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Items: 1 to 50 of 574

1.

Trace analysis of 61 emerging Br-, Cl-, and I-DBPs: New methods to achieve part-per-trillion quantification in drinking water.

Cuthbertson AA, Liberatore HK, Kimura SY, Allen JM, Bensussan AV, Richardson SD.

Anal Chem. 2020 Jan 17. doi: 10.1021/acs.analchem.9b04377. [Epub ahead of print]

PMID:
31950829
2.

Extensive host-switching of avian feather lice following the Cretaceous-Paleogene mass extinction event.

de Moya RS, Allen JM, Sweet AD, Walden KKO, Palma RL, Smith VS, Cameron SL, Valim MP, Galloway TD, Weckstein JD, Johnson KP.

Commun Biol. 2019 Nov 29;2(1):445. doi: 10.1038/s42003-019-0689-7.

PMID:
31925250
3.

Environmental DNA facilitates accurate, inexpensive, and multiyear population estimates of millions of anadromous fish.

Pochardt M, Allen JM, Hart T, Miller SDL, Yu DW, Levi T.

Mol Ecol Resour. 2019 Dec 8. doi: 10.1111/1755-0998.13123. [Epub ahead of print]

PMID:
31815343
4.

Extensive host-switching of avian feather lice following the Cretaceous-Paleogene mass extinction event.

de Moya RS, Allen JM, Sweet AD, Walden KKO, Palma RL, Smith VS, Cameron SL, Valim MP, Galloway TD, Weckstein JD, Johnson KP.

Commun Biol. 2019 Nov 29;2:445. doi: 10.1038/s42003-019-0689-7. eCollection 2019.

5.

Gut Microbiota and Cardiometabolic Risk Factors in Hemodialysis Patients: A Pilot Study.

Biruete A, Allen JM, Kistler BM, Jeong JH, Fitschen PJ, Swanson KS, Wilund KR.

Top Clin Nutr. 2019 Apr-Jun;34(2):153-160. doi: 10.1097/TIN.0000000000000170.

PMID:
31777415
6.

Angiotensin II: A New Vasopressor for the Treatment of Distributive Shock.

Allen JM, Gilbert BW.

Clin Ther. 2019 Dec;41(12):2594-2610. doi: 10.1016/j.clinthera.2019.09.014. Epub 2019 Oct 24. Review.

PMID:
31668356
7.

Fecal microbiota and metabolites are distinct in a pilot study of pediatric Crohn's disease patients with higher levels of perceived stress.

Mackner LM, Hatzakis E, Allen JM, Davies RH, Kim SC, Maltz RM, Bailey MT.

Psychoneuroendocrinology. 2020 Jan;111:104469. doi: 10.1016/j.psyneuen.2019.104469. Epub 2019 Oct 3.

PMID:
31654986
8.

Mice Deficient in Epithelial or Myeloid Cell Iκκβ Have Distinct Colonic Microbiomes and Increased Resistance to Citrobacter rodentium Infection.

Mackos AR, Allen JM, Kim E, Ladaika CA, Gharaibeh RZ, Moore C, Parry NMA, Boyaka PN, Bailey MT.

Front Immunol. 2019 Sep 10;10:2062. doi: 10.3389/fimmu.2019.02062. eCollection 2019.

9.

The importance of prandial insulin bolus timing with hybrid closed-loop systems.

Boughton CK, Hartnell S, Allen JM, Hovorka R.

Diabet Med. 2019 Dec;36(12):1716-1717. doi: 10.1111/dme.14116. Epub 2019 Sep 9. No abstract available.

PMID:
31441093
10.

Dietary Oligosaccharides Attenuate Stress-Induced Disruptions in Immune Reactivity and Microbial B-Vitamin Metabolism.

Allen JM, Jaggers RM, Solden LM, Loman BR, Davies RH, Mackos AR, Ladaika CA, Berg BM, Chichlowski M, Bailey MT.

