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Items: 1 to 50 of 75

1.

Characterization of a thaumarchaeal symbiont that drives incomplete nitrification in the tropical sponge Ianthella basta.

Moeller FU, Webster NS, Herbold CW, Behnam F, Domman D, Albertsen M, Mooshammer M, Markert S, Turaev D, Becher D, Rattei T, Schweder T, Richter A, Watzka M, Nielsen PH, Wagner M.

Environ Microbiol. 2019 Jul 4. doi: 10.1111/1462-2920.14732. [Epub ahead of print]

PMID:
31271506
2.

"Candidatus Accumulibacter delftensis": A clade IC novel polyphosphate-accumulating organism without denitrifying activity on nitrate.

Rubio-Rincón FJ, Weissbrodt DG, Lopez-Vazquez CM, Welles L, Abbas B, Albertsen M, Nielsen PH, van Loosdrecht MCM, Brdjanovic D.

Water Res. 2019 Sep 15;161:136-151. doi: 10.1016/j.watres.2019.03.053. Epub 2019 Jun 2.

3.

Drinking Water Microbiome Project: Is it Time?

Hull NM, Ling F, Pinto AJ, Albertsen M, Jang HG, Hong PY, Konstantinidis KT, LeChevallier M, Colwell RR, Liu WT.

Trends Microbiol. 2019 Aug;27(8):670-677. doi: 10.1016/j.tim.2019.03.011. Epub 2019 Apr 25. Review.

PMID:
31031092
4.

Wheat ms5 male-sterility is induced by recessive homoeologous A and D genome non-specific lipid transfer proteins.

Pallotta MA, Warner P, Kouidri A, Tucker EJ, Baes M, Suchecki R, Watson-Haigh N, Okada T, Garcia M, Sandhu A, Singh M, Wolters P, Albertsen MC, Cigan AM, Baumann U, Whitford R.

Plant J. 2019 Apr 22. doi: 10.1111/tpj.14350. [Epub ahead of print]

PMID:
31009129
5.

Re-evaluating the microbiology of the enhanced biological phosphorus removal process.

Nielsen PH, McIlroy SJ, Albertsen M, Nierychlo M.

Curr Opin Biotechnol. 2019 Jun;57:111-118. doi: 10.1016/j.copbio.2019.03.008. Epub 2019 Apr 5. Review.

6.

Effects of Rht-B1 and Ppd-D1 loci on pollinator traits in wheat.

Okada T, Jayasinghe JEARM, Eckermann P, Watson-Haigh NS, Warner P, Hendrikse Y, Baes M, Tucker EJ, Laga H, Kato K, Albertsen M, Wolters P, Fleury D, Baumann U, Whitford R.

Theor Appl Genet. 2019 Jul;132(7):1965-1979. doi: 10.1007/s00122-019-03329-w. Epub 2019 Mar 21.

PMID:
30899967
7.

Evaluation of Agronomic Performance of β-Carotene Elevated Sorghum in Confined Field Conditions.

Che P, Zhao ZY, Hinds M, Rinehart K, Glassman K, Albertsen M.

Methods Mol Biol. 2019;1931:209-220. doi: 10.1007/978-1-4939-9039-9_15.

PMID:
30652293
8.

Nutritionally Enhanced Sorghum for the Arid and Semiarid Tropical Areas of Africa.

Zhao ZY, Che P, Glassman K, Albertsen M.

Methods Mol Biol. 2019;1931:197-207. doi: 10.1007/978-1-4939-9039-9_14.

PMID:
30652292
10.

Genomic insights into Candidatus Amarolinea aalborgensis gen. nov., sp. nov., associated with settleability problems in wastewater treatment plants.

Andersen MH, McIlroy SJ, Nierychlo M, Nielsen PH, Albertsen M.

Syst Appl Microbiol. 2019 Jan;42(1):77-84. doi: 10.1016/j.syapm.2018.08.001. Epub 2018 Aug 16.

11.

Characterization of the First "Candidatus Nitrotoga" Isolate Reveals Metabolic Versatility and Separate Evolution of Widespread Nitrite-Oxidizing Bacteria.

