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Mechanism for IL-15-Driven B Cell Chronic Lymphocytic Leukemia Cycling: Roles for AKT and STAT5 in Modulating Cyclin D2 and DNA Damage Response Proteins.

Gupta R, Li W, Yan XJ, Barrientos J, Kolitz JE, Allen SL, Rai K, Chiorazzi N, Mongini PKA.

J Immunol. 2019 May 15;202(10):2924-2944. doi: 10.4049/jimmunol.1801142. Epub 2019 Apr 15.


Size-Selective Electrophoretic Deposition of Gold Nanoparticles Mediated by Hydroquinone Oxidation.

Allen SL, Zamborini FP.

Langmuir. 2019 Feb 12;35(6):2137-2145. doi: 10.1021/acs.langmuir.8b03904. Epub 2019 Feb 4.


Tomographic analysis of tangential viewing cameras (invited).

Meyer WH, Allen SL, Samuell CM, Fenstermacher ME.

Rev Sci Instrum. 2018 Oct;89(10):10K110. doi: 10.1063/1.5038586.


Laser calibration of the DIII-D coherence imaging system.

Allen SL, Samuell CM, Meyer WH, Howard J.

Rev Sci Instrum. 2018 Oct;89(10):10E110. doi: 10.1063/1.5038739.


The Transcriptional Response of Aedes aegypti with Variable Extrinsic Incubation Periods for Dengue Virus.

Koh C, Allen SL, Herbert RI, McGraw EA, Chenoweth SF.

Genome Biol Evol. 2018 Dec 1;10(12):3141-3151. doi: 10.1093/gbe/evy230.


Verification of Doppler coherence imaging for 2D ion velocity measurements on DIII-D.

Samuell CM, Allen SL, Meyer WH, Isler RC, Briesemeister A, Wilcox RS, Lasnier CJ, Mclean AG, Howard J.

Rev Sci Instrum. 2018 Sep;89(9):093502. doi: 10.1063/1.5039367.


E×B Flux Driven Detachment Bifurcation in the DIII-D Tokamak.

Jaervinen AE, Allen SL, Eldon D, Fenstermacher ME, Groth M, Hill DN, Leonard AW, McLean AG, Porter GD, Rognlien TD, Samuell CM, Wang HQ.

Phys Rev Lett. 2018 Aug 17;121(7):075001. doi: 10.1103/PhysRevLett.121.075001.


Genetic constraints on microevolutionary divergence of sex-biased gene expression.

Allen SL, Bonduriansky R, Chenoweth SF.

Philos Trans R Soc Lond B Biol Sci. 2018 Oct 5;373(1757). pii: 20170427. doi: 10.1098/rstb.2017.0427.


Mechanistic Insights into CpG DNA and IL-15 Synergy in Promoting B Cell Chronic Lymphocytic Leukemia Clonal Expansion.

Gupta R, Yan XJ, Barrientos J, Kolitz JE, Allen SL, Rai K, Chiorazzi N, Mongini PKA.

J Immunol. 2018 Sep 1;201(5):1570-1585. doi: 10.4049/jimmunol.1800591. Epub 2018 Aug 1.


A Genomic Reference Panel for Drosophila serrata.

Reddiex AJ, Allen SL, Chenoweth SF.

G3 (Bethesda). 2018 Mar 28;8(4):1335-1346. doi: 10.1534/g3.117.300487.


Mutational Pleiotropy and the Strength of Stabilizing Selection Within and Between Functional Modules of Gene Expression.

Collet JM, McGuigan K, Allen SL, Chenoweth SF, Blows MW.

Genetics. 2018 Apr;208(4):1601-1616. doi: 10.1534/genetics.118.300776. Epub 2018 Feb 1.


Family level variation in Wolbachia-mediated dengue virus blocking in Aedes aegypti.

Terradas G, Allen SL, Chenoweth SF, McGraw EA.

Parasit Vectors. 2017 Dec 28;10(1):622. doi: 10.1186/s13071-017-2589-3.