Front Immunol. 2019 Jul 29;10:1774. doi: 10.3389/fimmu.2019.01774. eCollection 2019.

11.

Cefazolin Versus Anti-Staphylococcal Penicillins for the Treatment of Patients with Methicillin-Susceptible Staphylococcus aureus Infection: A Meta-Analysis with Trial Sequential Analysis.

Allen JM, Bakare L, Casapao AM, Klinker K, Childs-Kean LM, Pomputius AF.

Infect Dis Ther. 2019 Dec;8(4):671-686. doi: 10.1007/s40121-019-00259-4. Epub 2019 Aug 8.

12.

Ancient DNA from a 2,500-year-old Caribbean fossil places an extinct bird (Caracara creightoni) in a phylogenetic context.

Oswald JA, Allen JM, Witt KE, Folk RA, Albury NA, Steadman DW, Guralnick RP.

Mol Phylogenet Evol. 2019 Nov;140:106576. doi: 10.1016/j.ympev.2019.106576. Epub 2019 Aug 2.

PMID:
31381968
13.

Beyond clinical practice in pediatric psychology: Illustrative experiences in influencing practice changes, public opinion, and governmental policies.

Parris KR, Harman JL, Jurbergs N, Allen JM, Canavera KE.

Psychol Serv. 2019 Aug 5. doi: 10.1037/ser0000385. [Epub ahead of print]

PMID:
31380678
14.

For common community phylogenetic analyses, go ahead and use synthesis phylogenies.

Li D, Trotta L, Marx HE, Allen JM, Sun M, Soltis DE, Soltis PS, Guralnick RP, Baiser B.

Ecology. 2019 Sep;100(9):e02788. doi: 10.1002/ecy.2788. Epub 2019 Jul 9.

PMID:
31225900
15.

Young Children Have Higher Variability of Insulin Requirements: Observations During Hybrid Closed-Loop Insulin Delivery.

Dovc K, Boughton C, Tauschmann M, Thabit H, Bally L, Allen JM, Acerini CL, Arnolds S, de Beaufort C, Bergenstal RM, Campbell F, Criego A, Dunger DB, Elleri D, Evans ML, Fröhlich-Reiterer E, Hofer S, Kapellen T, Leelarathna L, Pieber TR, Rami-Merhar B, Shah VN, Sibayan J, Wilinska ME, Hovorka R; APCam11, AP@Home, and KidsAP Consortia.

Diabetes Care. 2019 Jul;42(7):1344-1347. doi: 10.2337/dc18-2625. Epub 2019 May 21.

PMID:
31221700
16.

A modular laboratory course using planarians to study genes involved in tissue regeneration.

Ochoa SD, Dores MR, Allen JM, Tran T, Osman M, Vázquez Castellanos NP, Trejo J, Zayas RM.

Biochem Mol Biol Educ. 2019 Sep;47(5):547-559. doi: 10.1002/bmb.21259. Epub 2019 Jun 13.

PMID:
31194289
17.

SMARCA4 inactivation defines a subset of undifferentiated uterine sarcomas with rhabdoid and small cell features and germline mutation association.

Lin DI, Allen JM, Hecht JL, Killian JK, Ngo NT, Edgerly C, Severson EA, Ali SM, Erlich RL, Ramkissoon SH, Vergilio JA, Ross JS, Elvin JA.

Mod Pathol. 2019 Nov;32(11):1675-1687. doi: 10.1038/s41379-019-0303-z. Epub 2019 Jun 12.

PMID:
31190001
18.

Assessing the efficacy, safety and utility of 6-month day-and-night automated closed-loop insulin delivery under free-living conditions compared with insulin pump therapy in children and adolescents with type 1 diabetes: an open-label, multicentre, multinational, single-period, randomised, parallel group study protocol.

