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Phytohormone and Transcriptomic Analysis Reveals Endogenous Cytokinins Affect Kiwifruit Growth under Restricted Carbon Supply.

Nardozza S, Cooney J, Boldingh HL, Hewitt KG, Trower T, Jones D, Thrimawithana AH, Allan AC, Richardson AC.

Metabolites. 2020 Jan 4;10(1). pii: E23. doi: 10.3390/metabo10010023.


DNA demethylation is involved in the regulation of temperature-dependent anthocyanin accumulation in peach.

Zhu YC, Zhang B, Allan AC, Lin-Wang K, Zhao Y, Wang K, Chen KS, Xu CJ.

Plant J. 2020 Jan 10. doi: 10.1111/tpj.14680. [Epub ahead of print]


Carbon starvation reduces carbohydrate and anthocyanin accumulation in red-fleshed fruit via trehalose 6-phosphate and MYB27.

Nardozza S, Boldingh HL, Kashuba MP, Feil R, Jones D, Thrimawithana AH, Ireland HS, Philippe M, Wohlers MW, McGhie TK, Montefiori M, Lunn JE, Allan AC, Richardson AC.

Plant Cell Environ. 2019 Dec 13. doi: 10.1111/pce.13699. [Epub ahead of print]


The involvement of PybZIPa in light-induced anthocyanin accumulation via the activation of PyUFGT through binding to tandem G-boxes in its promoter.

Liu H, Su J, Zhu Y, Yao G, Allan AC, Ampomah-Dwamena C, Shu Q, Lin-Wang K, Zhang S, Wu J.

Hortic Res. 2019 Dec 1;6:134. doi: 10.1038/s41438-019-0217-4. eCollection 2019.


Apple B-box factors regulate light-responsive anthocyanin biosynthesis genes.

Plunkett BJ, Henry-Kirk R, Friend A, Diack R, Helbig S, Mouhu K, Tomes S, Dare AP, Espley RV, Putterill J, Allan AC.

Sci Rep. 2019 Nov 28;9(1):17762. doi: 10.1038/s41598-019-54166-2.


PpGST1, an anthocyanin-related glutathione S-transferase gene, is essential for fruit coloration in peach.

Zhao Y, Dong W, Zhu Y, Allan AC, Lin-Wang K, Xu C.

Plant Biotechnol J. 2019 Nov 6. doi: 10.1111/pbi.13291. [Epub ahead of print]


NtMYB3, an R2R3-MYB from Narcissus, Regulates Flavonoid Biosynthesis.

Anwar M, Yu W, Yao H, Zhou P, Allan AC, Zeng L.

Int J Mol Sci. 2019 Nov 1;20(21). pii: E5456. doi: 10.3390/ijms20215456.


Red to Brown: An Elevated Anthocyanic Response in Apple Drives Ethylene to Advance Maturity and Fruit Flesh Browning.

Espley RV, Leif D, Plunkett B, McGhie T, Henry-Kirk R, Hall M, Johnston JW, Punter MP, Boldingh H, Nardozza S, Volz RK, O'Donnell S, Allan AC.

Front Plant Sci. 2019 Oct 9;10:1248. doi: 10.3389/fpls.2019.01248. eCollection 2019.


Genome-wide analysis of coding and non-coding RNA reveals a conserved miR164-NAC regulatory pathway for fruit ripening.

Wang WQ, Wang J, Wu YY, Li DW, Allan AC, Yin XR.

New Phytol. 2020 Feb;225(4):1618-1634. doi: 10.1111/nph.16233. Epub 2019 Nov 11.


Two Y-chromosome-encoded genes determine sex in kiwifruit.

Akagi T, Pilkington SM, Varkonyi-Gasic E, Henry IM, Sugano SS, Sonoda M, Firl A, McNeilage MA, Douglas MJ, Wang T, Rebstock R, Voogd C, Datson P, Allan AC, Beppu K, Kataoka I, Tao R.

Nat Plants. 2019 Aug;5(8):801-809. doi: 10.1038/s41477-019-0489-6. Epub 2019 Aug 5.