Impact of arch reobstruction and early hypertension on late hypertension after coarctation repair.

Lee MGY, Allen SL, Koleff J, Brink J, Konstantinov IE, Cheung MMH, Brizard CP, d'Udekem Y.

Eur J Cardiothorac Surg. 2018 Mar 1;53(3):531-537. doi: 10.1093/ejcts/ezx360.


Aggregation-Dependent Oxidation of Metal Nanoparticles.

Allen SL, Sharma JN, Zamborini FP.

J Am Chem Soc. 2017 Sep 20;139(37):12895-12898. doi: 10.1021/jacs.7b05957. Epub 2017 Sep 8.


Sexual selection on spontaneous mutations strengthens the between-sex genetic correlation for fitness.

Allen SL, McGuigan K, Connallon T, Blows MW, Chenoweth SF.

Evolution. 2017 Oct;71(10):2398-2409. doi: 10.1111/evo.13310. Epub 2017 Sep 13.


Light chain Fanconi syndrome in a patient with acute myeloid leukemia and monoclonal gammopathy of undetermined significance.

Ross DW, Wanchoo R, Guigova A, Ghiuzeli C, Allen SL, Jhaveri KD.

CEN Case Rep. 2016 Nov;5(2):238-241. doi: 10.1007/s13730-016-0232-3. Epub 2016 Aug 30.


Tuberculosis screening among HIV-infected patients: tuberculin skin test vs. interferon-gamma release assay.

Adams JW, Howe CJ, Andrews AC, Allen SL, Vinnard C.

AIDS Care. 2017 Dec;29(12):1504-1509. doi: 10.1080/09540121.2017.1325438. Epub 2017 May 9.


Romidepsin is effective and well tolerated in older patients with peripheral T-cell lymphoma: analysis of two phase II trials.

Shustov A, Coiffier B, Horwitz S, Sokol L, Pro B, Wolfson J, Balser B, Eisch R, Popplewell L, Prince HM, Allen SL, Piekarz R, Bates S.

Leuk Lymphoma. 2017 Oct;58(10):2335-2341. doi: 10.1080/10428194.2017.1295143. Epub 2017 Mar 7.


Single-Molecule Sequencing of the Drosophila serrata Genome.

Allen SL, Delaney EK, Kopp A, Chenoweth SF.

G3 (Bethesda). 2017 Mar 10;7(3):781-788. doi: 10.1534/g3.116.037598.


Sex-biased transcriptome divergence along a latitudinal gradient.

Allen SL, Bonduriansky R, Sgro CM, Chenoweth SF.

Mol Ecol. 2017 Mar;26(5):1256-1272. doi: 10.1111/mec.14015. Epub 2017 Feb 8.


Binding of CLL subset 4 B-cell receptor immunoglobulins to viable human memory B lymphocytes requires a distinctive IGKV somatic mutation.

Catera R, Liu Y, Gao C, Yan XJ, Magli A, Allen SL, Kolitz JE, Rai KR, Chu CC, Feizi T, Stamatopoulos K, Chiorazzi N.

Mol Med. 2017 Mar;23:1-12. doi: 10.2119/molmed.2017.00003. Epub 2017 Jan 12.


Asymmetries in the motional Stark effect emission on the DIII-D tokamak.

Victor BS, Holcomb CT, Allen SL, Meyer WH, Makowski MA, Thorman A.

Rev Sci Instrum. 2016 Nov;87(11):11E126.


Size-Dependent Electrophoretic Deposition of Catalytic Gold Nanoparticles.

Masitas RA, Allen SL, Zamborini FP.

J Am Chem Soc. 2016 Nov 30;138(47):15295-15298. Epub 2016 Nov 11.


Evolutionary potential of the extrinsic incubation period of dengue virus in Aedes aegypti.

Ye YH, Chenoweth SF, Carrasco AM, Allen SL, Frentiu FD, van den Hurk AF, Beebe NW, McGraw EA.

