel green approach for the preparation of cellulose nanowhiskers from white coir.

Nascimento DM, Almeida JS, Dias AF, Figueirêdo MC, Morais JP, Feitosa JP, de F Rosa M.

Carbohydr Polym. 2014 Sep 22;110:456-63. doi: 10.1016/j.carbpol.2014.04.053. Epub 2014 Apr 24.

PMID:
24906779
44.

Mining genome sequencing data to identify the genomic features linked to breast cancer histopathology.

Ping Z, Siegal GP, Almeida JS, Schnitt SJ, Shen D.

J Pathol Inform. 2014 Jan 31;5(1):3. doi: 10.4103/2153-3539.126147. eCollection 2014.

45.

Non-synonymous variations in cancer and their effects on the human proteome: workflow for NGS data biocuration and proteome-wide analysis of TCGA data.

Cole C, Krampis K, Karagiannis K, Almeida JS, Faison WJ, Motwani M, Wan Q, Golikov A, Pan Y, Simonyan V, Mazumder R.

BMC Bioinformatics. 2014 Jan 27;15:28. doi: 10.1186/1471-2105-15-28.

46.

TopFed: TCGA tailored federated query processing and linking to LOD.

Saleem M, Padmanabhuni SS, Ngomo AC, Iqbal A, Almeida JS, Decker S, Deus HF.

J Biomed Semantics. 2014 Dec 3;5:47. doi: 10.1186/2041-1480-5-47. eCollection 2014.

47.

The use of 185 MBq and 740 MBq of 153-samarium hydroxyapatite for knee synovectomy in haemophilia.

Calegaro JU, Machado J, Furtado RG, de Almeida JS, de Vasconcelos AV, de Barboza MF, de Paula AP.

Haemophilia. 2014 May;20(3):421-5. doi: 10.1111/hae.12319. Epub 2013 Dec 16.

48.

Sequence analysis by iterated maps, a review.

Almeida JS.

Brief Bioinform. 2014 May;15(3):369-75. doi: 10.1093/bib/bbt072. Epub 2013 Oct 25. Review.

49.

Chromosomal variation in the tropical armoured catfish Callichthys callichthys (Siluriformes, Callichthyidae): implications for conservation and taxonomy in a species complex from a Brazilian hotspot.

Almeida JS, Affonso PR, Diniz D, Carneiro PL, Dias AL.

Zebrafish. 2013 Dec;10(4):451-8. doi: 10.1089/zeb.2013.0885. Epub 2013 Oct 1.

PMID:
24083504
50.

Machine learning to predict extubation outcome in premature infants.

Mueller M, Wagner CC, Stanislaus R, Almeida JS.

Proc Int Jt Conf Neural Netw. 2013 Aug;2013:1-6.

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