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Effects of HIV viremia on the gastrointestinal microbiome of young MSM.

Cook RR, Fulcher JA, Tobin NH, Li F, Lee D, Javanbakht M, Brookmeyer R, Shoptaw S, Bolan R, Aldrovandi GM, Gorbach PM.

AIDS. 2019 Apr 1;33(5):793-804. doi: 10.1097/QAD.0000000000002132.


Meta-analysis of effects of exclusive breastfeeding on infant gut microbiota across populations.

Ho NT, Li F, Lee-Sarwar KA, Tun HM, Brown BP, Pannaraj PS, Bender JM, Azad MB, Thompson AL, Weiss ST, Azcarate-Peril MA, Litonjua AA, Kozyrskyj AL, Jaspan HB, Aldrovandi GM, Kuhn L.

Nat Commun. 2018 Oct 9;9(1):4169. doi: 10.1038/s41467-018-06473-x.


Quantification of variation and the impact of biomass in targeted 16S rRNA gene sequencing studies.

Bender JM, Li F, Adisetiyo H, Lee D, Zabih S, Hung L, Wilkinson TA, Pannaraj PS, She RC, Bard JD, Tobin NH, Aldrovandi GM.

Microbiome. 2018 Sep 10;6(1):155. doi: 10.1186/s40168-018-0543-z.


Effects of Substance Use and Sex Practices on the Intestinal Microbiome During HIV-1 Infection.

Fulcher JA, Hussain SK, Cook R, Li F, Tobin NH, Ragsdale A, Shoptaw S, Gorbach PM, Aldrovandi GM.

J Infect Dis. 2018 Oct 5;218(10):1560-1570. doi: 10.1093/infdis/jiy349.


Shared and Distinct Features of Human Milk and Infant Stool Viromes.

Pannaraj PS, Ly M, Cerini C, Saavedra M, Aldrovandi GM, Saboory AA, Johnson KM, Pride DT.

Front Microbiol. 2018 Jun 1;9:1162. doi: 10.3389/fmicb.2018.01162. eCollection 2018.


Combination Antibiotics Improves Disease Activity and Alters Microbial Communities in Children With Ulcerative Colitis.

Kordy K, Romeo AC, Lee DJ, Li F, Zabih S, Saavedra M, Cunningham NJ, Tobin N, Aldrovandi GM.

J Pediatr Gastroenterol Nutr. 2018 Sep;67(3):e60-e63. doi: 10.1097/MPG.0000000000002034. No abstract available.


A Method for Targeted 16S Sequencing of Human Milk Samples.

Tobin NH, Woodward C, Zabih S, Lee DJ, Li F, Aldrovandi GM.

J Vis Exp. 2018 Mar 23;(133). doi: 10.3791/56974.


Deregulation of HDAC5 by Viral Interferon Regulatory Factor 3 Plays an Essential Role in Kaposi's Sarcoma-Associated Herpesvirus-Induced Lymphangiogenesis.

Lee HR, Li F, Choi UY, Yu HR, Aldrovandi GM, Feng P, Gao SJ, Hong YK, Jung JU.

MBio. 2018 Jan 16;9(1). pii: e02217-17. doi: 10.1128/mBio.02217-17.


The importance of the microbiome in pediatrics and pediatric infectious diseases.

Gaufin T, Tobin NH, Aldrovandi GM.

Curr Opin Pediatr. 2018 Feb;30(1):117-124. doi: 10.1097/MOP.0000000000000576. Review.


The Association of Fat and Lean Tissue With Whole Body and Spine Bone Mineral Density Is Modified by HIV Status and Sex in Children and Youth.

Jacobson DL, Lindsey JC, Coull BA, Mulligan K, Bhagwat P, Aldrovandi GM; Pediatric AIDS Clinical Trials Group P1045 Team.

Pediatr Infect Dis J. 2018 Jan;37(1):71-77. doi: 10.1097/INF.0000000000001715.


