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Items: 1 to 50 of 77

1.

Metal-free class Ie ribonucleotide reductase from pathogens initiates catalysis with a tyrosine-derived dihydroxyphenylalanine radical.

Blaesi EJ, Palowitch GM, Hu K, Kim AJ, Rose HR, Alapati R, Lougee MG, Kim HJ, Taguchi AT, Tan KO, Laremore TN, Griffin RG, Krebs C, Matthews ML, Silakov A, Bollinger JM Jr, Allen BD, Boal AK.

Proc Natl Acad Sci U S A. 2018 Sep 17. pii: 201811993. doi: 10.1073/pnas.1811993115. [Epub ahead of print]

2.

4-D flow MRI aortic 3-D hemodynamics and wall shear stress remain stable over short-term follow-up in pediatric and young adult patients with bicuspid aortic valve.

Rose MJ, Rigsby CK, Berhane H, Bollache E, Jarvis K, Barker AJ, Schnell S, Allen BD, Robinson JD, Markl M.

Pediatr Radiol. 2018 Sep 10. doi: 10.1007/s00247-018-4257-y. [Epub ahead of print]

PMID:
30203126
3.

Tunable thermal transport and reversible thermal conductivity switching in topologically networked bio-inspired materials.

Tomko JA, Pena-Francesch A, Jung H, Tyagi M, Allen BD, Demirel MC, Hopkins PE.

Nat Nanotechnol. 2018 Aug 13. doi: 10.1038/s41565-018-0227-7. [Epub ahead of print]

PMID:
30104620
4.

Automated in vivo patch clamp evaluation of extracellular multielectrode array spike recording capability.

Allen BD, Moore-Kochlacs C, Bernstein JG, Kinney J, Scholvin J, Seoane L, Chronopoulos C, Lamantia C, Kodandaramaiah SB, Tegmark M, Boyden ES.

J Neurophysiol. 2018 Jul 11. doi: 10.1152/jn.00650.2017. [Epub ahead of print]

PMID:
29995597
5.

Footprints preserve terminal Pleistocene hunt? Human-sloth interactions in North America.

Bustos D, Jakeway J, Urban TM, Holliday VT, Fenerty B, Raichlen DA, Budka M, Reynolds SC, Allen BD, Love DW, Santucci VL, Odess D, Willey P, McDonald HG, Bennett MR.

Sci Adv. 2018 Apr 25;4(4):eaar7621. doi: 10.1126/sciadv.aar7621. eCollection 2018 Apr.

6.

ProtaBank: A repository for protein design and engineering data.

Wang CY, Chang PM, Ary ML, Allen BD, Chica RA, Mayo SL, Olafson BD.

Protein Sci. 2018 Jun;27(6):1113-1124. doi: 10.1002/pro.3406. Epub 2018 Apr 30.

7.

Persistent nature of alterations in cognition and neuronal circuit excitability after exposure to simulated cosmic radiation in mice.

Parihar VK, Maroso M, Syage A, Allen BD, Angulo MC, Soltesz I, Limoli CL.

Exp Neurol. 2018 Jul;305:44-55. doi: 10.1016/j.expneurol.2018.03.009. Epub 2018 Mar 11.

PMID:
29540322
8.

Accelerated real-time cardiac MRI using iterative sparse SENSE reconstruction: comparing performance in patients with sinus rhythm and atrial fibrillation.

Allen BD, Carr ML, Markl M, Zenge MO, Schmidt M, Nadar MS, Spottiswoode B, Collins JD, Carr JC.

Eur Radiol. 2018 Jul;28(7):3088-3096. doi: 10.1007/s00330-017-5283-0. Epub 2018 Jan 30.

PMID:
29383529
9.

Remediation of Radiation-Induced Cognitive Dysfunction through Oral Administration of the Neuroprotective Compound NSI-189.

