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Items: 1 to 50 of 625

1.

Nanopore sequencing for fast determination of plasmids, phages, virulence markers, and antimicrobial resistance genes in Shiga toxin-producing Escherichia coli.

González-Escalona N, Allard MA, Brown EW, Sharma S, Hoffmann M.

PLoS One. 2019 Jul 30;14(7):e0220494. doi: 10.1371/journal.pone.0220494. eCollection 2019.

2.

Draft Genome Sequences of Antimicrobial-Resistant Shigella Clinical Isolates from Pakistan.

Lomonaco S, Lascols C, Crawford MA, Anderson K, Hodge DR, Fisher DJ, Pillai SP, Morse SA, Khan E, Hughes MA, Allard MW, Sharma SK.

Microbiol Resour Announc. 2019 Jul 25;8(30). pii: e00500-19. doi: 10.1128/MRA.00500-19.

3.

Paternal support for child sexual abuse victims: A qualitative study.

Cyr M, Allard MA, Fernet M, Hébert M.

Child Abuse Negl. 2019 Sep;95:104049. doi: 10.1016/j.chiabu.2019.104049. Epub 2019 Jun 26.

PMID:
31254950
4.

Biomechanical and functional properties of trophoblast cells exposed to Group B Streptococcus in vitro and the beneficial effects of uvaol treatment.

Botelho RM, Tenorio LPG, Silva ALM, Tanabe ELL, Pires KSN, Gonçalves CM, Santos JC, Marques ALX, Allard MJ, Bergeron JD, Sebire G, Silva ECO, Souza ST, Fonseca EJS, Borbely AU, Borbely KSC.

Biochim Biophys Acta Gen Subj. 2019 Sep;1863(9):1417-1428. doi: 10.1016/j.bbagen.2019.06.012. Epub 2019 Jun 26.

PMID:
31254547
5.

Sex-specific maternofetal innate immune responses triggered by group B Streptococci.

Allard MJ, Giraud A, Segura M, Sebire G.

Sci Rep. 2019 Jun 13;9(1):8587. doi: 10.1038/s41598-019-45029-x.

6.

Comparative Genomic Analysis of Virulence, Antimicrobial Resistance, and Plasmid Profiles of Salmonella Dublin Isolated from Sick Cattle, Retail Beef, and Humans in the United States.

Hsu CH, Li C, Hoffmann M, McDermott P, Abbott J, Ayers S, Tyson GH, Tate H, Yao K, Allard M, Zhao S.

Microb Drug Resist. 2019 May 31. doi: 10.1089/mdr.2019.0045. [Epub ahead of print]

PMID:
31149890
7.

All for one and one for all: the true potential of whole-genome sequencing.

Allard MW, Stevens EL, Brown EW.

Lancet Infect Dis. 2019 Jul;19(7):683-684. doi: 10.1016/S1473-3099(19)30172-0. Epub 2019 May 24. No abstract available.

PMID:
31133520
8.

Prognostic Value and Prediction of Extratumoral Microvascular Invasion for Hepatocellular Carcinoma.

Nitta H, Allard MA, Sebagh M, Ciacio O, Pittau G, Vibert E, Sa Cunha A, Cherqui D, Castaing D, Bismuth H, Guettier C, Lewin M, Samuel D, Baba H, Adam R.

Ann Surg Oncol. 2019 Aug;26(8):2568-2576. doi: 10.1245/s10434-019-07365-0. Epub 2019 May 3.

PMID:
31054040
9.

Individual knock out of glycine receptor alpha subunits identifies a specific requirement of glra1 for motor function in zebrafish.

Samarut E, Chalopin D, Riché R, Allard M, Liao M, Drapeau P.

PLoS One. 2019 May 2;14(5):e0216159. doi: 10.1371/journal.pone.0216159. eCollection 2019.

10.

Whole genome sequencing uses for foodborne contamination and compliance: Discovery of an emerging contamination event in an ice cream facility using whole genome sequencing.

Allard MW, Strain E, Rand H, Melka D, Correll WA, Hintz L, Stevens E, Timme R, Lomonaco S, Chen Y, Musser SM, Brown EW.

Infect Genet Evol. 2019 Apr 27;73:214-220. doi: 10.1016/j.meegid.2019.04.026. [Epub ahead of print] Review.

11.

What Biopsychosocial Factors are Associated With Work Ability in Conservatively Managed Patients with Cervical Radiculopathy? A Cross-Sectional Analysis.