HIV birth testing and linkage to care for HIV-infected infants.

Jean-Philippe P, Spiegel H, Gnanashanmugam D, Fitzgibbon J, DʼSouza P, Crawford KW, Jayashankar L, Bacon MC, Essajee SM, Aldrovandi GM, Cotton M, Abrams EJ.

AIDS. 2017 Aug 24;31(13):1797-1807. doi: 10.1097/QAD.0000000000001561.


Association Between Breast Milk Bacterial Communities and Establishment and Development of the Infant Gut Microbiome.

Pannaraj PS, Li F, Cerini C, Bender JM, Yang S, Rollie A, Adisetiyo H, Zabih S, Lincez PJ, Bittinger K, Bailey A, Bushman FD, Sleasman JW, Aldrovandi GM.

JAMA Pediatr. 2017 Jul 1;171(7):647-654. doi: 10.1001/jamapediatrics.2017.0378.


Breast milk and in utero transmission of HIV-1 select for envelope variants with unique molecular signatures.

Nakamura KJ, Heath L, Sobrera ER, Wilkinson TA, Semrau K, Kankasa C, Tobin NH, Webb NE, Lee B, Thea DM, Kuhn L, Mullins JI, Aldrovandi GM.

Retrovirology. 2017 Jan 26;14(1):6. doi: 10.1186/s12977-017-0331-z.


Maternal HIV infection influences the microbiome of HIV-uninfected infants.

Bender JM, Li F, Martelly S, Byrt E, Rouzier V, Leo M, Tobin N, Pannaraj PS, Adisetiyo H, Rollie A, Santiskulvong C, Wang S, Autran C, Bode L, Fitzgerald D, Kuhn L, Aldrovandi GM.

Sci Transl Med. 2016 Jul 27;8(349):349ra100. doi: 10.1126/scitranslmed.aaf5103. Erratum in: Sci Transl Med. 2016 Aug 10;8(351):351er6.


Autophagic UVRAG Promotes UV-Induced Photolesion Repair by Activation of the CRL4(DDB2) E3 Ligase.

Yang Y, He S, Wang Q, Li F, Kwak MJ, Chen S, O'Connell D, Zhang T, Pirooz SD, Jeon YH, Chimge NO, Frenkel B, Choi Y, Aldrovandi GM, Oh BH, Yuan Z, Liang C.

Mol Cell. 2016 May 19;62(4):507-19. doi: 10.1016/j.molcel.2016.04.014.


Brief Report: Macrophage Activation in HIV-Infected Adolescent Males Contributes to Differential Bone Loss by Sex: Adolescent Trials Network Study 021.

Ruan A, Tobin NH, Mulligan K, Rollie A, Li F, Sleasman J, Aldrovandi GM.

J Acquir Immune Defic Syndr. 2016 Aug 1;72(4):372-5. doi: 10.1097/QAI.0000000000000953.


Investigation of a suspected nosocomial transmission of blaKPC3-mediated carbapenem-resistant Klebsiella pneumoniae by whole genome sequencing.

Yang S, Hemarajata P, Hindler J, Ward K, Adisetiyo H, Li F, Aldrovandi GM, Green NM, Russell D, Rubin Z, Humphries RM.

Diagn Microbiol Infect Dis. 2016 Apr;84(4):337-42. doi: 10.1016/j.diagmicrobio.2015.12.019. Epub 2015 Dec 29.


Influenza Vaccine is Protective Against Laboratory-confirmed Influenza in Obese Children.

Smit MA, Wang HL, Kim E, Barragan N, Aldrovandi GM, El Amin AN, Mascola L, Pannaraj PS.

Pediatr Infect Dis J. 2016 Apr;35(4):440-5. doi: 10.1097/INF.0000000000001029.


Breast Milk of HIV-Positive Mothers Has Potent and Species-Specific In Vivo HIV-Inhibitory Activity.

