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Bacterial Semiochemicals and Transkingdom Interactions with Insects and Plants.

Calcagnile M, Tredici SM, Talà A, Alifano P.

Insects. 2019 Dec 8;10(12). pii: E441. doi: 10.3390/insects10120441. Review.


Airborne bacteria in the Central Mediterranean: Structure and role of meteorology and air mass transport.

Romano S, Di Salvo M, Rispoli G, Alifano P, Perrone MR, Talà A.

Sci Total Environ. 2019 Dec 20;697:134020. doi: 10.1016/j.scitotenv.2019.134020. Epub 2019 Aug 22.


The Microbiome of the Maculinea-Myrmica Host-Parasite Interaction.

Di Salvo M, Calcagnile M, Talà A, Tredici SM, Maffei ME, Schönrogge K, Barbero F, Alifano P.

Sci Rep. 2019 May 29;9(1):8048. doi: 10.1038/s41598-019-44514-7.


RhoTermPredict: an algorithm for predicting Rho-dependent transcription terminators based on Escherichia coli, Bacillus subtilis and Salmonella enterica databases.

Di Salvo M, Puccio S, Peano C, Lacour S, Alifano P.

BMC Bioinformatics. 2019 Mar 7;20(1):117. doi: 10.1186/s12859-019-2704-x.


Virulence Traits of a Serogroup C Meningococcus and Isogenic cssA Mutant, Defective in Surface-Exposed Sialic Acid, in a Murine Model of Meningitis.

Colicchio R, Pagliuca C, Ricci S, Scaglione E, Grandgirard D, Masouris I, Farina F, Pagliarulo C, Mantova G, Paragliola L, Leib SL, Koedel U, Pozzi G, Alifano P, Salvatore P.

Infect Immun. 2019 Mar 25;87(4). pii: e00688-18. doi: 10.1128/IAI.00688-18. Print 2019 Apr.


Stimulatory Effects of Methyl-β-cyclodextrin on Spiramycin Production and Physical-Chemical Characterization of Nonhost@Guest Complexes.

Calcagnile M, Bettini S, Damiano F, Talà A, Tredici SM, Pagano R, Di Salvo M, Siculella L, Fico D, De Benedetto GE, Valli L, Alifano P.

ACS Omega. 2018 Mar 31;3(3):2470-2478. doi: 10.1021/acsomega.7b01766. Epub 2018 Mar 1.


Mitochondrial ribosomal proteins involved in tellurite resistance in yeast Saccharomyces cerevisiae.

Pontieri P, Hartings H, Di Salvo M, Massardo DR, De Stefano M, Pizzolante G, Romano R, Troisi J, Del Giudice A, Alifano P, Del Giudice L.

Sci Rep. 2018 Aug 13;8(1):12022. doi: 10.1038/s41598-018-30479-6.


Characterization of two Pantoea strains isolated from extra-virgin olive oil.

Pizzolante G, Durante M, Rizzo D, Di Salvo M, Tredici SM, Tufariello M, De Paolis A, Talà A, Mita G, Alifano P, De Benedetto GE.

AMB Express. 2018 Jul 10;8(1):113. doi: 10.1186/s13568-018-0642-z.


Pirin: A novel redox-sensitive modulator of primary and secondary metabolism in Streptomyces.

Talà A, Damiano F, Gallo G, Pinatel E, Calcagnile M, Testini M, Fico D, Rizzo D, Sutera A, Renzone G, Scaloni A, De Bellis G, Siculella L, De Benedetto GE, Puglia AM, Peano C, Alifano P.

Metab Eng. 2018 Jul;48:254-268. doi: 10.1016/j.ymben.2018.06.008. Epub 2018 Jun 23.


G4PromFinder: an algorithm for predicting transcription promoters in GC-rich bacterial genomes based on AT-rich elements and G-quadruplex motifs.

Di Salvo M, Pinatel E, Talà A, Fondi M, Peano C, Alifano P.