Abbott A, Allard M, Kierkegaard M, Peolsson A, Dedering Å.

PM R. 2019 Apr 29. doi: 10.1002/pmrj.12177. [Epub ahead of print]

PMID:
31033147
12.

Pharmacokinetics and Pharmacodynamics of Once-daily Prolonged-release Tacrolimus in Liver Transplant Recipients.

Allard M, Puszkiel A, Conti F, Chevillard L, Kamar N, Noé G, White-Koning M, Thomas-Schoemann A, Simon T, Vidal M, Calmus Y, Blanchet B.

Clin Ther. 2019 May;41(5):882-896.e3. doi: 10.1016/j.clinthera.2019.03.006. Epub 2019 Apr 17.

PMID:
31003735
13.

Genome sequence analysis of 91 Salmonella Enteritidis isolates from mice caught on poultry farms in the mid 1990s.

Guard J, Cao G, Luo Y, Baugher JD, Davison S, Yao K, Hoffmann M, Zhang G, Likens N, Bell RL, Zheng J, Brown E, Allard M.

Genomics. 2019 Apr 8. pii: S0888-7543(18)30540-8. doi: 10.1016/j.ygeno.2019.04.005. [Epub ahead of print]

14.

Predictive model for microvascular invasion of hepatocellular carcinoma among candidates for either hepatic resection or liver transplantation.

Nitta H, Allard MA, Sebagh M, Karam V, Ciacio O, Pittau G, Vibert E, Sa Cunha A, Cherqui D, Castaing D, Bismuth H, Guettier C, Samuel D, Baba H, Adam R.

Surgery. 2019 Jun;165(6):1168-1175. doi: 10.1016/j.surg.2019.01.012. Epub 2019 Mar 14.

PMID:
30878140
15.

Effects of divergent selection upon adrenocortical activity on immune traits in pig.

Hervé J, Terenina E, Haurogné K, Bacou E, Kulikova E, Allard M, Billon Y, Bach JM, Mormède P, Lieubeau B.

BMC Vet Res. 2019 Mar 4;15(1):71. doi: 10.1186/s12917-019-1809-9.

16.

Peptides as cancer vaccines.

Calvo Tardón M, Allard M, Dutoit V, Dietrich PY, Walker PR.

Curr Opin Pharmacol. 2019 Mar 1;47:20-26. doi: 10.1016/j.coph.2019.01.007. [Epub ahead of print] Review.

PMID:
30831470
17.

Chronological occurrence of PI3KCA mutations in breast cancer liver metastases after repeat partial liver resection.

Ruiz A, Sebagh M, Saffroy R, Allard MA, Bosselut N, Hardoin G, Vasseur J, Hamelin J, Adam R, Morère JF, Lemoine A.

BMC Cancer. 2019 Feb 22;19(1):169. doi: 10.1186/s12885-019-5365-2.

18.

Phase I/II trial testing safety and immunogenicity of the multipeptide IMA950/poly-ICLC vaccine in newly diagnosed adult malignant astrocytoma patients.

Migliorini D, Dutoit V, Allard M, Hallez NG, Marinari E, Widmer V, Philippin G, Corlazzoli F, Gustave R, Kreutzfeldt M, Blazek N, Wasem J, Hottinger A, Koka A, Momjian S, Lobrinus A, Merkler D, Vargas MI, Walker PR, Patrikidou A, Dietrich PY.

Neuro Oncol. 2019 Feb 12. doi: 10.1093/neuonc/noz040. [Epub ahead of print]

PMID:
30753611
19.

Phylogenomic Pipeline Validation for Foodborne Pathogen Disease Surveillance.

Timme RE, Strain E, Baugher JD, Davis S, Gonzalez-Escalona N, Sanchez Leon M, Allard MW, Brown EW, Tallent S, Rand H.

J Clin Microbiol. 2019 Apr 26;57(5). pii: e01816-18. doi: 10.1128/JCM.01816-18. Print 2019 May. Review.

20.

Genomic surveillance links livestock production with the emergence and spread of multi-drug resistant non-typhoidal Salmonella in Mexico.

Delgado-Suárez EJ, Ortíz-López R, Gebreyes WA, Allard MW, Barona-Gómez F, Rubio-Lozano MS.

J Microbiol. 2019 Apr;57(4):271-280. doi: 10.1007/s12275-019-8421-3. Epub 2019 Feb 5.

PMID:
30721457
21.

Hepaticocholecystic duct: A pitfall of cholecystectomy.