Musolino G, Allen JM, Hartnell S, Wilinska ME, Tauschmann M, Boughton C, Campbell F, Denvir L, Trevelyan N, Wadwa P, DiMeglio L, Buckingham BA, Weinzimer S, Acerini CL, Hood K, Fox S, Kollman C, Sibayan J, Borgman S, Cheng P, Hovorka R.

BMJ Open. 2019 Jun 3;9(6):e027856. doi: 10.1136/bmjopen-2018-027856.

19.

Pain Education for Adolescents and Young Adults Living Beyond Cancer: An Interdisciplinary Meeting Report.

Heathcote LC, Allen JM, Gunn KM, Fox S, Harvie DS, Olver I, Skinner IW, Smith AG, Stanton TR, Whitford HS, Moseley GL.

J Adolesc Young Adult Oncol. 2019 Oct;8(5):529-533. doi: 10.1089/jayao.2019.0047. Epub 2019 May 31.

PMID:
31150299
20.

Reduced burden of diabetes and improved quality of life: Experiences from unrestricted day-and-night hybrid closed-loop use in very young children with type 1 diabetes.

Musolino G, Dovc K, Boughton CK, Tauschmann M, Allen JM, Nagl K, Fritsch M, Yong J, Metcalfe E, Schaeffer D, Fichelle M, Schierloh U, Thiele AG, Abt D, Kojzar H, Mader JK, Slegtenhorst S, Ashcroft N, Wilinska ME, Sibayan J, Cohen N, Kollman C, Hofer SE, Fröhlich-Reiterer E, Kapellen TM, Acerini CL, de Beaufort C, Campbell F, Rami-Merhar B, Hovorka R; Kidsap Consortium.

Pediatr Diabetes. 2019 Sep;20(6):794-799. doi: 10.1111/pedi.12872. Epub 2019 Jun 13.

21.

Rates of niche and phenotype evolution lag behind diversification in a temperate radiation.

Folk RA, Stubbs RL, Mort ME, Cellinese N, Allen JM, Soltis PS, Soltis DE, Guralnick RP.

Proc Natl Acad Sci U S A. 2019 May 28;116(22):10874-10882. doi: 10.1073/pnas.1817999116. Epub 2019 May 13.

22.

Disentangling the abundance-impact relationship for invasive species.

Bradley BA, Laginhas BB, Whitlock R, Allen JM, Bates AE, Bernatchez G, Diez JM, Early R, Lenoir J, Vilà M, Sorte CJB.

Proc Natl Acad Sci U S A. 2019 May 14;116(20):9919-9924. doi: 10.1073/pnas.1818081116. Epub 2019 Apr 29.

23.

A descriptive analysis of gut microbiota composition in differentially reared infant rhesus monkeys (Macaca mulatta) across the first 6 months of life.

Dettmer AM, Allen JM, Jaggers RM, Bailey MT.

Am J Primatol. 2019 Oct;81(10-11):e22969. doi: 10.1002/ajp.22969. Epub 2019 Apr 2.

PMID:
30941799
24.

Exercise and the Gut Microbiome: A Review of the Evidence, Potential Mechanisms, and Implications for Human Health.

Mailing LJ, Allen JM, Buford TW, Fields CJ, Woods JA.

Exerc Sport Sci Rev. 2019 Apr;47(2):75-85. doi: 10.1249/JES.0000000000000183. Review.

PMID:
30883471
25.

Key ^{19}Ne States Identified Affecting γ-Ray Emission from ^{18}F in Novae.

Hall MR, Bardayan DW, Baugher T, Lepailleur A, Pain SD, Ratkiewicz A, Ahn S, Allen JM, Anderson JT, Ayangeakaa AD, Blackmon JC, Burcher S, Carpenter MP, Cha SM, Chae KY, Chipps KA, Cizewski JA, Febbraro M, Hall O, Hu J, Jiang CL, Jones KL, Lee EJ, O'Malley PD, Ota S, Rasco BC, Santiago-Gonzalez D, Seweryniak D, Sims H, Smith K, Tan WP, Thompson P, Thornsberry C, Varner RL, Walter D, Wilson GL, Zhu S.