Evolution. 2016 Nov;70(11):2459-2469. doi: 10.1111/evo.13039. Epub 2016 Sep 2.


Chronic lymphocytic leukemia immunoglobulins display bacterial reactivity that converges and diverges from auto-/poly-reactivity and IGHV mutation status.

Hatzi K, Catera R, Moreno Atanasio C, Fischetti VA, Allen SL, Kolitz JE, Rai KR, Chu CC, Chiorazzi N.

Clin Immunol. 2016 Nov;172:44-51. doi: 10.1016/j.clim.2016.08.020. Epub 2016 Aug 29.


Fluorescence from Multiple Chromophore Hydrogen-Bonding States in the Far-Red Protein TagRFP675.

Konold PE, Yoon E, Lee J, Allen SL, Chapagain PP, Gerstman BS, Regmi CK, Piatkevich KD, Verkhusha VV, Joo T, Jimenez R.

J Phys Chem Lett. 2016 Aug 4;7(15):3046-51. doi: 10.1021/acs.jpclett.6b01172. Epub 2016 Jul 27.


Ibrutinib penetrates the blood brain barrier and shows efficacy in the therapy of Bing Neel syndrome.

Mason C, Savona S, Rini JN, Castillo JJ, Xu L, Hunter ZR, Treon SP, Allen SL.

Br J Haematol. 2017 Oct;179(2):339-341. doi: 10.1111/bjh.14218. Epub 2016 Jul 13. No abstract available.


Impact of irrigation flow rate and intrapericardial fluid on cooled-tip epicardial radiofrequency ablation.

Aryana A, O'Neill PG, Pujara DK, Singh SK, Bowers MR, Allen SL, d'Avila A.

Heart Rhythm. 2016 Aug;13(8):1602-11. doi: 10.1016/j.hrthm.2016.05.008. Epub 2016 May 7.


Chronic lymphocytic leukemia cells diversify and differentiate in vivo via a nonclassical Th1-dependent, Bcl-6-deficient process.

Patten PE, Ferrer G, Chen SS, Simone R, Marsilio S, Yan XJ, Gitto Z, Yuan C, Kolitz JE, Barrientos J, Allen SL, Rai KR, MacCarthy T, Chu CC, Chiorazzi N.

JCI Insight. 2016 Apr 7;1(4). pii: e86288.


Sequential development of two separate therapy-related myeloid neoplasms following radiotherapy for prostate cancer.

Oroszi G, Brody J, Yang T, Allen SL, Devoe C, Zhang X.

Leuk Lymphoma. 2016 Nov;57(11):2689-92. doi: 10.3109/10428194.2016.1154960. Epub 2016 Apr 20. No abstract available.


Pomalidomide reverses γ-globin silencing through the transcriptional reprogramming of adult hematopoietic progenitors.

Dulmovits BM, Appiah-Kubi AO, Papoin J, Hale J, He M, Al-Abed Y, Didier S, Gould M, Husain-Krautter S, Singh SA, Chan KW, Vlachos A, Allen SL, Taylor N, Marambaud P, An X, Gallagher PG, Mohandas N, Lipton JM, Liu JM, Blanc L.

Blood. 2016 Mar 17;127(11):1481-92. doi: 10.1182/blood-2015-09-667923. Epub 2015 Dec 17.


ABCs of SLEEPING: A review of the evidence behind pediatric sleep practice recommendations.

Allen SL, Howlett MD, Coulombe JA, Corkum PV.

Sleep Med Rev. 2016 Oct;29:1-14. doi: 10.1016/j.smrv.2015.08.006. Epub 2015 Sep 1. Review.


Identification and characterization of distinct IL-17F expression patterns and signaling pathways in chronic lymphocytic leukemia and normal B lymphocytes.

Sherry B, Jain P, Chiu PY, Leung L, Allen SL, Kolitz JE, Rai KR, Barrientos J, Liang S, Hawtin R, Chiorazzi N.

Immunol Res. 2015 Dec;63(1-3):216-27. doi: 10.1007/s12026-015-8722-5.