Kitzinger K, Koch H, Lücker S, Sedlacek CJ, Herbold C, Schwarz J, Daebeler A, Mueller AJ, Lukumbuzya M, Romano S, Leisch N, Karst SM, Kirkegaard R, Albertsen M, Nielsen PH, Wagner M, Daims H.

MBio. 2018 Jul 10;9(4). pii: e01186-18. doi: 10.1128/mBio.01186-18.

12.

A B-cell-associated gene signature classification of diffuse large B-cell lymphoma by NanoString technology.

Michaelsen TY, Richter J, Brøndum RF, Klapper W, Johnsen HE, Albertsen M, Dybkær K, Bøgsted M.

Blood Adv. 2018 Jul 10;2(13):1542-1546. doi: 10.1182/bloodadvances.2018017988.

13.

Concurrent modifications in the three homeologs of Ms45 gene with CRISPR-Cas9 lead to rapid generation of male sterile bread wheat (Triticum aestivum L.).

Singh M, Kumar M, Albertsen MC, Young JK, Cigan AM.

Plant Mol Biol. 2018 Jul;97(4-5):371-383. doi: 10.1007/s11103-018-0749-2. Epub 2018 Jun 29.

PMID:
29959585
14.

Novel prosthecate bacteria from the candidate phylum Acetothermia.

Hao L, McIlroy SJ, Kirkegaard RH, Karst SM, Fernando WEY, Aslan H, Meyer RL, Albertsen M, Nielsen PH, Dueholm MS.

ISME J. 2018 Sep;12(9):2225-2237. doi: 10.1038/s41396-018-0187-9. Epub 2018 Jun 8.

15.

Genomic insights into the Agromyces-like symbiont of earthworms and its distribution among host species.

Lund MB, Mogensen MF, Marshall IPG, Albertsen M, Viana F, Schramm A.

FEMS Microbiol Ecol. 2018 Jun 1;94(6). doi: 10.1093/femsec/fiy068.

PMID:
29668923
16.

Cultivation and Genomic Analysis of "Candidatus Nitrosocaldus islandicus," an Obligately Thermophilic, Ammonia-Oxidizing Thaumarchaeon from a Hot Spring Biofilm in Graendalur Valley, Iceland.

Daebeler A, Herbold CW, Vierheilig J, Sedlacek CJ, Pjevac P, Albertsen M, Kirkegaard RH, de la Torre JR, Daims H, Wagner M.

Front Microbiol. 2018 Feb 14;9:193. doi: 10.3389/fmicb.2018.00193. eCollection 2018.

17.

Peatland Acidobacteria with a dissimilatory sulfur metabolism.

Hausmann B, Pelikan C, Herbold CW, Köstlbacher S, Albertsen M, Eichorst SA, Glavina Del Rio T, Huemer M, Nielsen PH, Rattei T, Stingl U, Tringe SG, Trojan D, Wentrup C, Woebken D, Pester M, Loy A.

ISME J. 2018 Jun;12(7):1729-1742. doi: 10.1038/s41396-018-0077-1. Epub 2018 Feb 23.

18.

Developing a flexible, high-efficiency Agrobacterium-mediated sorghum transformation system with broad application.

Che P, Anand A, Wu E, Sander JD, Simon MK, Zhu W, Sigmund AL, Zastrow-Hayes G, Miller M, Liu D, Lawit SJ, Zhao ZY, Albertsen MC, Jones TJ.

Plant Biotechnol J. 2018 Jul;16(7):1388-1395. doi: 10.1111/pbi.12879. Epub 2018 Feb 6.

19.

Retrieval of a million high-quality, full-length microbial 16S and 18S rRNA gene sequences without primer bias.

Karst SM, Dueholm MS, McIlroy SJ, Kirkegaard RH, Nielsen PH, Albertsen M.

Nat Biotechnol. 2018 Feb;36(2):190-195. doi: 10.1038/nbt.4045. Epub 2018 Jan 1.

PMID:
29291348
20.

In situ metabolomic- and transcriptomic-profiling of the host-associated cyanobacteria Prochloron and Acaryochloris marina.