Phys Rev Lett. 2019 Feb 8;122(5):052701. doi: 10.1103/PhysRevLett.122.052701.

PMID:
30822026
26.

Participants' Experiences of, and Views About, Daytime Use of a Day-and-Night Hybrid Closed-Loop System in Real Life Settings: Longitudinal Qualitative Study.

Lawton J, Blackburn M, Rankin D, Allen JM, Campbell FM, Leelarathna L, Tauschmann M, Thabit H, Wilinska ME, Elleri D, Hovorka R.

Diabetes Technol Ther. 2019 Mar;21(3):119-127. doi: 10.1089/dia.2018.0306. Epub 2019 Feb 5.

27.

Development of Novel Micro-dystrophins with Enhanced Functionality.

Ramos JN, Hollinger K, Bengtsson NE, Allen JM, Hauschka SD, Chamberlain JS.

Mol Ther. 2019 Mar 6;27(3):623-635. doi: 10.1016/j.ymthe.2019.01.002. Epub 2019 Feb 1.

28.

Home Use of Day-and-Night Hybrid Closed-Loop Insulin Delivery in Very Young Children: A Multicenter, 3-Week, Randomized Trial.

Tauschmann M, Allen JM, Nagl K, Fritsch M, Yong J, Metcalfe E, Schaeffer D, Fichelle M, Schierloh U, Thiele AG, Abt D, Kojzar H, Mader JK, Slegtenhorst S, Barber N, Wilinska ME, Boughton C, Musolino G, Sibayan J, Cohen N, Kollman C, Hofer SE, Fröhlich-Reiterer E, Kapellen TM, Acerini CL, de Beaufort C, Campbell F, Rami-Merhar B, Hovorka R; KidsAP Consortium.

Diabetes Care. 2019 Apr;42(4):594-600. doi: 10.2337/dc18-1881. Epub 2019 Jan 28.

PMID:
30692242
29.

Fully automated sequence alignment methods are comparable to, and much faster than, traditional methods in large data sets: an example with hepatitis B virus.

Catanach TA, Sweet AD, Nguyen ND, Peery RM, Debevec AH, Thomer AK, Owings AC, Boyd BM, Katz AD, Soto-Adames FN, Allen JM.

PeerJ. 2019 Jan 3;7:e6142. doi: 10.7717/peerj.6142. eCollection 2019.

30.

Biodiversity synthesis across the green branches of the tree of life.

Allen JM, Folk RA, Soltis PS, Soltis DE, Guralnick RP.

Nat Plants. 2019 Jan;5(1):11-13. doi: 10.1038/s41477-018-0322-7. Epub 2018 Dec 31.

PMID:
30598535
31.

Environmental DNA for the enumeration and management of Pacific salmon.

Levi T, Allen JM, Bell D, Joyce J, Russell JR, Tallmon DA, Vulstek SC, Yang C, Yu DW.

Mol Ecol Resour. 2019 May;19(3):597-608. doi: 10.1111/1755-0998.12987. Epub 2019 Apr 10.

PMID:
30592374
32.

Spatial Phylogenetics of Florida Vascular Plants: The Effects of Calibration and Uncertainty on Diversity Estimates.

Allen JM, Germain-Aubrey CC, Barve N, Neubig KM, Majure LC, Laffan SW, Mishler BD, Owens HL, Smith SA, Whitten WM, Abbott JR, Soltis DE, Guralnick R, Soltis PS.

iScience. 2019 Jan 25;11:57-70. doi: 10.1016/j.isci.2018.12.002. Epub 2018 Dec 8.

33.

Genomic sequence capture of haemosporidian parasites: Methods and prospects for enhanced study of host-parasite evolution.

Barrow LN, Allen JM, Huang X, Bensch S, Witt CC.

Mol Ecol Resour. 2019 Mar;19(2):400-410. doi: 10.1111/1755-0998.12977.