Laurenzi A, Allard MA, Vibert E.

Clin Case Rep. 2018 Nov 14;7(1):227-228. doi: 10.1002/ccr3.1875. eCollection 2019 Jan.

22.

Permafrost is warming at a global scale.

Biskaborn BK, Smith SL, Noetzli J, Matthes H, Vieira G, Streletskiy DA, Schoeneich P, Romanovsky VE, Lewkowicz AG, Abramov A, Allard M, Boike J, Cable WL, Christiansen HH, Delaloye R, Diekmann B, Drozdov D, Etzelmüller B, Grosse G, Guglielmin M, Ingeman-Nielsen T, Isaksen K, Ishikawa M, Johansson M, Johannsson H, Joo A, Kaverin D, Kholodov A, Konstantinov P, Kröger T, Lambiel C, Lanckman JP, Luo D, Malkova G, Meiklejohn I, Moskalenko N, Oliva M, Phillips M, Ramos M, Sannel ABK, Sergeev D, Seybold C, Skryabin P, Vasiliev A, Wu Q, Yoshikawa K, Zheleznyak M, Lantuit H.

Nat Commun. 2019 Jan 16;10(1):264. doi: 10.1038/s41467-018-08240-4.

23.

Causal role of group B Streptococcus-induced acute chorioamnionitis in intrauterine growth retardation and cerebral palsy-like impairments.

Allard MJ, Brochu ME, Bergeron JD, Segura M, Sébire G.

J Dev Orig Health Dis. 2019 Jan 10:1-8. doi: 10.1017/S2040174418001083. [Epub ahead of print]

PMID:
30626456
24.

The use of next generation sequencing for improving food safety: Translation into practice.

Jagadeesan B, Gerner-Smidt P, Allard MW, Leuillet S, Winkler A, Xiao Y, Chaffron S, Van Der Vossen J, Tang S, Katase M, McClure P, Kimura B, Ching Chai L, Chapman J, Grant K.

Food Microbiol. 2019 Jun;79:96-115. doi: 10.1016/j.fm.2018.11.005. Epub 2018 Nov 17. Review.

25.

Genome divergence and increased virulence of outbreak associated Salmonella enterica subspecies enterica serovar Heidelberg.

Antony L, Behr M, Sockett D, Miskimins D, Aulik N, Christopher-Hennings J, Nelson E, Allard MW, Scaria J.

Gut Pathog. 2018 Dec 24;10:53. doi: 10.1186/s13099-018-0279-0. eCollection 2018.

26.

Late hepaticartery thrombosis after liver transplantation: which strategy? A single-center retrospective study.

Capelli R, Allard MA, Ciacio O, Pittau G, Golse N, Vibert E, Sa Cunha A, Castaing D, Cherqui D, Adam R.

Transpl Int. 2019 May;32(5):473-480. doi: 10.1111/tri.13394. Epub 2019 Jan 21.

PMID:
30582255
27.

Utilizing the Public GenomeTrakr Database for Foodborne Pathogen Traceback.

Timme RE, Sanchez Leon M, Allard MW.

Methods Mol Biol. 2019;1918:201-212. doi: 10.1007/978-1-4939-9000-9_17.

PMID:
30580411
28.

Zoonotic Source Attribution of Salmonella enterica Serotype Typhimurium Using Genomic Surveillance Data, United States.

Zhang S, Li S, Gu W, den Bakker H, Boxrud D, Taylor A, Roe C, Driebe E, Engelthaler DM, Allard M, Brown E, McDermott P, Zhao S, Bruce BB, Trees E, Fields PI, Deng X.

Emerg Infect Dis. 2019 Jan;25(1):82-91. doi: 10.3201/eid2501.180835.

29.

Complete Genome Sequence of a Vancomycin-Resistant Sequence Type 203 Enterococcus faecium Strain with vanA Belonging to Complex Type 859.

Hoffmann M, Yao K, Allard M, Sanchez M, Andersen LP, Hasman H, Hammerum AM.

Microbiol Resour Announc. 2018 Jul 19;7(2). pii: e00815-18. doi: 10.1128/MRA.00815-18. eCollection 2018 Jul.

30.

Draft Genome Sequences of 57 Salmonella enterica Strains from Selected U.S. Swine Feed Mills.

Lomonaco S, Magossi G, Sanchez Leon M, Miller D, Kastanis GJ, Tallent SM, Allard MW, Brown EW, Trinetta V.