BMC Bioinformatics. 2018 Feb 6;19(1):36. doi: 10.1186/s12859-018-2049-x.


Bacterial bioluminescence onset and quenching: a dynamical model for a quorum sensing-mediated property.

Side DD, Nassisi V, Pennetta C, Alifano P, Di Salvo M, Talà A, Chechkin A, Seno F, Trovato A.

R Soc Open Sci. 2017 Dec 13;4(12):171586. doi: 10.1098/rsos.171586. eCollection 2017 Dec.


Aglaophenia octodonta (Cnidaria, Hydrozoa) and the Associated Microbial Community: a Cooperative Alliance?

Stabili L, Gravili C, Pizzolante G, Lezzi M, Tredici SM, De Stefano M, Boero F, Alifano P.

Microb Ecol. 2018 Jul;76(1):258-271. doi: 10.1007/s00248-017-1127-3. Epub 2017 Dec 21.


Potential effects of an invasive seaweed (Caulerpa cylindracea, Sonder) on sedimentary organic matter and microbial metabolic activities.

Rizzo L, Pusceddu A, Stabili L, Alifano P, Fraschetti S.

Sci Rep. 2017 Sep 21;7(1):12113. doi: 10.1038/s41598-017-12556-4.


Secondary Metabolite Production from Industrially Relevant Bacteria is Enhanced by Organic Nanofibers.

Moffa M, Pasanisi D, Scarpa E, Marra AR, Alifano P, Pisignano D.

Biotechnol J. 2017 Nov;12(11). doi: 10.1002/biot.201700313. Epub 2017 Sep 21.


Time-Resolved Transcriptomics and Constraint-Based Modeling Identify System-Level Metabolic Features and Overexpression Targets to Increase Spiramycin Production in Streptomyces ambofaciens.

Fondi M, Pinatel E, Talà A, Damiano F, Consolandi C, Mattorre B, Fico D, Testini M, De Benedetto GE, Siculella L, De Bellis G, Alifano P, Peano C.

Front Microbiol. 2017 May 12;8:835. doi: 10.3389/fmicb.2017.00835. eCollection 2017.


The complete 12 Mb genome and transcriptome of Nonomuraea gerenzanensis with new insights into its duplicated "magic" RNA polymerase.

D'Argenio V, Petrillo M, Pasanisi D, Pagliarulo C, Colicchio R, Talà A, de Biase MS, Zanfardino M, Scolamiero E, Pagliuca C, Gaballo A, Cicatiello AG, Cantiello P, Postiglione I, Naso B, Boccia A, Durante M, Cozzuto L, Salvatore P, Paolella G, Salvatore F, Alifano P.

Sci Rep. 2016 Dec 21;6(1):18. doi: 10.1038/s41598-016-0025-0.


Cultivable gut bacteria provide a pathway for adaptation of Chrysolina herbacea to Mentha aquatica volatiles.

Pizzolante G, Cordero C, Tredici SM, Vergara D, Pontieri P, Del Giudice L, Capuzzo A, Rubiolo P, Kanchiswamy CN, Zebelo SA, Bicchi C, Maffei ME, Alifano P.

BMC Plant Biol. 2017 Mar 2;17(1):30. doi: 10.1186/s12870-017-0986-6.


Spatial distribution of the culturable bacterial community associated with the invasive alga Caulerpa cylindracea in the Mediterranean Sea.

Stabili L, Rizzo L, Pizzolante G, Alifano P, Fraschetti S.

Mar Environ Res. 2017 Apr;125:90-98. doi: 10.1016/j.marenvres.2017.02.001. Epub 2017 Feb 3.


Fitness Cost of Rifampin Resistance in Neisseria meningitidis: In Vitro Study of Mechanisms Associated with rpoB H553Y Mutation.

