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Items: 11


Single-cell trajectories reconstruction, exploration and mapping of omics data with STREAM.

Chen H, Albergante L, Hsu JY, Lareau CA, Lo Bosco G, Guan J, Zhou S, Gorban AN, Bauer DE, Aryee MJ, Langenau DM, Zinovyev A, Buenrostro JD, Yuan GC, Pinello L.

Nat Commun. 2019 Apr 23;10(1):1903. doi: 10.1038/s41467-019-09670-4.


Faster growth with shorter antigens can explain a VSG hierarchy during African trypanosome infections: a feint attack by parasites.

Liu D, Albergante L, Newman TJ, Horn D.

Sci Rep. 2018 Jul 19;8(1):10922. doi: 10.1038/s41598-018-29296-8.


Reply to Jiménez-Alonso et al., Schooling and Zhao, and Mortazavi: Further discussion on the immunological model of carcinogenesis.

Palmer S, Albergante L, Blackburn CC, Newman TJ.

Proc Natl Acad Sci U S A. 2018 May 8;115(19):E4319-E4321. doi: 10.1073/pnas.1802809115. Epub 2018 Apr 18. No abstract available.


Thymic involution and rising disease incidence with age.

Palmer S, Albergante L, Blackburn CC, Newman TJ.

Proc Natl Acad Sci U S A. 2018 Feb 20;115(8):1883-1888. doi: 10.1073/pnas.1714478115. Epub 2018 Feb 5.


Universal attenuators and their interactions with feedback loops in gene regulatory networks.

Liu D, Albergante L, Newman TJ.

Nucleic Acids Res. 2017 Jul 7;45(12):7078-7093. doi: 10.1093/nar/gkx485.


Inevitability and containment of replication errors for eukaryotic genome lengths spanning megabase to gigabase.

Al Mamun M, Albergante L, Moreno A, Carrington JT, Blow JJ, Newman TJ.

Proc Natl Acad Sci U S A. 2016 Sep 27;113(39):E5765-74. doi: 10.1073/pnas.1603241113. Epub 2016 Sep 14.


Unreplicated DNA remaining from unperturbed S phases passes through mitosis for resolution in daughter cells.

Moreno A, Carrington JT, Albergante L, Al Mamun M, Haagensen EJ, Komseli ES, Gorgoulis VG, Newman TJ, Blow JJ.

Proc Natl Acad Sci U S A. 2016 Sep 27;113(39):E5757-64. doi: 10.1073/pnas.1603252113. Epub 2016 Aug 11.


Insights into Biological Complexity from Simple Foundations.

Albergante L, Liu D, Palmer S, Newman TJ.

Adv Exp Med Biol. 2016;915:295-305. doi: 10.1007/978-3-319-32189-9_18. Review.


Buffered Qualitative Stability explains the robustness and evolvability of transcriptional networks.

Albergante L, Blow JJ, Newman TJ.

Elife. 2014 Sep 2;3:e02863. doi: 10.7554/eLife.02863.


Identification of 2R-ohnologue gene families displaying the same mutation-load skew in multiple cancers.

Tinti M, Dissanayake K, Synowsky S, Albergante L, MacKintosh C.

Open Biol. 2014 May 7;4:140029. doi: 10.1098/rsob.140029.


A Petri net model of granulomatous inflammation: implications for IL-10 mediated control of Leishmania donovani infection.

Albergante L, Timmis J, Beattie L, Kaye PM.

PLoS Comput Biol. 2013;9(11):e1003334. doi: 10.1371/journal.pcbi.1003334. Epub 2013 Nov 21.

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