AcFT promotes kiwifruit in vitro flowering when overexpressed and Arabidopsis flowering when expressed in the vasculature under its own promoter.

Moss SMA, Wang T, Voogd C, Brian LA, Wu R, Hellens RP, Allan AC, Putterill J, Varkonyi-Gasic E.

Plant Direct. 2018 Jul 10;2(7):e00068. doi: 10.1002/pld3.68. eCollection 2018 Jul.


Indigenous Perspectives and Gene Editing in Aotearoa New Zealand.

Hudson M, Mead ATP, Chagné D, Roskruge N, Morrison S, Wilcox PL, Allan AC.

Front Bioeng Biotechnol. 2019 Apr 11;7:70. doi: 10.3389/fbioe.2019.00070. eCollection 2019.


StMYB44 negatively regulates anthocyanin biosynthesis at high temperatures in tuber flesh of potato.

Liu Y, Lin-Wang K, Espley RV, Wang L, Li Y, Liu Z, Zhou P, Zeng L, Zhang X, Zhang J, Allan AC.

J Exp Bot. 2019 Aug 7;70(15):3809-3824. doi: 10.1093/jxb/erz194.


Histone modification and activation by SOC1-like and drought stress-related transcription factors may regulate AcSVP2 expression during kiwifruit winter dormancy.

Wu R, Wang T, Richardson AC, Allan AC, Macknight RC, Varkonyi-Gasic E.

Plant Sci. 2019 Apr;281:242-250. doi: 10.1016/j.plantsci.2018.12.001. Epub 2018 Dec 5.


PbrMYB169 positively regulates lignification of stone cells in pear fruit.

Xue C, Yao JL, Xue YS, Su GQ, Wang L, Lin LK, Allan AC, Zhang SL, Wu J.

J Exp Bot. 2019 Mar 27;70(6):1801-1814. doi: 10.1093/jxb/erz039.


Domestication: Colour and Flavour Joined by a Shared Transcription Factor.

Allan AC.

Curr Biol. 2019 Jan 21;29(2):R57-R59. doi: 10.1016/j.cub.2018.12.005.


Differential regulation of the anthocyanin profile in purple kiwifruit (Actinidia species).

Peng Y, Lin-Wang K, Cooney JM, Wang T, Espley RV, Allan AC.

Hortic Res. 2019 Jan 1;6:3. doi: 10.1038/s41438-018-0076-4. eCollection 2019.


Re-programming of Pseudomonas syringae pv. actinidiae gene expression during early stages of infection of kiwifruit.

McAtee PA, Brian L, Curran B, van der Linden O, Nieuwenhuizen NJ, Chen X, Henry-Kirk RA, Stroud EA, Nardozza S, Jayaraman J, Rikkerink EHA, Print CG, Allan AC, Templeton MD.

BMC Genomics. 2018 Nov 15;19(1):822. doi: 10.1186/s12864-018-5197-5.


Orange is not just a colour.

Allan AC.

Nat Plants. 2018 Nov;4(11):865-866. doi: 10.1038/s41477-018-0295-6. No abstract available.


Mutagenesis of kiwifruit CENTRORADIALIS-like genes transforms a climbing woody perennial with long juvenility and axillary flowering into a compact plant with rapid terminal flowering.

Varkonyi-Gasic E, Wang T, Voogd C, Jeon S, Drummond RSM, Gleave AP, Allan AC.

Plant Biotechnol J. 2019 May;17(5):869-880. doi: 10.1111/pbi.13021. Epub 2018 Oct 25.


MYBA From Blueberry (Vaccinium Section Cyanococcus) Is a Subgroup 6 Type R2R3MYB Transcription Factor That Activates Anthocyanin Production.

Plunkett BJ, Espley RV, Dare AP, Warren BAW, Grierson ERP, Cordiner S, Turner JL, Allan AC, Albert NW, Davies KM, Schwinn KE.

Front Plant Sci. 2018 Sep 11;9:1300. doi: 10.3389/fpls.2018.01300. eCollection 2018.


Activator-type R2R3-MYB genes induce a repressor-type R2R3-MYB gene to balance anthocyanin and proanthocyanidin accumulation.