Microbiol Resour Announc. 2018 Nov 1;7(17). pii: e01191-18. doi: 10.1128/MRA.01191-18. eCollection 2018 Nov.

31.

Diverse Vectors and Mechanisms Spread New Delhi Metallo-β-Lactamases among Carbapenem-Resistant Enterobacteriaceae in the Greater Boston Area.

Pecora N, Zhao X, Nudel K, Hoffmann M, Li N, Onderdonk AB, Yokoe D, Brown E, Allard M, Bry L.

Antimicrob Agents Chemother. 2019 Jan 29;63(2). pii: e02040-18. doi: 10.1128/AAC.02040-18. Print 2019 Feb.

32.

In-depth comparative analysis of Illumina® MiSeq run metrics: Development of a wet-lab quality assessment tool.

Kastanis GJ, Santana-Quintero LV, Sanchez-Leon M, Lomonaco S, Brown EW, Allard MW.

Mol Ecol Resour. 2019 Mar;19(2):377-387. doi: 10.1111/1755-0998.12973. Epub 2019 Jan 17.

33.

Genetic Diversity of Salmonella and Listeria Isolates from Food Facilities.

Wang YU, Pettengill JB, Pightling A, Timme R, Allard M, Strain E, Rand H.

J Food Prot. 2018 Dec;81(12):2082-2089. doi: 10.4315/0362-028X.JFP-18-093.

PMID:
30485763
34.

Salmonella enterica Phylogeny Based on Whole-Genome Sequencing Reveals Two New Clades and Novel Patterns of Horizontally Acquired Genetic Elements.

Worley J, Meng J, Allard MW, Brown EW, Timme RE.

MBio. 2018 Nov 27;9(6). pii: e02303-18. doi: 10.1128/mBio.02303-18.

35.

It's About Time: Rapid Implementation of a Hub-and-Spoke Care Delivery Model for Tertiary-Integrated Complex Care Services in a Northern Ontario Community.

Major N, Rouleau M, Krantz C, Morris K, Séguin F, Allard M, Lin JLL, Salenieks ME, Sultan R, Smith WG.

Healthc Q. 2018 Jul;21(2):35-40. doi: 10.12927/hcq.2018.25624.

PMID:
30474590
36.

Evaluation of a micro-spectrometer for the real-time assessment of liver graft with mild-to-moderate macrosteatosis: A proof of concept study.

Golse N, Cosse C, Allard MA, Laurenzi A, Tedeschi M, Guglielmo N, Fernandez-Sevilla E, Robert M, Tréchot B, Pietrasz D, Pittau G, Ciacio O, Sa Cunha A, Castaing D, Cherqui D, Adam R, Samuel D, Sebagh M, Vibert E.

J Hepatol. 2019 Mar;70(3):423-430. doi: 10.1016/j.jhep.2018.10.034. Epub 2018 Nov 3.

PMID:
30399385
37.

The EcoChip: A Wireless Multi-Sensor Platform for Comprehensive Environmental Monitoring.

Sylvain M, Lehoux F, Morency S, Faucher F, Bharucha E, Tremblay DM, Raymond F, Sarrazin D, Moineau S, Allard M, Corbeil J, Messaddeq Y, Gosselin B.

IEEE Trans Biomed Circuits Syst. 2018 Dec;12(6):1289-1300. doi: 10.1109/TBCAS.2018.2878404. Epub 2018 Oct 31.

PMID:
30387742
38.

γ-Aminobutyric acid receptor alpha 1 subunit loss of function causes genetic generalized epilepsy by impairing inhibitory network neurodevelopment.

Samarut É, Swaminathan A, Riché R, Liao M, Hassan-Abdi R, Renault S, Allard M, Dufour L, Cossette P, Soussi-Yanicostas N, Drapeau P.

Epilepsia. 2018 Nov;59(11):2061-2074. doi: 10.1111/epi.14576. Epub 2018 Oct 15.

PMID:
30324621
39.

Osimertinib and Low-Dose Itraconazole Combination: Vigilance in Elderly Patients.

Khoudour N, Martin A, Allard M, Tiako Meyo M, Blanchet B.

Ann Pharmacother. 2019 Mar;53(3):321-322. doi: 10.1177/1060028018807676. Epub 2018 Oct 11. No abstract available.

PMID:
30304935
40.

Genomics of Salmonella contaminating backyard production systems reveals persistence and transmission of genetically related Salmonella on a farm basis.

Toro M, Rivera D, Toledo V, Campos-Vargas R, Allard MW, Hamilton-West C, Moreno-Switt AI.