Colicchio R, Pagliuca C, Pastore G, Cicatiello AG, Pagliarulo C, Talà A, Scaglione E, Sammartino JC, Bucci C, Alifano P, Salvatore P.

Antimicrob Agents Chemother. 2015 Dec;59(12):7637-49. doi: 10.1128/AAC.01746-15. Epub 2015 Sep 28.


Tellurium as a valuable tool for studying the prokaryotic origins of mitochondria.

Pontieri P, De Stefano M, Massardo DR, Gunge N, Miyakawa I, Sando N, Pignone D, Pizzolante G, Romano R, Alifano P, Del Giudice L.

Gene. 2015 Apr 1;559(2):177-83. doi: 10.1016/j.gene.2015.01.060. Epub 2015 Jan 30.


Rifampicin-resistance, rpoB polymorphism and RNA polymerase genetic engineering.

Alifano P, Palumbo C, Pasanisi D, Talà A.

J Biotechnol. 2015 May 20;202:60-77. doi: 10.1016/j.jbiotec.2014.11.024. Epub 2014 Dec 3. Review.


The role of rab proteins in neuronal cells and in the trafficking of neurotrophin receptors.

Bucci C, Alifano P, Cogli L.

Membranes (Basel). 2014 Oct 6;4(4):642-77. doi: 10.3390/membranes4040642. Review.


The respiratory chains of four strains of the alkaliphilic Bacillus clausii.

Abbrescia A, Martino PL, Panelli D, Sardanelli AM, Papa S, Alifano P, Palese LL, Gaballo A.

FEBS Open Bio. 2014 Aug 4;4:714-21. doi: 10.1016/j.fob.2014.07.009. eCollection 2014.


Comparative genomics revealed key molecular targets to rapidly convert a reference rifamycin-producing bacterial strain into an overproducer by genetic engineering.

Peano C, Damiano F, Forcato M, Pietrelli A, Palumbo C, Corti G, Siculella L, Fuligni F, Tagliazucchi GM, De Benedetto GE, Bicciato S, De Bellis G, Alifano P.

Metab Eng. 2014 Nov;26:1-16. doi: 10.1016/j.ymben.2014.08.001. Epub 2014 Aug 19.


Exposure to static magnetic field stimulates quorum sensing circuit in luminescent Vibrio strains of the Harveyi clade.

Talà A, Delle Side D, Buccolieri G, Tredici SM, Velardi L, Paladini F, De Stefano M, Nassisi V, Alifano P.

PLoS One. 2014 Jun 24;9(6):e100825. doi: 10.1371/journal.pone.0100825. eCollection 2014.


Characterization of vibrios diversity in the mucus of the polychaete Myxicola infundibulum (Annellida, Polichaeta).

Stabili L, Giangrande A, Pizzolante G, Caruso G, Alifano P.

Microb Ecol. 2014 Jan;67(1):186-94. doi: 10.1007/s00248-013-0312-2. Epub 2013 Nov 6.


Serogroup-specific interaction of Neisseria meningitidis capsular polysaccharide with host cell microtubules and effects on tubulin polymerization.

Talà A, Cogli L, De Stefano M, Cammarota M, Spinosa MR, Bucci C, Alifano P.

Infect Immun. 2014 Jan;82(1):265-74. doi: 10.1128/IAI.00501-13. Epub 2013 Oct 28.


Sorghum, a healthy and gluten-free food for celiac patients as demonstrated by genome, biochemical, and immunochemical analyses.

Pontieri P, Mamone G, De Caro S, Tuinstra MR, Roemer E, Okot J, De Vita P, Ficco DB, Alifano P, Pignone D, Massardo DR, Del Giudice L.

J Agric Food Chem. 2013 Mar 13;61(10):2565-71. doi: 10.1021/jf304882k. Epub 2013 Mar 5.


Efficacy of silver treated catheters for haemodialysis in preventing bacterial adhesion.

Paladini F, Pollini M, Talà A, Alifano P, Sannino A.