Zhou H, Lin-Wang K, Wang F, Espley RV, Ren F, Zhao J, Ogutu C, He H, Jiang Q, Allan AC, Han Y.

New Phytol. 2019 Mar;221(4):1919-1934. doi: 10.1111/nph.15486. Epub 2018 Oct 13.


A kiwifruit (Actinidia deliciosa) R2R3-MYB transcription factor modulates chlorophyll and carotenoid accumulation.

Ampomah-Dwamena C, Thrimawithana AH, Dejnoprat S, Lewis D, Espley RV, Allan AC.

New Phytol. 2019 Jan;221(1):309-325. doi: 10.1111/nph.15362. Epub 2018 Aug 1.


MYBs Drive Novel Consumer Traits in Fruits and Vegetables.

Allan AC, Espley RV.

Trends Plant Sci. 2018 Aug;23(8):693-705. doi: 10.1016/j.tplants.2018.06.001. Review.


Characterization of a ripening-related transcription factor FcNAC1 from Fragaria chiloensis fruit.

Carrasco-Orellana C, Stappung Y, Mendez-Yañez A, Allan AC, Espley RV, Plunkett BJ, Moya-Leon MA, Herrera R.

Sci Rep. 2018 Jul 12;8(1):10524. doi: 10.1038/s41598-018-28226-y.


PbrmiR397a regulates lignification during stone cell development in pear fruit.

Xue C, Yao JL, Qin MF, Zhang MY, Allan AC, Wang DF, Wu J.

Plant Biotechnol J. 2019 Jan;17(1):103-117. doi: 10.1111/pbi.12950. Epub 2018 Jun 21.


A manually annotated Actinidia chinensis var. chinensis (kiwifruit) genome highlights the challenges associated with draft genomes and gene prediction in plants.

Pilkington SM, Crowhurst R, Hilario E, Nardozza S, Fraser L, Peng Y, Gunaseelan K, Simpson R, Tahir J, Deroles SC, Templeton K, Luo Z, Davy M, Cheng C, McNeilage M, Scaglione D, Liu Y, Zhang Q, Datson P, De Silva N, Gardiner SE, Bassett H, Chagné D, McCallum J, Dzierzon H, Deng C, Wang YY, Barron L, Manako K, Bowen J, Foster TM, Erridge ZA, Tiffin H, Waite CN, Davies KM, Grierson EP, Laing WA, Kirk R, Chen X, Wood M, Montefiori M, Brummell DA, Schwinn KE, Catanach A, Fullerton C, Li D, Meiyalaghan S, Nieuwenhuizen N, Read N, Prakash R, Hunter D, Zhang H, McKenzie M, Knäbel M, Harris A, Allan AC, Gleave A, Chen A, Janssen BJ, Plunkett B, Ampomah-Dwamena C, Voogd C, Leif D, Lafferty D, Souleyre EJF, Varkonyi-Gasic E, Gambi F, Hanley J, Yao JL, Cheung J, David KM, Warren B, Marsh K, Snowden KC, Lin-Wang K, Brian L, Martinez-Sanchez M, Wang M, Ileperuma N, Macnee N, Campin R, McAtee P, Drummond RSM, Espley RV, Ireland HS, Wu R, Atkinson RG, Karunairetnam S, Bulley S, Chunkath S, Hanley Z, Storey R, Thrimawithana AH, Thomson S, David C, Testolin R, Huang H, Hellens RP, Schaffer RJ.

BMC Genomics. 2018 Apr 16;19(1):257. doi: 10.1186/s12864-018-4656-3.


Discovery of {4-[4,9-bis(ethyloxy)-1-oxo-1,3-dihydro-2H-benzo[f]isoindol-2-yl]-2-fluorophenyl}acetic acid (GSK726701A), a novel EP4 receptor partial agonist for the treatment of pain.

Healy MP, Allan AC, Bailey K, Billinton A, Chessell IP, Clayton NM, Giblin GMP, Kay MA, Khaznadar T, Michel AD, Naylor A, Price H, Spalding DJ, Stevens DA, Swarbrick ME, Wilson AW.

Bioorg Med Chem Lett. 2018 Jun 1;28(10):1892-1896. doi: 10.1016/j.bmcl.2018.03.091. Epub 2018 Mar 31.