Zoonoses Public Health. 2018 Dec;65(8):1008-1014. doi: 10.1111/zph.12526. Epub 2018 Sep 27.

PMID:
30264433
41.

Genes significantly associated with lineage II food isolates of Listeria monocytogenes.

Pirone-Davies C, Chen Y, Pightling A, Ryan G, Wang Y, Yao K, Hoffmann M, Allard MW.

BMC Genomics. 2018 Sep 25;19(1):708. doi: 10.1186/s12864-018-5074-2.

42.

Tacrolimus diffusion across the peripheral mononuclear blood cell membrane: impact of drug transporters.

Tron C, Allard M, Petitcollin A, Ferrand-Sorre MJ, Verdier MC, Querzerho-Raguideau J, Blanchet B, Le Priol J, Roussel M, Deugnier Y, Bellissant E, Lemaitre F.

Fundam Clin Pharmacol. 2019 Feb;33(1):113-121. doi: 10.1111/fcp.12412. Epub 2018 Oct 14.

43.

Whole genome shotgun sequencing revealed highly polymorphic genome regions and genes in Escherichia coli O157:H7 isolates collected from a single feedlot.

Gao X, Yang X, Noll L, Shi X, Worley J, Allard M, Brown E, Nagaraja TG, Meng J.

PLoS One. 2018 Aug 28;13(8):e0202775. doi: 10.1371/journal.pone.0202775. eCollection 2018.

44.

Phylogenetic and antimicrobial resistance gene analysis of Salmonella Typhimurium strains isolated in Brazil by whole genome sequencing.

Almeida F, Seribelli AA, Medeiros MIC, Rodrigues DDP, de MelloVarani A, Luo Y, Allard MW, Falcão JP.

PLoS One. 2018 Aug 13;13(8):e0201882. doi: 10.1371/journal.pone.0201882. eCollection 2018.

45.

Pharmacokinetic variability of anticoagulants in patients with cancer-associated thrombosis: Clinical consequences.

Bellesoeur A, Thomas-Schoemann A, Allard M, Smadja D, Vidal M, Alexandre J, Goldwasser F, Blanchet B.

Crit Rev Oncol Hematol. 2018 Sep;129:102-112. doi: 10.1016/j.critrevonc.2018.06.015. Epub 2018 Jul 9. Review.

PMID:
30097228
46.

Changing of the Genomic Pattern of Salmonella Enteritidis Strains Isolated in Brazil Over a 48 year-period revealed by Whole Genome SNP Analyses.

Campioni F, Cao G, Kastanis G, Janies DA, Bergamini AMM, Rodrigues DDP, Stones R, Brown E, Allard MW, Falcão JP.

Sci Rep. 2018 Jul 11;8(1):10478. doi: 10.1038/s41598-018-28844-6.

47.

Whole genome sequencing reveals widespread distribution of typhoidal toxin genes and VirB/D4 plasmids in bovine-associated nontyphoidal Salmonella.

Delgado-Suárez EJ, Selem-Mojica N, Ortiz-López R, Gebreyes WA, Allard MW, Barona-Gómez F, Rubio-Lozano MS.

Sci Rep. 2018 Jun 29;8(1):9864. doi: 10.1038/s41598-018-28169-4.

48.

Closed Genome Sequence of Clostridium botulinum Strain CFSAN064329 (62A).

Wentz TG, Yao K, Schill KM, Reddy NR, Skinner GE, Morrissey TR, Wang Y, Muruvanda T, Manickam G, Pillai CA, Thirunavukkarasu N, Hoffmann M, Hammack TS, Brown EW, Allard MW, Sharma SK.

Genome Announc. 2018 Jun 28;6(26). pii: e00528-18. doi: 10.1128/genomeA.00528-18.

49.

Hyperactive behavior in female rats in utero-exposed to group B Streptococcus-induced inflammation.

Allard MJ, Brochu ME, Bergeron JD, Sebire G.

Int J Dev Neurosci. 2018 Oct;69:17-22. doi: 10.1016/j.ijdevneu.2018.06.005. Epub 2018 Jun 18.

PMID:
29920305
50.

GenomeTrakr proficiency testing for foodborne pathogen surveillance: an exercise from 2015.

Timme RE, Rand H, Sanchez Leon M, Hoffmann M, Strain E, Allard M, Roberson D, Baugher JD.

Microb Genom. 2018 Jul;4(7). doi: 10.1099/mgen.0.000185. Epub 2018 Jun 15.

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