Allen BD, Acharya MM, Lu C, Giedzinski E, Chmielewski NN, Quach D, Hefferan M, Johe KK, Limoli CL.

Radiat Res. 2018 Apr;189(4):345-353. doi: 10.1667/RR14879.1. Epub 2018 Jan 19.

10.

Visualizing the Reaction Cycle in an Iron(II)- and 2-(Oxo)-glutarate-Dependent Hydroxylase.

Mitchell AJ, Dunham NP, Martinie RJ, Bergman JA, Pollock CJ, Hu K, Allen BD, Chang WC, Silakov A, Bollinger JM Jr, Krebs C, Boal AK.

J Am Chem Soc. 2017 Oct 4;139(39):13830-13836. doi: 10.1021/jacs.7b07374. Epub 2017 Sep 20.

PMID:
28823155
11.

Corrigendum: Adenosine Kinase Inhibition Protects against Cranial Radiation-Induced Cognitive Dysfunction.

Acharya MM, Baulch JE, Lusardi TA, Allen BD, Chmielewski NN, Baddour AAD, Limoli CL, Boison D.

Front Mol Neurosci. 2017 Jul 10;10:218. doi: 10.3389/fnmol.2017.00218. eCollection 2017.

12.

Utilizing Palladium-Stabilized Zwitterions for the Construction of N-Heterocycles.

Allen BDW, Lakeland CP, Harrity JPA.

Chemistry. 2017 Oct 9;23(56):13830-13857. doi: 10.1002/chem.201702486. Epub 2017 Aug 21. Review.

13.

Epigenetic determinants of space radiation-induced cognitive dysfunction.

Acharya MM, Baddour AA, Kawashita T, Allen BD, Syage AR, Nguyen TH, Yoon N, Giedzinski E, Yu L, Parihar VK, Baulch JE.

Sci Rep. 2017 Feb 21;7:42885. doi: 10.1038/srep42885.

14.

Cosmic radiation exposure and persistent cognitive dysfunction.

Parihar VK, Allen BD, Caressi C, Kwok S, Chu E, Tran KK, Chmielewski NN, Giedzinski E, Acharya MM, Britten RA, Baulch JE, Limoli CL.

Sci Rep. 2016 Oct 10;6:34774. doi: 10.1038/srep34774.

15.

Elimination of microglia improves cognitive function following cranial irradiation.

Acharya MM, Green KN, Allen BD, Najafi AR, Syage A, Minasyan H, Le MT, Kawashita T, Giedzinski E, Parihar VK, West BL, Baulch JE, Limoli CL.

Sci Rep. 2016 Aug 12;6:31545. doi: 10.1038/srep31545.

16.

Adenosine Kinase Inhibition Protects against Cranial Radiation-Induced Cognitive Dysfunction.

Acharya MM, Baulch JE, Lusardi TA, Allen BD, Chmielewski NN, Baddour AA, Limoli CL, Boison D.

Front Mol Neurosci. 2016 Jun 3;9:42. doi: 10.3389/fnmol.2016.00042. eCollection 2016. Erratum in: Front Mol Neurosci. 2017 Jul 10;10 :218.

17.

A Pd-Catalyzed Synthesis of Functionalized Piperidines.

Allen BD, Connolly MJ, Harrity JP.

Chemistry. 2016 Sep 5;22(37):13000-3. doi: 10.1002/chem.201602586. Epub 2016 Jul 5.

18.

Molecular tandem repeat strategy for elucidating mechanical properties of high-strength proteins.

Jung H, Pena-Francesch A, Saadat A, Sebastian A, Kim DH, Hamilton RF, Albert I, Allen BD, Demirel MC.

Proc Natl Acad Sci U S A. 2016 Jun 7;113(23):6478-83. doi: 10.1073/pnas.1521645113. Epub 2016 May 24.

19.

Efficient method for volumetric assessment of peak blood flow velocity using 4D flow MRI.