Wahl A, Baker C, Spagnuolo RA, Stamper LW, Fouda GG, Permar SR, Hinde K, Kuhn L, Bode L, Aldrovandi GM, Garcia JV.

J Virol. 2015 Nov;89(21):10868-78. doi: 10.1128/JVI.01702-15. Epub 2015 Aug 19.


A Conserved Glycan in the C2 Domain of HIV-1 Envelope Acts as a Molecular Switch to Control X4 Utilization by Clonal Variants with Identical V3 Loops.

Lombardi F, Nakamura KJ, Chen T, Sobrera ER, Tobin NH, Aldrovandi GM.

PLoS One. 2015 Jun 17;10(6):e0128116. doi: 10.1371/journal.pone.0128116. eCollection 2015.


Oligosaccharide composition of breast milk influences survival of uninfected children born to HIV-infected mothers in Lusaka, Zambia.

Kuhn L, Kim HY, Hsiao L, Nissan C, Kankasa C, Mwiya M, Thea DM, Aldrovandi GM, Bode L.

J Nutr. 2015 Jan;145(1):66-72. doi: 10.3945/jn.114.199794. Epub 2014 Nov 19.


Exploration of the Effect of Tobacco Smoking on Metabolic Measures in Young People Living with HIV.

Rubinstein ML, Harris DR, Rudy BJ, Kapogiannis BG, Aldrovandi GM, Mulligan K.

AIDS Res Treat. 2014;2014:740545. doi: 10.1155/2014/740545. Epub 2014 Jul 9.


School-located influenza vaccination decreases laboratory-confirmed influenza and improves school attendance.

Pannaraj PS, Wang HL, Rivas H, Wiryawan H, Smit M, Green N, Aldrovandi GM, El Amin AN, Mascola L.

Clin Infect Dis. 2014 Aug 1;59(3):325-32. doi: 10.1093/cid/ciu340. Epub 2014 May 14.


HLA-G 14 bp deletion/insertion polymorphism and mother-to-child transmission of HIV.

Segat L, Zupin L, Kim HY, Catamo E, Thea DM, Kankasa C, Aldrovandi GM, Kuhn L, Crovella S.

Tissue Antigens. 2014 Mar;83(3):161-7. doi: 10.1111/tan.12296.


Are infants unique in their ability to be "functionally cured" of HIV-1?

Tobin NH, Aldrovandi GM.

Curr HIV/AIDS Rep. 2014 Mar;11(1):1-10. doi: 10.1007/s11904-013-0189-1.


Psychrobacter immobilis septicemia in a boy with X-linked chronic granulomatous disease and fulminant hepatic failure.

Sriaroon P, Elizalde A, Perez EE, Leiding JW, Aldrovandi GM, Sleasman JW.

J Clin Immunol. 2014 Jan;34(1):39-41. doi: 10.1007/s10875-013-9961-7. Epub 2013 Nov 12.


Human milk galectin-3 binding protein and breast-feeding-associated HIV transmission.

Chan CS, Kim HY, Autran C, Kim JH, Sinkala M, Kankasa C, Mwiya M, Thea DM, Aldrovandi GM, Kuhn L, Bode L.

Pediatr Infect Dis J. 2013 Dec;32(12):e473-5. doi: 10.1097/INF.0b013e3182a6e0a8.


Immunology of pediatric HIV infection.

Tobin NH, Aldrovandi GM.

Immunol Rev. 2013 Jul;254(1):143-69. doi: 10.1111/imr.12074. Review.


HIV-1 concentrations in human breast milk before and after weaning.

Kuhn L, Kim HY, Walter J, Thea DM, Sinkala M, Mwiya M, Kankasa C, Decker D, Aldrovandi GM.

Sci Transl Med. 2013 Apr 17;5(181):181ra51. doi: 10.1126/scitranslmed.3005113. Erratum in: Sci Transl Med. 2013 Nov 27;5(213):213er10.