Behrendt L, Raina JB, Lutz A, Kot W, Albertsen M, Halkjær-Nielsen P, Sørensen SJ, Larkum AW, Kühl M.

ISME J. 2017 Oct 31. doi: 10.1038/ismej.2017.192. [Epub ahead of print]

21.

Molecular identification of the wheat male fertility gene Ms1 and its prospects for hybrid breeding.

Tucker EJ, Baumann U, Kouidri A, Suchecki R, Baes M, Garcia M, Okada T, Dong C, Wu Y, Sandhu A, Singh M, Langridge P, Wolters P, Albertsen MC, Cigan AM, Whitford R.

Nat Commun. 2017 Oct 11;8(1):869. doi: 10.1038/s41467-017-00945-2.

22.

Kinetic analysis of a complete nitrifier reveals an oligotrophic lifestyle.

Kits KD, Sedlacek CJ, Lebedeva EV, Han P, Bulaev A, Pjevac P, Daebeler A, Romano S, Albertsen M, Stein LY, Daims H, Wagner M.

Nature. 2017 Sep 14;549(7671):269-272. doi: 10.1038/nature23679. Epub 2017 Aug 23.

23.

The impact of immigration on microbial community composition in full-scale anaerobic digesters.

Kirkegaard RH, McIlroy SJ, Kristensen JM, Nierychlo M, Karst SM, Dueholm MS, Albertsen M, Nielsen PH.

Sci Rep. 2017 Aug 24;7(1):9343. doi: 10.1038/s41598-017-09303-0.

24.

Culture-Independent Analyses Reveal Novel Anaerolineaceae as Abundant Primary Fermenters in Anaerobic Digesters Treating Waste Activated Sludge.

McIlroy SJ, Kirkegaard RH, Dueholm MS, Fernando E, Karst SM, Albertsen M, Nielsen PH.

Front Microbiol. 2017 Jun 23;8:1134. doi: 10.3389/fmicb.2017.01134. eCollection 2017.

25.

Crenothrix are major methane consumers in stratified lakes.

Oswald K, Graf JS, Littmann S, Tienken D, Brand A, Wehrli B, Albertsen M, Daims H, Wagner M, Kuypers MM, Schubert CJ, Milucka J.

ISME J. 2017 Sep;11(9):2124-2140. doi: 10.1038/ismej.2017.77. Epub 2017 Jun 6.

26.

A Critical Assessment of the Microorganisms Proposed to be Important to Enhanced Biological Phosphorus Removal in Full-Scale Wastewater Treatment Systems.

Stokholm-Bjerregaard M, McIlroy SJ, Nierychlo M, Karst SM, Albertsen M, Nielsen PH.

Front Microbiol. 2017 Apr 27;8:718. doi: 10.3389/fmicb.2017.00718. eCollection 2017.

27.

MiDAS 2.0: an ecosystem-specific taxonomy and online database for the organisms of wastewater treatment systems expanded for anaerobic digester groups.

McIlroy SJ, Kirkegaard RH, McIlroy B, Nierychlo M, Kristensen JM, Karst SM, Albertsen M, Nielsen PH.

Database (Oxford). 2017 Jan 1;2017(1). doi: 10.1093/database/bax016.

28.

Draft Genome Sequence of Desulfuromonas acetexigens Strain 2873, a Novel Anode-Respiring Bacterium.

Katuri KP, Albertsen M, Saikaly PE.

Genome Announc. 2017 Mar 2;5(9). pii: e01522-16. doi: 10.1128/genomeA.01522-16.

29.

Cultivation and characterization of Candidatus Nitrosocosmicus exaquare, an ammonia-oxidizing archaeon from a municipal wastewater treatment system.

Sauder LA, Albertsen M, Engel K, Schwarz J, Nielsen PH, Wagner M, Neufeld JD.

ISME J. 2017 May;11(5):1142-1157. doi: 10.1038/ismej.2016.192. Epub 2017 Feb 14.

30.

A single point mutation in Ms44 results in dominant male sterility and improves nitrogen use efficiency in maize.

Fox T, DeBruin J, Haug Collet K, Trimnell M, Clapp J, Leonard A, Li B, Scolaro E, Collinson S, Glassman K, Miller M, Schussler J, Dolan D, Liu L, Gho C, Albertsen M, Loussaert D, Shen B.