Subcutaneous injections of low doses of humanized anti-CD20 veltuzumab: a phase I study in chronic lymphocytic leukemia.

Kalaycio ME, George Negrea O, Allen SL, Rai KR, Abbasi RM, Horne H, Wegener WA, Goldenberg DM.

Leuk Lymphoma. 2016;57(4):803-11. doi: 10.3109/10428194.2015.1085531. Epub 2015 Oct 19.


A seven-gene expression panel distinguishing clonal expansions of pre-leukemic and chronic lymphocytic leukemia B cells from normal B lymphocytes.

McCarthy BA, Yancopoulos S, Tipping M, Yan XJ, Wang XP, Bennett F, Li W, Lesser M, Paul S, Boyle E, Moreno C, Catera R, Messmer BT, Cutrona G, Ferrarini M, Kolitz JE, Allen SL, Rai KR, Rawstron AC, Chiorazzi N.

Immunol Res. 2015 Dec;63(1-3):90-100. doi: 10.1007/s12026-015-8688-3.


Cytoplasmic myosin-exposed apoptotic cells appear with caspase-3 activation and enhance CLL cell viability.

Cui X, Zhang L, Magli AR, Catera R, Yan XJ, Griffin DO, Rothstein TL, Barrientos J, Kolitz JE, Allen SL, Rai KR, Chiorazzi N, Chu CC.

Leukemia. 2016 Jan;30(1):74-85. doi: 10.1038/leu.2015.204. Epub 2015 Jul 29.


Advanced Care Directives: Overcoming the Obstacles.

Allen SL, Davis KS, Rousseau PC, Iverson PJ, Mauldin PD, Moran WP.

J Grad Med Educ. 2015 Mar;7(1):91-4. doi: 10.4300/JGME-D-14-00145.1.


Tamibarotene in patients with acute promyelocytic leukaemia relapsing after treatment with all-trans retinoic acid and arsenic trioxide.

Sanford D, Lo-Coco F, Sanz MA, Di Bona E, Coutre S, Altman JK, Wetzler M, Allen SL, Ravandi F, Kantarjian H, Cortes JE.

Br J Haematol. 2015 Nov;171(4):471-7. doi: 10.1111/bjh.13607. Epub 2015 Jul 24.


High Prevalence of Hypertension and End-Organ Damage Late After Coarctation Repair in Normal Arches.

Lee MG, Allen SL, Kawasaki R, Kotevski A, Koleff J, Kowalski R, Cheung MM, Konstantinov IE, Brizard CP, d'Udekem Y.

Ann Thorac Surg. 2015 Aug;100(2):647-53. doi: 10.1016/j.athoracsur.2015.03.099. Epub 2015 Jun 30.


TLR-9 and IL-15 Synergy Promotes the In Vitro Clonal Expansion of Chronic Lymphocytic Leukemia B Cells.

Mongini PK, Gupta R, Boyle E, Nieto J, Lee H, Stein J, Bandovic J, Stankovic T, Barrientos J, Kolitz JE, Allen SL, Rai K, Chu CC, Chiorazzi N.

J Immunol. 2015 Aug 1;195(3):901-23. doi: 10.4049/jimmunol.1403189. Epub 2015 Jul 1.


Genomic Evidence that Sexual Selection Impedes Adaptation to a Novel Environment.

Chenoweth SF, Appleton NC, Allen SL, Rundle HD.

Curr Biol. 2015 Jul 20;25(14):1860-6. doi: 10.1016/j.cub.2015.05.034. Epub 2015 Jun 25.


The phenome-wide distribution of genetic variance.

Blows MW, Allen SL, Collet JM, Chenoweth SF, McGuigan K.

Am Nat. 2015 Jul;186(1):15-30. doi: 10.1086/681645. Epub 2015 May 12.


Brief Report: Gonorrhea and Chlamydia Testing Increasing but Still Lagging in HIV Clinics in the United States.

