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Items: 1 to 50 of 75

1.

Elucidating Duramycin's Bacterial Selectivity and Mode of Action on the Bacterial Cell Envelope.

Hasim S, Allison DP, Mendez B, Farmer AT, Pelletier DA, Retterer ST, Campagna SR, Reynolds TB, Doktycz MJ.

Front Microbiol. 2018 Feb 14;9:219. doi: 10.3389/fmicb.2018.00219. eCollection 2018.

2.

Automated Interpretation and Extraction of Topographic Information from Time of Flight Secondary Ion Mass Spectrometry Data.

Ievlev AV, Belianinov A, Jesse S, Allison DP, Doktycz MJ, Retterer ST, Kalinin SV, Ovchinnikova OS.

Sci Rep. 2017 Dec 6;7(1):17099. doi: 10.1038/s41598-017-17049-y.

3.

Imaging the Root Hair Morphology of Arabidopsis Seedlings in a Two-layer Microfluidic Platform.

Aufrecht JA, Ryan JM, Hasim S, Allison DP, Nebenführ A, Doktycz MJ, Retterer ST.

J Vis Exp. 2017 Aug 15;(126). doi: 10.3791/55971.

4.

β-(1,3)-Glucan Unmasking in Some Candida albicans Mutants Correlates with Increases in Cell Wall Surface Roughness and Decreases in Cell Wall Elasticity.

Hasim S, Allison DP, Retterer ST, Hopke A, Wheeler RT, Doktycz MJ, Reynolds TB.

Infect Immun. 2016 Dec 29;85(1). pii: e00601-16. doi: 10.1128/IAI.00601-16. Print 2017 Jan.

5.

Enteroaggregative Escherichia coli: surface protein dispersin increases bacterial uptake of ciprofloxacin.

Mortensen NP, Boisen N, Carey S, Kennel SJ, Fowlkes JD, Doktycz MJ, Nataro JP, Allison DP.

Int J Antimicrob Agents. 2013 Nov;42(5):462-5. doi: 10.1016/j.ijantimicag.2013.07.007. Epub 2013 Aug 15.

PMID:
24011504
6.

Layer-by-layer templated assembly of silica at the nanoscale.

Hinestrosa JP, Sutton JE, Allison DP, Doktycz MJ, Messman JM, Retterer ST.

Langmuir. 2013 Feb 19;29(7):2193-9. doi: 10.1021/la3042204. Epub 2013 Feb 7.

PMID:
23360298
7.

Bacterial immobilization for imaging by atomic force microscopy.

Allison DP, Sullivan CJ, Mortensen NP, Retterer ST, Doktycz M.

J Vis Exp. 2011 Aug 10;(54). pii: 2880. doi: 10.3791/2880.

8.

Monodispersed biocompatible silver sulfide nanoparticles: facile extracellular biosynthesis using the γ-proteobacterium, Shewanella oneidensis.

Suresh AK, Doktycz MJ, Wang W, Moon JW, Gu B, Meyer HM 3rd, Hensley DK, Allison DP, Phelps TJ, Pelletier DA.

Acta Biomater. 2011 Dec;7(12):4253-8. doi: 10.1016/j.actbio.2011.07.007. Epub 2011 Jul 14.

PMID:
21798382
9.

Effects of sub-minimum inhibitory concentrations of ciprofloxacin on enteroaggregative Escherichia coli and the role of the surface protein dispersin.

Mortensen NP, Fowlkes JD, Maggart M, Doktycz MJ, Nataro JP, Drusano G, Allison DP.

Int J Antimicrob Agents. 2011 Jul;38(1):27-34. doi: 10.1016/j.ijantimicag.2011.03.011. Epub 2011 May 13.

PMID:
21570813
10.

Biofabrication of discrete spherical gold nanoparticles using the metal-reducing bacterium Shewanella oneidensis.

Suresh AK, Pelletier DA, Wang W, Broich ML, Moon JW, Gu B, Allison DP, Joy DC, Phelps TJ, Doktycz MJ.

Acta Biomater. 2011 May;7(5):2148-52. doi: 10.1016/j.actbio.2011.01.023. Epub 2011 Jan 15.

PMID:
21241833
11.

Effects of engineered cerium oxide nanoparticles on bacterial growth and viability.

Pelletier DA, Suresh AK, Holton GA, McKeown CK, Wang W, Gu B, Mortensen NP, Allison DP, Joy DC, Allison MR, Brown SD, Phelps TJ, Doktycz MJ.

Appl Environ Microbiol. 2010 Dec;76(24):7981-9. doi: 10.1128/AEM.00650-10. Epub 2010 Oct 15.

12.

Atomic force microscopy of biological samples.

Allison DP, Mortensen NP, Sullivan CJ, Doktycz MJ.

Wiley Interdiscip Rev Nanomed Nanobiotechnol. 2010 Nov-Dec;2(6):618-34. doi: 10.1002/wnan.104. Review.

PMID:
20672388
13.

Silver nanocrystallites: biofabrication using Shewanella oneidensis, and an evaluation of their comparative toxicity on gram-negative and gram-positive bacteria.