Ectopic Overexpression of a Novel R2R3-MYB, NtMYB2 from Chinese Narcissus Represses Anthocyanin Biosynthesis in Tobacco.

Anwar M, Wang G, Wu J, Waheed S, Allan AC, Zeng L.

Molecules. 2018 Mar 28;23(4). pii: E781. doi: 10.3390/molecules23040781.


The effect of 1-methylcyclopropene (1-MCP) on expression of ethylene receptor genes in durian pulp during ripening.

Thongkum M, Imsabai W, Burns P, McAtee PA, Schaffer RJ, Allan AC, Ketsa S.

Plant Physiol Biochem. 2018 Apr;125:232-238. doi: 10.1016/j.plaphy.2018.02.004. Epub 2018 Feb 10.


Solar UV light regulates flavonoid metabolism in apple (Malus x domestica).

Henry-Kirk RA, Plunkett B, Hall M, McGhie T, Allan AC, Wargent JJ, Espley RV.

Plant Cell Environ. 2018 Mar;41(3):675-688. doi: 10.1111/pce.13125. Epub 2018 Feb 5.


Kiwifruit SVP2 controls developmental and drought-stress pathways.

Wu R, Wang T, Warren BAW, Thomson SJ, Allan AC, Macknight RC, Varkonyi-Gasic E.

Plant Mol Biol. 2018 Feb;96(3):233-244. doi: 10.1007/s11103-017-0688-3. Epub 2017 Dec 8.


Molecular architectures of benzoic acid-specific type III polyketide synthases.

Stewart C Jr, Woods K, Macias G, Allan AC, Hellens RP, Noel JP.

Acta Crystallogr D Struct Biol. 2017 Dec 1;73(Pt 12):1007-1019. doi: 10.1107/S2059798317016618. Epub 2017 Nov 30.


Multiple Copies of a Simple MYB-Binding Site Confers Trans-regulation by Specific Flavonoid-Related R2R3 MYBs in Diverse Species.

Brendolise C, Espley RV, Lin-Wang K, Laing W, Peng Y, McGhie T, Dejnoprat S, Tomes S, Hellens RP, Allan AC.

Front Plant Sci. 2017 Oct 31;8:1864. doi: 10.3389/fpls.2017.01864. eCollection 2017.


Differential Sensitivity of Fruit Pigmentation to Ultraviolet Light between Two Peach Cultivars.

Zhao Y, Dong W, Wang K, Zhang B, Allan AC, Lin-Wang K, Chen K, Xu C.

Front Plant Sci. 2017 Sep 8;8:1552. doi: 10.3389/fpls.2017.01552. eCollection 2017.


Map-based cloning of the pear gene MYB114 identifies an interaction with other transcription factors to coordinately regulate fruit anthocyanin biosynthesis.

Yao G, Ming M, Allan AC, Gu C, Li L, Wu X, Wang R, Chang Y, Qi K, Zhang S, Wu J.

Plant J. 2017 Nov;92(3):437-451. doi: 10.1111/tpj.13666. Epub 2017 Sep 23.


SVP-like MADS Box Genes Control Dormancy and Budbreak in Apple.

Wu R, Tomes S, Karunairetnam S, Tustin SD, Hellens RP, Allan AC, Macknight RC, Varkonyi-Gasic E.

Front Plant Sci. 2017 Apr 4;8:477. doi: 10.3389/fpls.2017.00477. eCollection 2017.


Carotenoid accumulation in durian (Durio zibethinus) fruit is affected by ethylene via modulation of carotenoid pathway gene expression.

Wisutiamonkul A, Ampomah-Dwamena C, Allan AC, Ketsa S.

Plant Physiol Biochem. 2017 Jun;115:308-319. doi: 10.1016/j.plaphy.2017.03.021. Epub 2017 Mar 31.


Three FT and multiple CEN and BFT genes regulate maturity, flowering, and vegetative phenology in kiwifruit.

Voogd C, Brian LA, Wang T, Allan AC, Varkonyi-Gasic E.