Rose MJ, Jarvis K, Chowdhary V, Barker AJ, Allen BD, Robinson JD, Markl M, Rigsby CK, Schnell S.

J Magn Reson Imaging. 2016 Dec;44(6):1673-1682. doi: 10.1002/jmri.25305. Epub 2016 May 18.

20.

3D surface analysis of hippocampal microvasculature in the irradiated brain.

Craver BM, Acharya MM, Allen BD, Benke SN, Hultgren NW, Baulch JE, Limoli CL.

Environ Mol Mutagen. 2016 Jun;57(5):341-9. doi: 10.1002/em.22015. Epub 2016 May 13.

21.

Right ventricular assessment at cardiac MRI: initial clinical experience utilizing an IS-SENSE reconstruction.

Bogachkov A, Ayache JB, Allen BD, Murphy I, Carr ML, Spottiswoode B, Schmidt M, Zenge MO, Nadar MS, Zuehlsdorff S, Freed BH, Carr JC, Collins JD.

Int J Cardiovasc Imaging. 2016 Jul;32(7):1081-91. doi: 10.1007/s10554-016-0874-4. Epub 2016 Apr 18.

PMID:
27091733
22.

Cranial grafting of stem cell-derived microvesicles improves cognition and reduces neuropathology in the irradiated brain.

Baulch JE, Acharya MM, Allen BD, Ru N, Chmielewski NN, Martirosian V, Giedzinski E, Syage A, Park AL, Benke SN, Parihar VK, Limoli CL.

Proc Natl Acad Sci U S A. 2016 Apr 26;113(17):4836-41. doi: 10.1073/pnas.1521668113. Epub 2016 Apr 4.

23.

Highly accelerated cardiac MRI using iterative SENSE reconstruction: initial clinical experience.

Allen BD, Carr M, Botelho MP, Rahsepar AA, Markl M, Zenge MO, Schmidt M, Nadar MS, Spottiswoode B, Collins JD, Carr JC.

Int J Cardiovasc Imaging. 2016 Jun;32(6):955-63. doi: 10.1007/s10554-016-0859-3. Epub 2016 Feb 19.

PMID:
26894256
24.

Influence of beta-blocker therapy on aortic blood flow in patients with bicuspid aortic valve.

Allen BD, Markl M, Barker AJ, van Ooij P, Carr JC, Malaisrie SC, McCarthy P, Bonow RO, Kansal P.

Int J Cardiovasc Imaging. 2016 Apr;32(4):621-8. doi: 10.1007/s10554-015-0819-3. Epub 2016 Jan 27.

25.

Processes for design, construction and utilisation of arrays of light-emitting diodes and light-emitting diode-coupled optical fibres for multi-site brain light delivery.

Bernstein JG, Allen BD, Guerra AA, Boyden ES.

J Eng (Stevenage). 2015 May;2015. doi: 10.1049/joe.2014.0304. Epub 2015 May 14.

26.

4D flow MRI and T1 -Mapping: Assessment of altered cardiac hemodynamics and extracellular volume fraction in hypertrophic cardiomyopathy.

van Ooij P, Allen BD, Contaldi C, Garcia J, Collins J, Carr J, Choudhury L, Bonow RO, Barker AJ, Markl M.

J Magn Reson Imaging. 2016 Jan;43(1):107-14. doi: 10.1002/jmri.24962. Epub 2015 Jul 31.

27.

Persistent oxidative stress in human neural stem cells exposed to low fluences of charged particles.

Baulch JE, Craver BM, Tran KK, Yu L, Chmielewski N, Allen BD, Limoli CL.

Redox Biol. 2015 Aug;5:24-32. doi: 10.1016/j.redox.2015.03.001. Epub 2015 Mar 11.

28.

Principles of designing interpretable optogenetic behavior experiments.

Allen BD, Singer AC, Boyden ES.