Plant Biotechnol J. 2017 Aug;15(8):942-952. doi: 10.1111/pbi.12689. Epub 2017 Feb 7.

31.

Elevated vitamin E content improves all-trans β-carotene accumulation and stability in biofortified sorghum.

Che P, Zhao ZY, Glassman K, Dolde D, Hu TX, Jones TJ, Gruis DF, Obukosia S, Wambugu F, Albertsen MC.

Proc Natl Acad Sci U S A. 2016 Sep 27;113(39):11040-5. doi: 10.1073/pnas.1605689113. Epub 2016 Sep 12. Erratum in: Proc Natl Acad Sci U S A. 2016 Nov 28;:.

32.

"Candidatus Propionivibrio aalborgensis": A Novel Glycogen Accumulating Organism Abundant in Full-Scale Enhanced Biological Phosphorus Removal Plants.

Albertsen M, McIlroy SJ, Stokholm-Bjerregaard M, Karst SM, Nielsen PH.

Front Microbiol. 2016 Jul 4;7:1033. doi: 10.3389/fmicb.2016.01033. eCollection 2016.

33.

Dynamics of the Fouling Layer Microbial Community in a Membrane Bioreactor.

Ziegler AS, McIlroy SJ, Larsen P, Albertsen M, Hansen AA, Heinen N, Nielsen PH.

PLoS One. 2016 Jul 11;11(7):e0158811. doi: 10.1371/journal.pone.0158811. eCollection 2016.

34.

Identification of syntrophic acetate-oxidizing bacteria in anaerobic digesters by combined protein-based stable isotope probing and metagenomics.

Mosbæk F, Kjeldal H, Mulat DG, Albertsen M, Ward AJ, Feilberg A, Nielsen JL.

ISME J. 2016 Oct;10(10):2405-18. doi: 10.1038/ismej.2016.39. Epub 2016 Apr 29.

35.

Phylogenetic diversity and ecophysiology of Candidate phylum Saccharibacteria in activated sludge.

Kindaichi T, Yamaoka S, Uehara R, Ozaki N, Ohashi A, Albertsen M, Nielsen PH, Nielsen JL.

FEMS Microbiol Ecol. 2016 Jun;92(6):fiw078. doi: 10.1093/femsec/fiw078. Epub 2016 Apr 17.

PMID:
27090759
36.

Genomic insights into members of the candidate phylum Hyd24-12 common in mesophilic anaerobic digesters.

Kirkegaard RH, Dueholm MS, McIlroy SJ, Nierychlo M, Karst SM, Albertsen M, Nielsen PH.

ISME J. 2016 Oct;10(10):2352-64. doi: 10.1038/ismej.2016.43. Epub 2016 Apr 8.

37.

Genomic and in situ investigations of the novel uncultured Chloroflexi associated with 0092 morphotype filamentous bulking in activated sludge.

McIlroy SJ, Karst SM, Nierychlo M, Dueholm MS, Albertsen M, Kirkegaard RH, Seviour RJ, Nielsen PH.

ISME J. 2016 Sep;10(9):2223-34. doi: 10.1038/ismej.2016.14. Epub 2016 Feb 23.

38.

Complete nitrification by a single microorganism.

van Kessel MA, Speth DR, Albertsen M, Nielsen PH, Op den Camp HJ, Kartal B, Jetten MS, Lücker S.

Nature. 2015 Dec 24;528(7583):555-9. doi: 10.1038/nature16459. Epub 2015 Nov 26.

39.

Complete nitrification by Nitrospira bacteria.

Daims H, Lebedeva EV, Pjevac P, Han P, Herbold C, Albertsen M, Jehmlich N, Palatinszky M, Vierheilig J, Bulaev A, Kirkegaard RH, von Bergen M, Rattei T, Bendinger B, Nielsen PH, Wagner M.

Nature. 2015 Dec 24;528(7583):504-9. doi: 10.1038/nature16461. Epub 2015 Nov 26.

40.

Development of a novel recessive genetic male sterility system for hybrid seed production in maize and other cross-pollinating crops.