Coverage of primary mother-to-child HIV transmission isolates by second-generation broadly neutralizing antibodies.

Nakamura KJ, Cerini C, Sobrera ER, Heath L, Sinkala M, Kankasa C, Thea DM, Mullins JI, Kuhn L, Aldrovandi GM.

AIDS. 2013 Jan 28;27(3):337-46. doi: 10.1097/QAD.0b013e32835cadd6.


Dynamics of breast milk HIV-1 RNA with unilateral mastitis or abscess.

Semrau K, Kuhn L, Brooks DR, Cabral H, Sinkala M, Kankasa C, Thea DM, Aldrovandi GM.

J Acquir Immune Defic Syndr. 2013 Mar 1;62(3):348-55. doi: 10.1097/QAI.0b013e31827e64d4.


Human milk oligosaccharide concentration and risk of postnatal transmission of HIV through breastfeeding.

Bode L, Kuhn L, Kim HY, Hsiao L, Nissan C, Sinkala M, Kankasa C, Mwiya M, Thea DM, Aldrovandi GM.

Am J Clin Nutr. 2012 Oct;96(4):831-9. Epub 2012 Aug 15.


Milk matters: soluble Toll-like receptor 2 (sTLR2) in breast milk significantly inhibits HIV-1 infection and inflammation.

Henrick BM, Nag K, Yao XD, Drannik AG, Aldrovandi GM, Rosenthal KL.

PLoS One. 2012;7(7):e40138. doi: 10.1371/journal.pone.0040138. Epub 2012 Jul 6.


Brown adipose tissue and its relationship to bone structure in pediatric patients.

Ponrartana S, Aggabao PC, Hu HH, Aldrovandi GM, Wren TA, Gilsanz V.

J Clin Endocrinol Metab. 2012 Aug;97(8):2693-8. doi: 10.1210/jc.2012-1589. Epub 2012 May 16.


Low bone mass in behaviorally HIV-infected young men on antiretroviral therapy: Adolescent Trials Network Study 021B.

Mulligan K, Harris DR, Emmanuel P, Fielding RA, Worrell C, Kapogiannis BG, Monte D, Sleasman J, Wilson CM, Aldrovandi GM; ATN 021 Protocol team.

Clin Infect Dis. 2012 Aug;55(3):461-8. doi: 10.1093/cid/cis455. Epub 2012 May 9.


Virologic determinants of breast milk transmission of HIV-1.

Fiscus SA, Aldrovandi GM.

Adv Exp Med Biol. 2012;743:69-80. doi: 10.1007/978-1-4614-2251-8_5. Review. No abstract available.


Using cluster heat maps to investigate relationships between body composition and laboratory measurements in HIV-infected and HIV-uninfected children and young adults.

Lindsey JC, Jacobson DL, Li H, Houseman EA, Aldrovandi GM, Mulligan K.

J Acquir Immune Defic Syndr. 2012 Mar 1;59(3):325-8. doi: 10.1097/QAI.0b013e31823fdbec.


Immunomodulatory factors in cervicovaginal secretions from pregnant and non-pregnant women: a cross-sectional study.

Walter J, Fraga L, Orin MJ, Decker WD, Gipps T, Stek A, Aldrovandi GM.

BMC Infect Dis. 2011 Sep 30;11:263. doi: 10.1186/1471-2334-11-263.


Exclusive breastfeeding, maternal HIV disease, and the risk of clinical breast pathology in HIV-infected, breastfeeding women.

Semrau K, Kuhn L, Brooks DR, Cabral H, Sinkala M, Kankasa C, Thea DM, Aldrovandi GM.

Am J Obstet Gynecol. 2011 Oct;205(4):344.e1-8. doi: 10.1016/j.ajog.2011.06.021. Epub 2011 Jun 15.


2050: Ending the odyssey of the great white plague. Part of a series on Pediatric Pharmacology, guest edited by Gianvincenzo Zuccotti, Emilio Clementi, and Massimo Molteni.

