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Items: 27

1.

Plant-mediated effects of soil phosphorus on the root-associated fungal microbiota in Arabidopsis thaliana.

Fabiańska I, Gerlach N, Almario J, Bucher M.

New Phytol. 2018 Oct 14. doi: 10.1111/nph.15538. [Epub ahead of print]

PMID:
30317641
2.

Arabidopsis thaliana and Pseudomonas Pathogens Exhibit Stable Associations over Evolutionary Timescales.

Karasov TL, Almario J, Friedemann C, Ding W, Giolai M, Heavens D, Kersten S, Lundberg DS, Neumann M, Regalado J, Neher RA, Kemen E, Weigel D.

Cell Host Microbe. 2018 Jul 11;24(1):168-179.e4. doi: 10.1016/j.chom.2018.06.011.

3.

Risk of Neoplastic Progression in Individuals at High Risk for Pancreatic Cancer Undergoing Long-term Surveillance.

Canto MI, Almario JA, Schulick RD, Yeo CJ, Klein A, Blackford A, Shin EJ, Sanyal A, Yenokyan G, Lennon AM, Kamel IR, Fishman EK, Wolfgang C, Weiss M, Hruban RH, Goggins M.

Gastroenterology. 2018 Sep;155(3):740-751.e2. doi: 10.1053/j.gastro.2018.05.035. Epub 2018 May 24.

PMID:
29803839
4.

Multifocal nitrous oxide cryoballoon ablation with or without EMR for treatment of neoplastic Barrett's esophagus (with video).

Canto MI, Shaheen NJ, Almario JA, Voltaggio L, Montgomery E, Lightdale CJ.

Gastrointest Endosc. 2018 Sep;88(3):438-446.e2. doi: 10.1016/j.gie.2018.03.024. Epub 2018 Apr 5.

5.

Pancreatic Juice Mutation Concentrations Can Help Predict the Grade of Dysplasia in Patients Undergoing Pancreatic Surveillance.

Suenaga M, Yu J, Shindo K, Tamura K, Almario JA, Zaykoski C, Witmer PD, Fesharakizadeh S, Borges M, Lennon AM, Shin EJ, Canto MI, Goggins M.

Clin Cancer Res. 2018 Jun 15;24(12):2963-2974. doi: 10.1158/1078-0432.CCR-17-2463. Epub 2018 Jan 4.

PMID:
29301828
6.

Root-associated fungal microbiota of nonmycorrhizal Arabis alpina and its contribution to plant phosphorus nutrition.

Almario J, Jeena G, Wunder J, Langen G, Zuccaro A, Coupland G, Bucher M.

Proc Natl Acad Sci U S A. 2017 Oct 31;114(44):E9403-E9412. doi: 10.1073/pnas.1710455114. Epub 2017 Oct 2.

7.

Lack of association between the pancreatitis risk allele CEL-HYB and pancreatic cancer.

Shindo K, Yu J, Suenaga M, Fesharakizadeh S, Tamura K, Almario JAN, Brant A, Borges M, Siddiqui A, Datta L, Wolfgang CL, Hruban RH, Klein AP, Goggins M.

Oncotarget. 2017 Feb 7;8(31):50824-50831. doi: 10.18632/oncotarget.15137. eCollection 2017 Aug 1.

8.

Inhibition of Fungal Pathogens across Genotypes and Temperatures by Amphibian Skin Bacteria.

Muletz-Wolz CR, Almario JG, Barnett SE, DiRenzo GV, Martel A, Pasmans F, Zamudio KR, Toledo LF, Lips KR.

Front Microbiol. 2017 Aug 21;8:1551. doi: 10.3389/fmicb.2017.01551. eCollection 2017.

9.

Distribution of 2,4-Diacetylphloroglucinol Biosynthetic Genes among the Pseudomonas spp. Reveals Unexpected Polyphyletism.

Almario J, Bruto M, Vacheron J, Prigent-Combaret C, Moënne-Loccoz Y, Muller D.

Front Microbiol. 2017 Jun 30;8:1218. doi: 10.3389/fmicb.2017.01218. eCollection 2017.

10.

Using an endoscopic distal cap to collect pancreatic fluid from the ampulla (with video).

Suenaga M, Sadakari Y, Almario JA, Borges M, Lennon AM, Shin EJ, Canto MI, Goggins M.

Gastrointest Endosc. 2017 Dec;86(6):1152-1156.e2. doi: 10.1016/j.gie.2017.02.026. Epub 2017 Mar 1.

PMID:
28259593
11.

Digital next-generation sequencing identifies low-abundance mutations in pancreatic juice samples collected from the duodenum of patients with pancreatic cancer and intraductal papillary mucinous neoplasms.

Yu J, Sadakari Y, Shindo K, Suenaga M, Brant A, Almario JAN, Borges M, Barkley T, Fesharakizadeh S, Ford M, Hruban RH, Shin EJ, Lennon AM, Canto MI, Goggins M.

Gut. 2017 Sep;66(9):1677-1687. doi: 10.1136/gutjnl-2015-311166. Epub 2016 Jul 18.

12.

Overexpression of ankyrin1 promotes pancreatic cancer cell growth.

Omura N, Mizuma M, MacGregor A, Hong SM, Ayars M, Almario JA, Borges M, Kanda M, Li A, Vincent A, Maitra A, Goggins M.

Oncotarget. 2016 Jun 7;7(23):34977-87. doi: 10.18632/oncotarget.9009.

