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Items: 4

1.

Global discovery of small RNAs in Yersinia pseudotuberculosis identifies Yersinia-specific small, noncoding RNAs required for virulence.

Koo JT, Alleyne TM, Schiano CA, Jafari N, Lathem WW.

Proc Natl Acad Sci U S A. 2011 Sep 13;108(37):E709-17. doi: 10.1073/pnas.1101655108. Epub 2011 Aug 29.

2.

Loqs and R2D2 act sequentially in the siRNA pathway in Drosophila.

Marques JT, Kim K, Wu PH, Alleyne TM, Jafari N, Carthew RW.

Nat Struct Mol Biol. 2010 Jan;17(1):24-30. doi: 10.1038/nsmb.1735. Epub 2009 Dec 27.

3.

Predicting the binding preference of transcription factors to individual DNA k-mers.

Alleyne TM, Peña-Castillo L, Badis G, Talukder S, Berger MF, Gehrke AR, Philippakis AA, Bulyk ML, Morris QD, Hughes TR.

Bioinformatics. 2009 Apr 15;25(8):1012-8. doi: 10.1093/bioinformatics/btn645. Epub 2008 Dec 16.

4.

Variation in homeodomain DNA binding revealed by high-resolution analysis of sequence preferences.

Berger MF, Badis G, Gehrke AR, Talukder S, Philippakis AA, Peña-Castillo L, Alleyne TM, Mnaimneh S, Botvinnik OB, Chan ET, Khalid F, Zhang W, Newburger D, Jaeger SA, Morris QD, Bulyk ML, Hughes TR.

Cell. 2008 Jun 27;133(7):1266-76. doi: 10.1016/j.cell.2008.05.024.

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