PMID:
30554480
34.

Multivariate genomic predictions for age at puberty in tropically adapted beef heifers.

Engle BN, Corbet NJ, Allen JM, Laing AR, Fordyce G, McGowan MR, Burns BM, Lyons RE, Hayes BJ.

J Anim Sci. 2019 Jan 1;97(1):90-100. doi: 10.1093/jas/sky428.

35.

Phylogenomics and the evolution of hemipteroid insects.

Johnson KP, Dietrich CH, Friedrich F, Beutel RG, Wipfler B, Peters RS, Allen JM, Petersen M, Donath A, Walden KKO, Kozlov AM, Podsiadlowski L, Mayer C, Meusemann K, Vasilikopoulos A, Waterhouse RM, Cameron SL, Weirauch C, Swanson DR, Percy DM, Hardy NB, Terry I, Liu S, Zhou X, Misof B, Robertson HM, Yoshizawa K.

Proc Natl Acad Sci U S A. 2018 Dec 11;115(50):12775-12780. doi: 10.1073/pnas.1815820115. Epub 2018 Nov 26.

36.

Recent Updates in the Pharmacological Management of Sepsis and Septic Shock: A Systematic Review Focused on Fluid Resuscitation, Vasopressors, and Corticosteroids.

Allen JM, Feild C, Shoulders BR, Voils SA.

Ann Pharmacother. 2019 Apr;53(4):385-395. doi: 10.1177/1060028018812940. Epub 2018 Nov 8.

PMID:
30404539
37.

Planarians as models to investigate the bioactivity of gold(I) complexes in vivo.

Tunes LG, Allen JM, Zayas RM, do Monte-Neto RL.

Sci Rep. 2018 Nov 1;8(1):16180. doi: 10.1038/s41598-018-34558-6.

38.

Towards multi-breed genomic evaluations for female fertility of tropical beef cattle.

Hayes BJ, Corbet NJ, Allen JM, Laing AR, Fordyce G, Lyons R, McGowan MR, Burns BM.

J Anim Sci. 2019 Jan 1;97(1):55-62. doi: 10.1093/jas/sky417.

39.

Closed-loop insulin delivery in suboptimally controlled type 1 diabetes: a multicentre, 12-week randomised trial.

Tauschmann M, Thabit H, Bally L, Allen JM, Hartnell S, Wilinska ME, Ruan Y, Sibayan J, Kollman C, Cheng P, Beck RW, Acerini CL, Evans ML, Dunger DB, Elleri D, Campbell F, Bergenstal RM, Criego A, Shah VN, Leelarathna L, Hovorka R; APCam11 Consortium.

Lancet. 2018 Oct 13;392(10155):1321-1329. doi: 10.1016/S0140-6736(18)31947-0. Epub 2018 Oct 3. Erratum in: Lancet. 2018 Oct 13;392(10155):1310.

40.

Behavioral response to fiber feedingis cohort-dependent and associated with gut microbiota composition in mice.

Mailing LJ, Allen JM, Pence BD, Rytych J, Sun Y, Bhattacharya TK, Park P, Cross TL, McCusker RH, Swanson KS, Fahey GC, Rhodes JS, Kelley KW, Johnson RW, Woods JA.

Behav Brain Res. 2019 Feb 1;359:731-736. doi: 10.1016/j.bbr.2018.09.012. Epub 2018 Sep 19.

PMID:
30243767
41.

Impacts of Inference Method and Data set Filtering on Phylogenomic Resolution in a Rapid Radiation of Ground Squirrels (Xerinae: Marmotini).

Mclean BS, Bell KC, Allen JM, Helgen KM, Cook JA.

Syst Biol. 2019 Mar 1;68(2):298-316. doi: 10.1093/sysbio/syy064.

PMID:
30239963
42.

Butyrate and Dietary Soluble Fiber Improve Neuroinflammation Associated With Aging in Mice.