Learn Mem. 2015 Mar 18;22(4):232-8. doi: 10.1101/lm.038026.114. Print 2015 Apr. Review.

29.

Thoracic aorta 3D hemodynamics in pediatric and young adult patients with bicuspid aortic valve.

Allen BD, van Ooij P, Barker AJ, Carr M, Gabbour M, Schnell S, Jarvis KB, Carr JC, Markl M, Rigsby C, Robinson JD.

J Magn Reson Imaging. 2015 Oct;42(4):954-63. doi: 10.1002/jmri.24847. Epub 2015 Jan 22.

30.

Three-dimensional haemodynamics in patients with obstructive and non-obstructive hypertrophic cardiomyopathy assessed by cardiac magnetic resonance.

Allen BD, Choudhury L, Barker AJ, van Ooij P, Collins JD, Bonow RO, Carr JC, Markl M.

Eur Heart J Cardiovasc Imaging. 2015 Jan;16(1):29-36. doi: 10.1093/ehjci/jeu146. Epub 2014 Aug 9.

31.

Noninvasive optical inhibition with a red-shifted microbial rhodopsin.

Chuong AS, Miri ML, Busskamp V, Matthews GA, Acker LC, Sørensen AT, Young A, Klapoetke NC, Henninger MA, Kodandaramaiah SB, Ogawa M, Ramanlal SB, Bandler RC, Allen BD, Forest CR, Chow BY, Han X, Lin Y, Tye KM, Roska B, Cardin JA, Boyden ES.

Nat Neurosci. 2014 Aug;17(8):1123-9. doi: 10.1038/nn.3752. Epub 2014 Jul 6.

32.

Targeted overexpression of mitochondrial catalase prevents radiation-induced cognitive dysfunction.

Parihar VK, Allen BD, Tran KK, Chmielewski NN, Craver BM, Martirosian V, Morganti JM, Rosi S, Vlkolinsky R, Acharya MM, Nelson GA, Allen AR, Limoli CL.

Antioxid Redox Signal. 2015 Jan 1;22(1):78-91. doi: 10.1089/ars.2014.5929.

33.

On the cost and prevention of iatrogenic multiple pregnancies.

Allen BD, Adashi EY, Jones HW.

Reprod Biomed Online. 2014 Sep;29(3):281-5. doi: 10.1016/j.rbmo.2014.04.012. Epub 2014 May 16.

PMID:
24934626
34.

4D flow imaging with MRI.

Stankovic Z, Allen BD, Garcia J, Jarvis KB, Markl M.

Cardiovasc Diagn Ther. 2014 Apr;4(2):173-92. doi: 10.3978/j.issn.2223-3652.2014.01.02. Review.

35.

A methodology to detect abnormal relative wall shear stress on the full surface of the thoracic aorta using four-dimensional flow MRI.

van Ooij P, Potters WV, Nederveen AJ, Allen BD, Collins J, Carr J, Malaisrie SC, Markl M, Barker AJ.

Magn Reson Med. 2015 Mar;73(3):1216-27. doi: 10.1002/mrm.25224. Epub 2014 Apr 18.

36.

Impact of aneurysm repair on thoracic aorta hemodynamics.

Allen BD, Barker AJ, Kansal P, Collins JD, Carr JC, Malaisrie SC, Markl M.

Circulation. 2013 Oct 22;128(17):e341-3. doi: 10.1161/CIRCULATIONAHA.112.000850. No abstract available.

37.

Time-resolved three-dimensional phase contrast MRI evaluation of bicuspid aortic valve and coarctation of the aorta.

Allen BD, Barker AJ, Carr JC, Silverberg RA, Markl M.

Eur Heart J Cardiovasc Imaging. 2013 Apr;14(4):399. doi: 10.1093/ehjci/jes225. Epub 2012 Oct 30. No abstract available.

38.

Mediastinal abscess formation after EUS-guided FNA in patients with sarcoidosis.

