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Items: 12

1.

Principles of Systems Biology, No. 31.

Cho H, Berger B, Peng J, Galitzine C, Vitek O, Beltran PMJ, Cristea IM, Görtler F, Solbrig S, Wettig T, Oefner PJ, Spang R, Altenbuchinger M, Basso RS, Hochbaum D, Vandin F, Silverbush D, Cristea S, Yanovich G, Geiger T, Beerenwinkel N, Sharan R, Zhou Z, Luhmann N, Alikhan NF, Achtman M.

Cell Syst. 2018 Aug 22;7(2):133-135. doi: 10.1016/j.cels.2018.08.005.

PMID:
30138580
2.

GrapeTree: visualization of core genomic relationships among 100,000 bacterial pathogens.

Zhou Z, Alikhan NF, Sergeant MJ, Luhmann N, Vaz C, Francisco AP, Carriço JA, Achtman M.

Genome Res. 2018 Sep;28(9):1395-1404. doi: 10.1101/gr.232397.117. Epub 2018 Jul 26.

3.

Pan-genome Analysis of Ancient and Modern Salmonella enterica Demonstrates Genomic Stability of the Invasive Para C Lineage for Millennia.

Zhou Z, Lundstrøm I, Tran-Dien A, Duchêne S, Alikhan NF, Sergeant MJ, Langridge G, Fotakis AK, Nair S, Stenøien HK, Hamre SS, Casjens S, Christophersen A, Quince C, Thomson NR, Weill FX, Ho SYW, Gilbert MTP, Achtman M.

Curr Biol. 2018 Aug 6;28(15):2420-2428.e10. doi: 10.1016/j.cub.2018.05.058. Epub 2018 Jul 19.

4.

A genomic overview of the population structure of Salmonella.

Alikhan NF, Zhou Z, Sergeant MJ, Achtman M.

PLoS Genet. 2018 Apr 5;14(4):e1007261. doi: 10.1371/journal.pgen.1007261. eCollection 2018 Apr. Review.

5.

Comparative analysis of core genome MLST and SNP typing within a European Salmonella serovar Enteritidis outbreak.

Pearce ME, Alikhan NF, Dallman TJ, Zhou Z, Grant K, Maiden MCJ.

Int J Food Microbiol. 2018 Jun 2;274:1-11. doi: 10.1016/j.ijfoodmicro.2018.02.023. Epub 2018 Feb 28.

6.

Comparison of classical multi-locus sequence typing software for next-generation sequencing data.

Page AJ, Alikhan NF, Carleton HA, Seemann T, Keane JA, Katz LS.

Microb Genom. 2017 Jul 4;3(8):e000124. doi: 10.1099/mgen.0.000124. eCollection 2017 Aug. Review.

7.

Mechanisms Involved in Acquisition of blaNDM Genes by IncA/C2 and IncFIIY Plasmids.

Wailan AM, Sidjabat HE, Yam WK, Alikhan NF, Petty NK, Sartor AL, Williamson DA, Forde BM, Schembri MA, Beatson SA, Paterson DL, Walsh TR, Partridge SR.

Antimicrob Agents Chemother. 2016 Jun 20;60(7):4082-8. doi: 10.1128/AAC.00368-16. Print 2016 Jul.

8.

Molecular analysis of asymptomatic bacteriuria Escherichia coli strain VR50 reveals adaptation to the urinary tract by gene acquisition.

Beatson SA, Ben Zakour NL, Totsika M, Forde BM, Watts RE, Mabbett AN, Szubert JM, Sarkar S, Phan MD, Peters KM, Petty NK, Alikhan NF, Sullivan MJ, Gawthorne JA, Stanton-Cook M, Nhu NT, Chong TM, Yin WF, Chan KG, Hancock V, Ussery DW, Ulett GC, Schembri MA.

Infect Immun. 2015 May;83(5):1749-64. doi: 10.1128/IAI.02810-14. Epub 2015 Feb 9.

9.

BLAST Ring Image Generator (BRIG): simple prokaryote genome comparisons.

Alikhan NF, Petty NK, Ben Zakour NL, Beatson SA.

BMC Genomics. 2011 Aug 8;12:402. doi: 10.1186/1471-2164-12-402.

10.

Genome sequence of the emerging pathogen Aeromonas caviae.

Beatson SA, das Graças de Luna M, Bachmann NL, Alikhan NF, Hanks KR, Sullivan MJ, Wee BA, Freitas-Almeida AC, Dos Santos PA, de Melo JT, Squire DJ, Cunningham AF, Fitzgerald JR, Henderson IR.

J Bacteriol. 2011 Mar;193(5):1286-7. doi: 10.1128/JB.01337-10. Epub 2010 Dec 23.

11.

Statin induced myopathy presenting as mechanical musculoskeletal pain observed in two chiropractic patients.

Rodine RJ, Tibbles AC, Kim PS, Alikhan N.

J Can Chiropr Assoc. 2010 Mar;54(1):43-51.

12.

An evaluation of the effectiveness of a videotape programme on interobserver reliability in outcome assessment for osteoarthritis.

Bellamy N, Anjema C, Alikhan N, Chhina T, Dhanoa D, Edelist D, Esufali Z, Ismail F, Hill J, Campbell J.

Inflammopharmacology. 1999;7(2):143-54. doi: 10.1007/BF02918386.

PMID:
18597155

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