Wu Y, Fox TW, Trimnell MR, Wang L, Xu RJ, Cigan AM, Huffman GA, Garnaat CW, Hershey H, Albertsen MC.

Plant Biotechnol J. 2016 Mar;14(3):1046-54. doi: 10.1111/pbi.12477. Epub 2015 Oct 6.

41.

Limited dissemination of the wastewater treatment plant core resistome.

Munck C, Albertsen M, Telke A, Ellabaan M, Nielsen PH, Sommer MOA.

Nat Commun. 2015 Sep 30;6:8452. doi: 10.1038/ncomms9452.

42.

Characterization of the In Situ Ecophysiology of Novel Phylotypes in Nutrient Removal Activated Sludge Treatment Plants.

McIlroy SJ, Awata T, Nierychlo M, Albertsen M, Kindaichi T, Nielsen PH.

PLoS One. 2015 Sep 4;10(9):e0136424. doi: 10.1371/journal.pone.0136424. eCollection 2015.

43.

Expanded metabolic versatility of ubiquitous nitrite-oxidizing bacteria from the genus Nitrospira.

Koch H, Lücker S, Albertsen M, Kitzinger K, Herbold C, Spieck E, Nielsen PH, Wagner M, Daims H.

Proc Natl Acad Sci U S A. 2015 Sep 8;112(36):11371-6. doi: 10.1073/pnas.1506533112. Epub 2015 Aug 24.

44.

The activated sludge ecosystem contains a core community of abundant organisms.

Saunders AM, Albertsen M, Vollertsen J, Nielsen PH.

ISME J. 2016 Jan;10(1):11-20. doi: 10.1038/ismej.2015.117. Epub 2015 Aug 11.

45.

Back to Basics--The Influence of DNA Extraction and Primer Choice on Phylogenetic Analysis of Activated Sludge Communities.

Albertsen M, Karst SM, Ziegler AS, Kirkegaard RH, Nielsen PH.

PLoS One. 2015 Jul 16;10(7):e0132783. doi: 10.1371/journal.pone.0132783. eCollection 2015.

46.

MiDAS: the field guide to the microbes of activated sludge.

McIlroy SJ, Saunders AM, Albertsen M, Nierychlo M, McIlroy B, Hansen AA, Karst SM, Nielsen JL, Nielsen PH.

Database (Oxford). 2015 Jun 27;2015:bav062. doi: 10.1093/database/bav062. Print 2015.

47.

Complete Genome Sequence of the Bacterium Aalborg_AAW-1, Representing a Novel Family within the Candidate Phylum SR1.

Dueholm MS, Albertsen M, Stokholm-Bjerregaard M, McIlroy SJ, Karst SM, Nielsen PH.

Genome Announc. 2015 Jun 11;3(3). pii: e00624-15. doi: 10.1128/genomeA.00624-15.

48.

Is there a place for nutrition-sensitive agriculture?

Wambugu F, Obukosia S, Gaffney J, Kamanga D, Che P, Albertsen MC, Zhao ZY, Ragland L, Yeye M, Kimani E, Aba D, Gidado R, Solomon BO, Njuguna M.

Proc Nutr Soc. 2015 Nov;74(4):441-8. doi: 10.1017/S0029665115000099. Epub 2015 Apr 8. Review.

PMID:
25851095
49.

Growth of nitrite-oxidizing bacteria by aerobic hydrogen oxidation.

Koch H, Galushko A, Albertsen M, Schintlmeister A, Gruber-Dorninger C, Lücker S, Pelletier E, Le Paslier D, Spieck E, Richter A, Nielsen PH, Wagner M, Daims H.

Science. 2014 Aug 29;345(6200):1052-4. doi: 10.1126/science.1256985.

50.

Complete Genome of Rhodococcus pyridinivorans SB3094, a Methyl-Ethyl-Ketone-Degrading Bacterium Used for Bioaugmentation.

Dueholm MS, Albertsen M, D'Imperio S, Tale VP, Lewis D, Nielsen PH, Nielsen JL.

Genome Announc. 2014 May 29;2(3). pii: e00525-14. doi: 10.1128/genomeA.00525-14.

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