Suresh AK, Pelletier DA, Wang W, Moon JW, Gu B, Mortensen NP, Allison DP, Joy DC, Phelps TJ, Doktycz MJ.

Environ Sci Technol. 2010 Jul 1;44(13):5210-5. doi: 10.1021/es903684r.

PMID:
20509652
14.

Diverse and conserved nano- and mesoscale structures of diatom silica revealed by atomic force microscopy.

Hildebrand M, Holton G, Joy DC, Doktycz MJ, Allison DP.

J Microsc. 2009 Aug;235(2):172-87. doi: 10.1111/j.1365-2818.2009.03198.x.

15.

Effects of colistin on surface ultrastructure and nanomechanics of Pseudomonas aeruginosa cells.

Mortensen NP, Fowlkes JD, Sullivan CJ, Allison DP, Larsen NB, Molin S, Doktycz MJ.

Langmuir. 2009 Apr 9;25(6):3728-33. doi: 10.1021/la803898g.

PMID:
19227989
16.

Biomineralization at the nanoscale learning from diatoms.

Allison DP, Dufrêne YF, Doktycz MJ, Hildebrand M.

Methods Cell Biol. 2008;90:61-86. doi: 10.1016/S0091-679X(08)00804-2. No abstract available.

PMID:
19195546
17.

Controlling the Dimensions of Carbon Nanofiber Structures through the Electropolymerization of Pyrrole.

Fletcher BL, McKnight TE, Fowlkes JD, Allison DP, Simpson ML, Doktycz MJ.

Synth Met. 2007 Apr;157(6-7):282-289.

18.

Application of AFM in understanding biomineral formation in diatoms.

Hildebrand M, Doktycz MJ, Allison DP.

Pflugers Arch. 2008 Apr;456(1):127-37. Epub 2007 Dec 6. Review.

PMID:
18058126
19.

Comparison of the indentation and elasticity of E. coli and its spheroplasts by AFM.

Sullivan CJ, Venkataraman S, Retterer ST, Allison DP, Doktycz MJ.

Ultramicroscopy. 2007 Oct;107(10-11):934-42. Epub 2007 May 7.

PMID:
17574761
20.

Cellular secretion studied by force microscopy.

Allison DP, Doktycz MJ.

J Cell Mol Med. 2006 Oct-Dec;10(4):847-56. Review.

21.

Automated image analysis of atomic force microscopy images of rotavirus particles.

Venkataraman S, Allison DP, Qi H, Morrell-Falvey JL, Kallewaard NL, Crowe JE Jr, Doktycz MJ.

Ultramicroscopy. 2006 Jun-Jul;106(8-9):829-37. Epub 2006 May 5.

PMID:
16730407
22.

Measuring cell surface elasticity on enteroaggregative Escherichia coli wild type and dispersin mutant by AFM.

Beckmann MA, Venkataraman S, Doktycz MJ, Nataro JP, Sullivan CJ, Morrell-Falvey JL, Allison DP.

Ultramicroscopy. 2006 Jun-Jul;106(8-9):695-702. Epub 2006 Apr 21.

PMID:
16682120
23.

Mounting of Escherichia coli spheroplasts for AFM imaging.

Sullivan CJ, Morrell JL, Allison DP, Doktycz MJ.

Ultramicroscopy. 2005 Nov;105(1-4):96-102. Epub 2005 Jul 13.

PMID:
16112809
24.

Surface patterning of silica nanostructures using bio-inspired templates and directed synthesis.

Coffman EA, Melechko AV, Allison DP, Simpson ML, Doktycz MJ.

Langmuir. 2004 Sep 28;20(20):8431-6.

PMID:
15379457
25.

AFM imaging of bacteria in liquid media immobilized on gelatin coated mica surfaces.

Doktycz MJ, Sullivan CJ, Hoyt PR, Pelletier DA, Wu S, Allison DP.

Ultramicroscopy. 2003 Oct-Nov;97(1-4):209-16.

PMID:
12801673
26.

Biomolecular force measurements and the atomic force microscope.

Allison DP, Hinterdorfer P, Han W.

Curr Opin Biotechnol. 2002 Feb;13(1):47-51. Review.

PMID:
11849957
27.

Spin-column isolation of DNA-protein interactions from complex protein mixtures for AFM imaging.

Hoyt PR, Doktycz MJ, Warmack RJ, Allison DP.

Ultramicroscopy. 2001 Jan;86(1-2):139-43.

PMID:
11215616
28.

Identifying sequence similarities between DNA molecules.

Hoyt PR, Doktycz MJ, Modrich P, Warmack RJ, Allison DP.

Ultramicroscopy. 2000 Feb;82(1-4):237-44.

PMID:
10741675
29.

Mapping individual cosmid DNAs by direct AFM imaging.

Allison DP, Kerper PS, Doktycz MJ, Thundat T, Modrich P, Larimer FW, Johnson DK, Hoyt PR, Mucenski ML, Warmack RJ.