J Exp Bot. 2017 Mar 1;68(7):1539-1553. doi: 10.1093/jxb/erx044.


Kiwifruit SVP2 gene prevents premature budbreak during dormancy.

Wu R, Wang T, Warren BAW, Allan AC, Macknight RC, Varkonyi-Gasic E.

J Exp Bot. 2017 Feb 1;68(5):1071-1082. doi: 10.1093/jxb/erx014.


Chloroplastic biosynthesis of melatonin and its involvement in protection of plants from salt stress.

Zheng X, Tan DX, Allan AC, Zuo B, Zhao Y, Reiter RJ, Wang L, Wang Z, Guo Y, Zhou J, Shan D, Li Q, Han Z, Kong J.

Sci Rep. 2017 Feb 1;7:41236. doi: 10.1038/srep41236.


Poor sleep predicts subacute postconcussion symptoms following mild traumatic brain injury.

Sullivan KA, Berndt SL, Edmed SL, Smith SS, Allan AC.

Appl Neuropsychol Adult. 2016 Nov-Dec;23(6):426-35. doi: 10.1080/23279095.2016.1172229. Epub 2016 May 16.


Actigraphically Measured Sleep-Wake Behavior After Mild Traumatic Brain Injury: A Case-Control Study.

Allan AC, Edmed SL, Sullivan KA, Karlsson LJ, Lange RT, Smith SS.

J Head Trauma Rehabil. 2017 Mar/Apr;32(2):E35-E45. doi: 10.1097/HTR.0000000000000222.


Functional diversification of the potato R2R3 MYB anthocyanin activators AN1, MYBA1, and MYB113 and their interaction with basic helix-loop-helix cofactors.

Liu Y, Lin-Wang K, Espley RV, Wang L, Yang H, Yu B, Dare A, Varkonyi-Gasic E, Wang J, Zhang J, Wang D, Allan AC.

J Exp Bot. 2016 Apr;67(8):2159-76. doi: 10.1093/jxb/erw014. Epub 2016 Feb 16.


The Citrus transcription factor, CitERF13, regulates citric acid accumulation via a protein-protein interaction with the vacuolar proton pump, CitVHA-c4.

Li SJ, Yin XR, Xie XL, Allan AC, Ge H, Shen SL, Chen KS.

Sci Rep. 2016 Feb 3;6:20151. doi: 10.1038/srep20151.


Environmental Light Exposure Is Associated with Increased Body Mass in Children.

Pattinson CL, Allan AC, Staton SL, Thorpe KJ, Smith SS.

PLoS One. 2016 Jan 6;11(1):e0143578. doi: 10.1371/journal.pone.0143578. eCollection 2016.


Peach MYB7 activates transcription of the proanthocyanidin pathway gene encoding leucoanthocyanidin reductase, but not anthocyanidin reductase.

Zhou H, Lin-Wang K, Liao L, Gu C, Lu Z, Allan AC, Han Y.

Front Plant Sci. 2015 Oct 26;6:908. doi: 10.3389/fpls.2015.00908. eCollection 2015.


The Phytoene synthase gene family of apple (Malus x domestica) and its role in controlling fruit carotenoid content.

Ampomah-Dwamena C, Driedonks N, Lewis D, Shumskaya M, Chen X, Wurtzel ET, Espley RV, Allan AC.

BMC Plant Biol. 2015 Jul 28;15:185. doi: 10.1186/s12870-015-0573-7.


Comparative Transcriptome Analysis of White and Purple Potato to Identify Genes Involved in Anthocyanin Biosynthesis.

Liu Y, Lin-Wang K, Deng C, Warran B, Wang L, Yu B, Yang H, Wang J, Espley RV, Zhang J, Wang D, Allan AC.

PLoS One. 2015 Jun 8;10(6):e0129148. doi: 10.1371/journal.pone.0129148. eCollection 2015.


Evaluating the Emergence of Reverse Intraverbals in Children with Autism.

Allan AC, Vladescu JC, Kisamore AN, Reeve SA, Sidener TM.

Anal Verbal Behav. 2014 Nov 21;31(1):59-75. doi: 10.1007/s40616-014-0025-8. eCollection 2015 Jun.

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