13.

Citrus-derived oil inhibits Staphylococcus aureus growth and alters its interactions with bovine mammary cells.

Federman C, Joo J, Almario JA, Salaheen S, Biswas D.

J Dairy Sci. 2016 May;99(5):3667-3674. doi: 10.3168/jds.2015-10538.

PMID:
26947297
14.

Prevalence and antibiotic resistance pattern of Salmonella serovars in integrated crop-livestock farms and their products sold in local markets.

Peng M, Salaheen S, Almario JA, Tesfaye B, Buchanan R, Biswas D.

Environ Microbiol. 2016 May;18(5):1654-65. doi: 10.1111/1462-2920.13265. Epub 2016 Mar 21.

PMID:
26914740
15.

KRAS and guanine nucleotide-binding protein mutations in pancreatic juice collected from the duodenum of patients at high risk for neoplasia undergoing endoscopic ultrasound.

Eshleman JR, Norris AL, Sadakari Y, Debeljak M, Borges M, Harrington C, Lin E, Brant A, Barkley T, Almario JA, Topazian M, Farrell J, Syngal S, Lee JH, Yu J, Hruban RH, Kanda M, Canto MI, Goggins M.

Clin Gastroenterol Hepatol. 2015 May;13(5):963-9.e4. doi: 10.1016/j.cgh.2014.11.028. Epub 2014 Dec 4.

16.

Evaluation of rhizobacterial indicators of tobacco black root rot suppressiveness in farmers' fields.

Kyselková M, Almario J, Kopecký J, Ságová-Marečková M, Haurat J, Muller D, Grundmann GL, Moënne-Loccoz Y.

Environ Microbiol Rep. 2014 Aug;6(4):346-53. doi: 10.1111/1758-2229.12131. Epub 2014 Jan 8.

PMID:
24992533
17.

Inhibition of growth and alteration of host cell interactions of Pasteurella multocida with natural byproducts.

Salaheen S, Almario JA, Biswas D.

Poult Sci. 2014 Jun;93(6):1375-82. doi: 10.3382/ps.2013-03828.

PMID:
24879687
18.

Physicochemical, mechanical, and molecular properties of nonlysogenic and p22-lysogenic Salmonella typhimurium treated with citrus oil.

Ahn J, Almario JA, Salaheen S, Biswas D.

J Food Prot. 2014 May;77(5):758-64. doi: 10.4315/0362-028X.JFP-13-449.

PMID:
24780330
19.

Prevalence of type III secretion system in effective biocontrol pseudomonads.

Almario J, Gobbin D, Défago G, Moënne-Loccoz Y, Rezzonico F.

Res Microbiol. 2014 May;165(4):300-4. doi: 10.1016/j.resmic.2014.03.008. Epub 2014 Apr 12.

PMID:
24726926
20.

Rhizosphere ecology and phytoprotection in soils naturally suppressive to Thielaviopsis black root rot of tobacco.

Almario J, Muller D, Défago G, Moënne-Loccoz Y.

Environ Microbiol. 2014 Jul;16(7):1949-60. doi: 10.1111/1462-2920.12459. Epub 2014 Apr 17. Review.

PMID:
24650207
21.

In vivo endomicroscopy improves detection of Barrett's esophagus-related neoplasia: a multicenter international randomized controlled trial (with video).

Canto MI, Anandasabapathy S, Brugge W, Falk GW, Dunbar KB, Zhang Z, Woods K, Almario JA, Schell U, Goldblum J, Maitra A, Montgomery E, Kiesslich R; Confocal Endomicroscopy for Barrett's Esophagus or Confocal Endomicroscopy for Barrett's Esophagus (CEBE) Trial Group.

Gastrointest Endosc. 2014 Feb;79(2):211-21. doi: 10.1016/j.gie.2013.09.020. Epub 2013 Nov 9.

22.

Effect of clay mineralogy on iron bioavailability and rhizosphere transcription of 2,4-diacetylphloroglucinol biosynthetic genes in biocontrol Pseudomonas protegens.

Almario J, Prigent-Combaret C, Muller D, Moënne-Loccoz Y.

Mol Plant Microbe Interact. 2013 May;26(5):566-74. doi: 10.1094/MPMI-11-12-0274-R.

23.

A new minimal approach in cochlear implant surgery: the Colombian experience.

Almario JE, Lora JG, Prieto JA.

Otolaryngol Head Neck Surg. 2005 Jul;133(1):147-9.

PMID:
16025068
24.

Quantitative urine cultures do not reliably detect renal candidiasis in rabbits.

Navarro EE, Almario JS, Schaufele RL, Bacher J, Walsh TJ.

J Clin Microbiol. 1997 Dec;35(12):3292-7.

25.

Detection of Candida casts in experimental renal candidiasis: implications for the diagnosis and pathogenesis of upper urinary tract infection.

Navarro EE, Almario JS, King C, Bacher J, Pizzo PA, Walsh TJ.

J Med Vet Mycol. 1994 Dec;32(6):415-26.

PMID:
7738724
26.

Hemodialysis-hemoperfusion in fulminant viral hepatitis.

Ramos CP, Almario JS.

Biomater Artif Cells Artif Organs. 1990;18(5):689-92.

PMID:
2099225
27.

Transrectal needle method for biopsy of the prostate: review of 90 cases.

Ostroff EB, Almario J, Kramer H.

Am Surg. 1975 Oct;41(10):659-61.

PMID:
1163910

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