Allen BD, Penman I.

Gastrointest Endosc. 2012 Nov;76(5):1078-9; author reply 1079. doi: 10.1016/j.gie.2012.06.010. No abstract available.

PMID:
23078937
39.

Influence of documented history of coronary artery disease on outcomes in patients admitted for worsening heart failure with reduced ejection fraction in the EVEREST trial.

Mentz RJ, Allen BD, Kwasny MJ, Konstam MA, Udelson JE, Ambrosy AP, Fought AJ, Vaduganathan M, O'Connor CM, Zannad F, Maggioni AP, Swedberg K, Bonow RO, Gheorghiade M.

Eur J Heart Fail. 2013 Jan;15(1):61-8. doi: 10.1093/eurjhf/hfs139. Epub 2012 Sep 11.

40.

Balancing cost and precision in hospital accountability sampling.

Perla RJ, Allen BD.

J Healthc Qual. 2011 May-Jun;33(3):5-9. doi: 10.1111/j.1945-1474.2010.00106.x. Epub 2010 Jul 23.

PMID:
22414014
41.

Generation of longer emission wavelength red fluorescent proteins using computationally designed libraries.

Chica RA, Moore MM, Allen BD, Mayo SL.

Proc Natl Acad Sci U S A. 2010 Nov 23;107(47):20257-62. doi: 10.1073/pnas.1013910107. Epub 2010 Nov 8.

42.

Experimental library screening demonstrates the successful application of computational protein design to large structural ensembles.

Allen BD, Nisthal A, Mayo SL.

Proc Natl Acad Sci U S A. 2010 Nov 16;107(46):19838-43. doi: 10.1073/pnas.1012985107. Epub 2010 Nov 2.

43.

The future of set (single embryo transfer) in the United States.

Jones HW Jr, Allen BD.

Facts Views Vis Obgyn. 2010;2(2):111-4. No abstract available.

44.

An efficient algorithm for multistate protein design based on FASTER.

Allen BD, Mayo SL.

J Comput Chem. 2010 Apr 15;31(5):904-16. doi: 10.1002/jcc.21375.

PMID:
19637210
45.

Selective triplet-state formation during charge recombination in a fullerene/Bodipy molecular dyad (Bodipy=borondipyrromethene).

Ziessel R, Allen BD, Rewinska DB, Harriman A.

Chemistry. 2009 Jul 27;15(30):7382-93. doi: 10.1002/chem.200900440.

PMID:
19551782
46.

A long-term forecast of MRSA daily burden using logistic modeling.

Allen BD, Perla RJ.

Clin Lab Sci. 2009 Winter;22(1):26-9.

PMID:
19354025
47.

A poisson-based prediction model and warning system for MRSA daily burden.

Perla RJ, Allen BD.

Clin Lab Sci. 2009 Winter;22(1):22-5.

PMID:
19354024
48.

Acquisition of peak responding: what is learned?

Balci F, Gallistel CR, Allen BD, Frank KM, Gibson JM, Brunner D.

Behav Processes. 2009 Jan;80(1):67-75. doi: 10.1016/j.beproc.2008.09.010. Epub 2008 Oct 4.

49.

Conformational analysis of a covalently cross-linked Watson-Crick base pair model.

Jensen EA, Allen BD, Kishi Y, O'Leary DJ.

Bioorg Med Chem Lett. 2008 Nov 15;18(22):5884-7. doi: 10.1016/j.bmcl.2008.07.113. Epub 2008 Jul 31.

50.

Pharmacological manipulations of interval timing using the peak procedure in male C3H mice.

Balci F, Ludvig EA, Gibson JM, Allen BD, Frank KM, Kapustinski BJ, Fedolak TE, Brunner D.

Psychopharmacology (Berl). 2008 Nov;201(1):67-80. doi: 10.1007/s00213-008-1248-y. Epub 2008 Jul 23.

PMID:
18648777

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