J Mater Sci Mater Med. 2012 Aug;23(8):1983-90. doi: 10.1007/s10856-012-4674-7. Epub 2012 May 15.


Epidemic mortality of the sponge Ircinia variabilis (Schmidt, 1862) associated to proliferation of a Vibrio bacterium.

Stabili L, Cardone F, Alifano P, Tredici SM, Piraino S, Corriero G, Gaino E.

Microb Ecol. 2012 Oct;64(3):802-13. Epub 2012 May 10.


Comparative genomics and transcriptional profiles of Saccharopolyspora erythraea NRRL 2338 and a classically improved erythromycin over-producing strain.

Peano C, Talà A, Corti G, Pasanisi D, Durante M, Mita G, Bicciato S, De Bellis G, Alifano P.

Microb Cell Fact. 2012 Mar 8;11:32. doi: 10.1186/1475-2859-11-32.


Sphingomonas cynarae sp. nov., a proteobacterium that produces an unusual type of sphingan.

Talà A, Lenucci M, Gaballo A, Durante M, Tredici SM, Debowles DA, Pizzolante G, Marcuccio C, Carata E, Piro G, Carpita NC, Mita G, Alifano P.

Int J Syst Evol Microbiol. 2013 Jan;63(Pt 1):72-9. doi: 10.1099/ijs.0.032060-0. Epub 2012 Feb 10.


Glutamate utilization promotes meningococcal survival in vivo through avoidance of the neutrophil oxidative burst.

Talà A, Monaco C, Nagorska K, Exley RM, Corbett A, Zychlinsky A, Alifano P, Tang CM.

Mol Microbiol. 2011 Sep;81(5):1330-42. doi: 10.1111/j.1365-2958.2011.07766.x. Epub 2011 Jul 20.


Guanosine 5'-diphosphate 3'-diphosphate (ppGpp) as a negative modulator of polynucleotide phosphorylase activity in a 'rare' actinomycete.

Siculella L, Damiano F, di Summa R, Tredici SM, Alduina R, Gnoni GV, Alifano P.

Mol Microbiol. 2010 Aug;77(3):716-29. doi: 10.1111/j.1365-2958.2010.07240.x. Epub 2010 Jun 1.


Susceptibility to antibiotics of Vibrio sp. AO1 growing in pure culture or in association with its hydroid host Aglaophenia octodonta (Cnidaria, Hydrozoa).

Stabili L, Gravili C, Boero F, Tredici SM, Alifano P.

Microb Ecol. 2010 Apr;59(3):555-62. doi: 10.1007/s00248-009-9605-x. Epub 2009 Nov 4.


Effects of tellurite on growth of Saccharomyces cerevisiae.

Massardo DR, Pontieri P, Maddaluno L, De Stefano M, Alifano P, Del Giudice L.

Biometals. 2009 Dec;22(6):1089-94. doi: 10.1007/s10534-009-9259-7. Epub 2009 Sep 4.


The meningococcal ABC-Type L-glutamate transporter GltT is necessary for the development of experimental meningitis in mice.

Colicchio R, Ricci S, Lamberti F, Pagliarulo C, Pagliuca C, Braione V, Braccini T, Talà A, Montanaro D, Tripodi S, Cintorino M, Troncone G, Bucci C, Pozzi G, Bruni CB, Alifano P, Salvatore P.

Infect Immun. 2009 Sep;77(9):3578-87. doi: 10.1128/IAI.01424-08. Epub 2009 Jun 15.


Phenotypes and gene expression profiles of Saccharopolyspora erythraea rifampicin-resistant (rif) mutants affected in erythromycin production.

Carata E, Peano C, Tredici SM, Ferrari F, Talà A, Corti G, Bicciato S, De Bellis G, Alifano P.

Microb Cell Fact. 2009 Mar 30;8:18. doi: 10.1186/1475-2859-8-18.