Matt SM, Allen JM, Lawson MA, Mailing LJ, Woods JA, Johnson RW.

Front Immunol. 2018 Aug 14;9:1832. doi: 10.3389/fimmu.2018.01832. eCollection 2018.

43.

Effects of endurance exercise training on inflammatory circulating progenitor cell content in lean and obese adults.

Niemiro GM, Allen JM, Mailing LJ, Khan NA, Holscher HD, Woods JA, De Lisio M.

J Physiol. 2018 Jul;596(14):2811-2822. doi: 10.1113/JP276023. Epub 2018 Jun 19.

44.

aTRAM 2.0: An Improved, Flexible Locus Assembler for NGS Data.

Allen JM, LaFrance R, Folk RA, Johnson KP, Guralnick RP.

Evol Bioinform Online. 2018 May 8;14:1176934318774546. doi: 10.1177/1176934318774546. eCollection 2018. Review.

45.

An enhanced Lactobacillus reuteri biofilm formulation that increases protection against experimental necrotizing enterocolitis.

Olson JK, Navarro JB, Allen JM, McCulloh CJ, Mashburn-Warren L, Wang Y, Varaljay VA, Bailey MT, Goodman SD, Besner GE.

Am J Physiol Gastrointest Liver Physiol. 2018 Sep 1;315(3):G408-G419. doi: 10.1152/ajpgi.00078.2018. Epub 2018 May 31.

46.

Simultaneous radiation of bird and mammal lice following the K-Pg boundary.

Johnson KP, Nguyen NP, Sweet AD, Boyd BM, Warnow T, Allen JM.

Biol Lett. 2018 May;14(5). pii: 20180141. doi: 10.1098/rsbl.2018.0141.

47.

Post-translational regulation of planarian regeneration.

Strand NS, Allen JM, Zayas RM.

Semin Cell Dev Biol. 2019 Mar;87:58-68. doi: 10.1016/j.semcdb.2018.04.009. Epub 2018 May 1. Review.

PMID:
29705300
48.

Measurement of Transverse Wakefields Induced by a Misaligned Positron Bunch in a Hollow Channel Plasma Accelerator.

Lindstrøm CA, Adli E, Allen JM, An W, Beekman C, Clarke CI, Clayton CE, Corde S, Doche A, Frederico J, Gessner SJ, Green SZ, Hogan MJ, Joshi C, Litos M, Lu W, Marsh KA, Mori WB, O'Shea BD, Vafaei-Najafabadi N, Yakimenko V.

Phys Rev Lett. 2018 Mar 23;120(12):124802. doi: 10.1103/PhysRevLett.120.124802.

PMID:
29694092
49.

Global shifts in the phenological synchrony of species interactions over recent decades.

Kharouba HM, Ehrlén J, Gelman A, Bolmgren K, Allen JM, Travers SE, Wolkovich EM.

Proc Natl Acad Sci U S A. 2018 May 15;115(20):5211-5216. doi: 10.1073/pnas.1714511115. Epub 2018 Apr 16.

50.

Worldwide Engagement for Digitizing Biocollections (WeDigBio): The Biocollections Community's Citizen-Science Space on the Calendar.

Ellwood ER, Kimberly P, Guralnick R, Flemons P, Love K, Ellis S, Allen JM, Best JH, Carter R, Chagnoux S, Costello R, Denslow MW, Dunckel BA, Ferriter MM, Gilbert EE, Goforth C, Groom Q, Krimmel ER, LaFrance R, Martinec JL, Miller AN, Minnaert-Grote J, Nash T, Oboyski P, Paul DL, Pearson KD, Pentcheff ND, Roberts MA, Seltzer CE, Soltis PS, Stephens R, Sweeney PW, von Konrat M, Wall A, Wetzer R, Zimmerman C, Mast AR.

Bioscience. 2018 Feb 1;68(2):112-124. doi: 10.1093/biosci/bix143. Epub 2018 Jan 17.

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