Berry SA, Ghanem KG, Mathews WC, Korthuis PT, Yehia BR, Agwu AL, Lehmann CU, Moore RD, Allen SL, Gebo KA; HIV Research Network.

J Acquir Immune Defic Syndr. 2015 Nov 1;70(3):275-9. doi: 10.1097/QAI.0000000000000711.


Successful pregnancy outcome in paroxysmal nocturnal hemoglobinuria (PNH) following escalated eculizumab dosing to control breakthrough hemolysis.

Sharma R, Keyzner A, Liu J, Bradley T, Allen SL.

Leuk Res Rep. 2015 May 16;4(1):36-8. doi: 10.1016/j.lrr.2015.05.001. eCollection 2015.


Association between incomplete surgical ligation of left atrial appendage and stroke and systemic embolization.

Aryana A, Singh SK, Singh SM, O'Neill PG, Bowers MR, Allen SL, Lewandowski SL, Vierra EC, d'Avila A.

Heart Rhythm. 2015 Jul;12(7):1431-7. doi: 10.1016/j.hrthm.2015.03.028. Epub 2015 May 18.


Romidepsin in peripheral and cutaneous T-cell lymphoma: mechanistic implications from clinical and correlative data.

Bates SE, Eisch R, Ling A, Rosing D, Turner M, Pittaluga S, Prince HM, Kirschbaum MH, Allen SL, Zain J, Geskin LJ, Joske D, Popplewell L, Cowen EW, Jaffe ES, Nichols J, Kennedy S, Steinberg SM, Liewehr DJ, Showe LC, Steakley C, Wright J, Fojo T, Litman T, Piekarz RL.

Br J Haematol. 2015 Jul;170(1):96-109. doi: 10.1111/bjh.13400. Epub 2015 Apr 19.


Phase III open-label randomized study of cytarabine in combination with amonafide L-malate or daunorubicin as induction therapy for patients with secondary acute myeloid leukemia.

Stone RM, Mazzola E, Neuberg D, Allen SL, Pigneux A, Stuart RK, Wetzler M, Rizzieri D, Erba HP, Damon L, Jang JH, Tallman MS, Warzocha K, Masszi T, Sekeres MA, Egyed M, Horst HA, Selleslag D, Solomon SR, Venugopal P, Lundberg AS, Powell B.

J Clin Oncol. 2015 Apr 10;33(11):1252-7. doi: 10.1200/JCO.2014.57.0952. Epub 2015 Mar 2.


Behavioral Pediatrics Feeding Assessment Scale in Young Children With Autism Spectrum Disorder: Psychometrics and Associations With Child and Parent Variables.

Allen SL, Smith IM, Duku E, Vaillancourt T, Szatmari P, Bryson S, Fombonne E, Volden J, Waddell C, Zwaigenbaum L, Roberts W, Mirenda P, Bennett T, Elsabbagh M, Georgiades S.

J Pediatr Psychol. 2015 Jul;40(6):581-90. doi: 10.1093/jpepsy/jsv006. Epub 2015 Feb 27.


B-cell precursor acute lymphoblastic leukemia with isolated t(14;19)(q32;q13) abnormality involving the CEBPG gene.

Haghi N, Brody J, Mahmood N, Gheewala D, Allen SL, Sreekantaiah C, Zhang X.

Leuk Lymphoma. 2015;56(10):2978-81. doi: 10.3109/10428194.2015.1011639. Epub 2015 Mar 2. Review. No abstract available.


Acute myeloid leukemia ontogeny is defined by distinct somatic mutations.

Lindsley RC, Mar BG, Mazzola E, Grauman PV, Shareef S, Allen SL, Pigneux A, Wetzler M, Stuart RK, Erba HP, Damon LE, Powell BL, Lindeman N, Steensma DP, Wadleigh M, DeAngelo DJ, Neuberg D, Stone RM, Ebert BL.

Blood. 2015 Feb 26;125(9):1367-76. doi: 10.1182/blood-2014-11-610543. Epub 2014 Dec 30.

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