Activation of dormant bacterial genes by Nonomuraea sp. strain ATCC 39727 mutant-type RNA polymerase.

Talà A, Wang G, Zemanova M, Okamoto S, Ochi K, Alifano P.

J Bacteriol. 2009 Feb;191(3):805-14. doi: 10.1128/JB.01311-08. Epub 2008 Dec 1.


The HrpB-HrpA two-partner secretion system is essential for intracellular survival of Neisseria meningitidis.

Talà A, Progida C, De Stefano M, Cogli L, Spinosa MR, Bucci C, Alifano P.

Cell Microbiol. 2008 Dec;10(12):2461-82. doi: 10.1111/j.1462-5822.2008.01222.x. Epub 2008 Aug 25.


The microbial community of Vetiver root and its involvement into essential oil biogenesis.

Del Giudice L, Massardo DR, Pontieri P, Bertea CM, Mombello D, Carata E, Tredici SM, Talà A, Mucciarelli M, Groudeva VI, De Stefano M, Vigliotta G, Maffei ME, Alifano P.

Environ Microbiol. 2008 Oct;10(10):2824-41. doi: 10.1111/j.1462-2920.2008.01703.x. Epub 2008 Jul 25.


Dictyostelium discoideum as a model host for meningococcal pathogenesis.

Colucci AM, Peracino B, Tala A, Bozzaro S, Alifano P, Bucci C.

Med Sci Monit. 2008 Jul;14(7):BR134-40.


Characterization of the Rab7K157N mutant protein associated with Charcot-Marie-Tooth type 2B.

De Luca A, Progida C, Spinosa MR, Alifano P, Bucci C.

Biochem Biophys Res Commun. 2008 Jul 25;372(2):283-7. doi: 10.1016/j.bbrc.2008.05.060. Epub 2008 May 21.


Epibiotic Vibrio luminous bacteria isolated from some hydrozoa and bryozoa species.

Stabili L, Gravili C, Tredici SM, Piraino S, Talà A, Boero F, Alifano P.

Microb Ecol. 2008 Nov;56(4):625-36. doi: 10.1007/s00248-008-9382-y. Epub 2008 Apr 25.


Functional characterization of Rab7 mutant proteins associated with Charcot-Marie-Tooth type 2B disease.

Spinosa MR, Progida C, De Luca A, Colucci AM, Alifano P, Bucci C.

J Neurosci. 2008 Feb 13;28(7):1640-8. doi: 10.1523/JNEUROSCI.3677-07.2008.


The Neisseria meningitidis capsule is important for intracellular survival in human cells.

Spinosa MR, Progida C, Talà A, Cogli L, Alifano P, Bucci C.

Infect Immun. 2007 Jul;75(7):3594-603. Epub 2007 Apr 30.


Clonothrix fusca Roze 1896, a filamentous, sheathed, methanotrophic gamma-proteobacterium.

Vigliotta G, Nutricati E, Carata E, Tredici SM, De Stefano M, Pontieri P, Massardo DR, Prati MV, De Bellis L, Alifano P.

Appl Environ Microbiol. 2007 Jun;73(11):3556-65. Epub 2007 Apr 6.


Nitrite metabolism in Debaryomyces hansenii TOB-Y7, a yeast strain involved in tobacco fermentation.

Vigliotta G, Di Giacomo M, Carata E, Massardo DR, Tredici SM, Silvestro D, Paolino M, Pontieri P, Del Giudice L, Parente D, Alifano P.

Appl Microbiol Biotechnol. 2007 Jun;75(3):633-45. Epub 2007 Feb 22.


Microbial community structure and dynamics of dark fire-cured tobacco fermentation.

Di Giacomo M, Paolino M, Silvestro D, Vigliotta G, Imperi F, Visca P, Alifano P, Parente D.

Appl Environ Microbiol. 2007 Feb;73(3):825-37. Epub 2006 Dec 1.

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