Genomics. 1997 May 1;41(3):379-84.

PMID:
9169135
30.

Direct atomic force microscope imaging of EcoRI endonuclease site specifically bound to plasmid DNA molecules.

Allison DP, Kerper PS, Doktycz MJ, Spain JA, Modrich P, Larimer FW, Thundat T, Warmack RJ.

Proc Natl Acad Sci U S A. 1996 Aug 20;93(17):8826-9.

31.

Molecular electronics of a single photosystem I reaction center: studies with scanning tunneling microscopy and spectroscopy.

Lee I, Lee JW, Warmack RJ, Allison DP, Greenbaum E.

Proc Natl Acad Sci U S A. 1995 Mar 14;92(6):1965-9.

32.

Stretched DNA structures observed with atomic force microscopy.

Thundat T, Allison DP, Warmack RJ.

Nucleic Acids Res. 1994 Oct 11;22(20):4224-8.

33.

Atomic force microscopy of DNA on mica and chemically modified mica.

Thundat T, Allison DP, Warmack RJ, Brown GM, Jacobson KB, Schrick JJ, Ferrell TL.

Scanning Microsc. 1992 Dec;6(4):911-8.

PMID:
1295085
34.

Immobilization of DNA for scanning probe microscopy.

Allison DP, Bottomley LA, Thundat T, Brown GM, Woychik RP, Schrick JJ, Jacobson KB, Warmack RJ.

Proc Natl Acad Sci U S A. 1992 Nov 1;89(21):10129-33.

35.

Imaging isolated strands of DNA molecules by atomic force microscopy.

Thundat T, Allison DP, Warmack RJ, Ferrell TL.

Ultramicroscopy. 1992 Jul;42-44 ( Pt B):1101-6.

PMID:
1413247
36.

Scanning tunneling microscopy of DNA: a novel technique using radiolabeled DNA to evaluate chemically mediated attachment of DNA to surfaces.

Allison DP, Warmack RJ, Bottomley LA, Thundat T, Brown GM, Woychik RP, Schrick JJ, Jacobson KB, Ferrell TL.

Ultramicroscopy. 1992 Jul;42-44 ( Pt B):1088-94.

PMID:
1413245
37.

Electrostatic spraying of DNA molecules for investigation by scanning tunneling microscopy.

Thundat T, Warmack RJ, Allison DP, Ferrell TL.

Ultramicroscopy. 1992 Jul;42-44 ( Pt B):1083-7.

PMID:
1413244
38.

Electrochemically induced adsorption of radio-labeled DNA on gold and HOPG substrates for STM investigations.

Brown GM, Allison DP, Warmack RJ, Jacobson KB, Larimer FW, Woychik RP, Carrier WL.

Ultramicroscopy. 1991 Dec;38(3-4):253-64.

PMID:
1785142
40.

Scanning tunneling microscopy and spectroscopy of plasmid DNA.

Allison DP, Thompson JR, Jacobson KB, Warmack RJ, Ferrell TL.

Scanning Microsc. 1990 Sep;4(3):517-22.

PMID:
2080422
41.

Synthesis of a more stable osmium ammine electron-dense DNA stain.

Olins AL, Moyer BA, Kim SH, Allison DP.

J Histochem Cytochem. 1989 Mar;37(3):395-8.

PMID:
2465337
42.

Antibodies to mouse lung capillary endothelium.

Rorvik MC, Allison DP, Hotchkiss JA, Witschi HP, Kennel SJ.

J Histochem Cytochem. 1988 Jul;36(7):741-9.

PMID:
3290332
43.

Rat monoclonal antibodies to mouse lung components for analysis of fibrosis.

Kennel SJ, Hotchkiss JA, Rorvik MC, Allison DP, Foote LJ.

Exp Mol Pathol. 1987 Aug;47(1):110-24.

PMID:
2440715
44.

The construction and operation of a simple inexpensive slam freezing device for electron microscopy.

Allison DP, Daw CS, Rorvik MC.

J Microsc. 1987 Jul;147(Pt 1):103-8.

PMID:
3305955
45.
46.

Membrane-bound fractions of R6K plasmid DNA in Escherichia coli.

Archibold ER, Wilson JD, Allison DP, Sheehy RJ.

J Bacteriol. 1983 Oct;156(1):414-8.

47.

Electron microscopic comparison of the sequences of single-stranded genomes of mammalian parvoviruses by heteroduplex mapping.

Banerjee PT, Olson WH, Allison DP, Bates RC, Snyder CE, Mitra S.

J Mol Biol. 1983 May 25;166(3):257-72.

PMID:
6854648
48.
49.

Purification of supercoiled DNA of plasmid col E1 by RPC-5 chromatography.

Best AN, Allison DP, Novelli GD.

Anal Biochem. 1981 Jul 1;114(2):235-43. No abstract available.

PMID:
6272596
50.

Irreversible denaturation mapping of a pyrimidine-rich domain of a complex satellite DNA.

LaMarca ME, Allison DP, Skinner DM.

J Biol Chem. 1981 Jun 25;256(12):6475-9.

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