Jassal MS, Aldrovandi GM.

Pharmacol Res. 2011 Sep;64(3):176-9. doi: 10.1016/j.phrs.2011.03.019. Epub 2011 Apr 20.


Early weaning increases diarrhea morbidity and mortality among uninfected children born to HIV-infected mothers in Zambia.

Fawzy A, Arpadi S, Kankasa C, Sinkala M, Mwiya M, Thea DM, Aldrovandi GM, Kuhn L.

J Infect Dis. 2011 May 1;203(9):1222-30. doi: 10.1093/infdis/jir019.


What infants and breasts can teach us about natural protection from HIV infection.

Aldrovandi GM, Kuhn L.

J Infect Dis. 2010 Nov 1;202 Suppl 3:S366-70. doi: 10.1086/655972. Review.


Bone disease in HIV infection: a practical review and recommendations for HIV care providers.

McComsey GA, Tebas P, Shane E, Yin MT, Overton ET, Huang JS, Aldrovandi GM, Cardoso SW, Santana JL, Brown TT.

Clin Infect Dis. 2010 Oct 15;51(8):937-46. doi: 10.1086/656412. Review.


Potential impact of new WHO criteria for antiretroviral treatment for prevention of mother-to- child HIV transmission.

Kuhn L, Aldrovandi GM, Sinkala M, Kankasa C, Mwiya M, Thea DM.

AIDS. 2010 Jun 1;24(9):1374-7.


Lactation-associated postpartum weight changes among HIV-infected women in Zambia.

Murnane PM, Arpadi SM, Sinkala M, Kankasa C, Mwiya M, Kasonde P, Thea DM, Aldrovandi GM, Kuhn L.

Int J Epidemiol. 2010 Oct;39(5):1299-310. doi: 10.1093/ije/dyq065. Epub 2010 May 19.


Restriction of HIV-1 genotypes in breast milk does not account for the population transmission genetic bottleneck that occurs following transmission.

Heath L, Conway S, Jones L, Semrau K, Nakamura K, Walter J, Decker WD, Hong J, Chen T, Heil M, Sinkala M, Kankasa C, Thea DM, Kuhn L, Mullins JI, Aldrovandi GM.

PLoS One. 2010 Apr 20;5(4):e10213. doi: 10.1371/journal.pone.0010213.


4E10-resistant HIV-1 isolated from four subjects with rare membrane-proximal external region polymorphisms.

Nakamura KJ, Gach JS, Jones L, Semrau K, Walter J, Bibollet-Ruche F, Decker JM, Heath L, Decker WD, Sinkala M, Kankasa C, Thea D, Mullins J, Kuhn L, Zwick MB, Aldrovandi GM.

PLoS One. 2010 Mar 23;5(3):e9786. doi: 10.1371/journal.pone.0009786.


Total body and spinal bone mineral density across Tanner stage in perinatally HIV-infected and uninfected children and youth in PACTG 1045.

Jacobson DL, Lindsey JC, Gordon CM, Moye J, Hardin DS, Mulligan K, Aldrovandi GM; Pediatric AIDS Clinical Trials Group P1045 team.

AIDS. 2010 Mar 13;24(5):687-96. doi: 10.1097/QAD.0b013e328336095d.


Elevations in mortality associated with weaning persist into the second year of life among uninfected children born to HIV-infected mothers.

Kuhn L, Sinkala M, Semrau K, Kankasa C, Kasonde P, Mwiya M, Hu CC, Tsai WY, Thea DM, Aldrovandi GM.

Clin Infect Dis. 2010 Feb 1;50(3):437-44. doi: 10.1086/649886.


HIV prevention is not enough: child survival in the context of prevention of mother to child HIV transmission.

Kuhn L, Sinkala M, Thea DM, Kankasa C, Aldrovandi GM.

J Int AIDS Soc. 2009 Dec 11;12:36. doi: 10.1186/1758-2652-12-36.

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