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Items: 14

1.

AutoMLST: an automated web server for generating multi-locus species trees highlighting natural product potential.

Alanjary M, Steinke K, Ziemert N.

Nucleic Acids Res. 2019 Apr 18. pii: gkz282. doi: 10.1093/nar/gkz282. [Epub ahead of print]

PMID:
30997504
2.

Mining bacterial genomes to reveal secret synergy.

Alanjary M, Medema MH.

J Biol Chem. 2018 Dec 28;293(52):19996-19997. doi: 10.1074/jbc.H118.006669.

3.

Complete Genome Sequence of Streptomyces sp. Strain SHP22-7, a New Species Isolated from Mangrove of Enggano Island, Indonesia.

Handayani I, Ratnakomala S, Lisdiyanti P, Fahrurrozi, Kusharyoto W, Alanjary M, Ort-Winklbauer R, Kulik A, Wohlleben W, Mast Y.

Microbiol Resour Announc. 2018 Nov 21;7(20). pii: e01317-18. doi: 10.1128/MRA.01317-18. eCollection 2018 Nov.

4.

Analysis of the Genome and Metabolome of Marine Myxobacteria Reveals High Potential for Biosynthesis of Novel Specialized Metabolites.

Amiri Moghaddam J, Crüsemann M, Alanjary M, Harms H, Dávila-Céspedes A, Blom J, Poehlein A, Ziemert N, König GM, Schäberle TF.

Sci Rep. 2018 Nov 9;8(1):16600. doi: 10.1038/s41598-018-34954-y.

5.

Complete Genome Sequence of Streptomyces sp. Strain BSE7F, a Bali Mangrove Sediment Actinobacterium with Antimicrobial Activities.

Handayani I, Ratnakomala S, Lisdiyanti P, Fahrurrozi, Alanjary M, Wohlleben W, Mast Y.

Genome Announc. 2018 Jun 28;6(26). pii: e00618-18. doi: 10.1128/genomeA.00618-18.

6.

Assessing the Efficiency of Cultivation Techniques To Recover Natural Product Biosynthetic Gene Populations from Sediment.

Elfeki M, Alanjary M, Green SJ, Ziemert N, Murphy BT.

ACS Chem Biol. 2018 Aug 17;13(8):2074-2081. doi: 10.1021/acschembio.8b00254. Epub 2018 Jul 10.

PMID:
29932624
7.

Comparative genomics reveals phylogenetic distribution patterns of secondary metabolites in Amycolatopsis species.

Adamek M, Alanjary M, Sales-Ortells H, Goodfellow M, Bull AT, Winkler A, Wibberg D, Kalinowski J, Ziemert N.

BMC Genomics. 2018 Jun 1;19(1):426. doi: 10.1186/s12864-018-4809-4.

8.

Draft Genome Sequences of the Obligatory Marine Myxobacterial Strains Enhygromyxa salina SWB005 and SWB007.

Amiri Moghaddam J, Poehlein A, Fisch K, Alanjary M, Daniel R, König GM, Schäberle TF.

Genome Announc. 2018 Apr 26;6(17). pii: e00324-18. doi: 10.1128/genomeA.00324-18.

9.

Identification of a novel aminopolycarboxylic acid siderophore gene cluster encoding the biosynthesis of ethylenediaminesuccinic acid hydroxyarginine (EDHA).

Spohn M, Edenhart S, Alanjary M, Ziemert N, Wibberg D, Kalinowski J, Niedermeyer THJ, Stegmann E, Wohlleben W.

Metallomics. 2018 May 23;10(5):722-734. doi: 10.1039/c8mt00009c.

PMID:
29667664
10.

Function-related replacement of bacterial siderophore pathways.

Bruns H, Crüsemann M, Letzel AC, Alanjary M, McInerney JO, Jensen PR, Schulz S, Moore BS, Ziemert N.

ISME J. 2018 Feb;12(2):320-329. doi: 10.1038/ismej.2017.137. Epub 2017 Aug 15.

11.

The Antibiotic Resistant Target Seeker (ARTS), an exploration engine for antibiotic cluster prioritization and novel drug target discovery.

Alanjary M, Kronmiller B, Adamek M, Blin K, Weber T, Huson D, Philmus B, Ziemert N.

Nucleic Acids Res. 2017 Jul 3;45(W1):W42-W48. doi: 10.1093/nar/gkx360.

12.

Sequencing rare marine actinomycete genomes reveals high density of unique natural product biosynthetic gene clusters.

Schorn MA, Alanjary MM, Aguinaldo K, Korobeynikov A, Podell S, Patin N, Lincecum T, Jensen PR, Ziemert N, Moore BS.

Microbiology. 2016 Dec;162(12):2075-2086. doi: 10.1099/mic.0.000386. Epub 2016 Oct 27.

13.

The evolution of genome mining in microbes - a review.

Ziemert N, Alanjary M, Weber T.

Nat Prod Rep. 2016 Aug 27;33(8):988-1005. doi: 10.1039/c6np00025h. Epub 2016 Jun 8. Review.

PMID:
27272205
14.

An integrated semiconductor device enabling non-optical genome sequencing.

Rothberg JM, Hinz W, Rearick TM, Schultz J, Mileski W, Davey M, Leamon JH, Johnson K, Milgrew MJ, Edwards M, Hoon J, Simons JF, Marran D, Myers JW, Davidson JF, Branting A, Nobile JR, Puc BP, Light D, Clark TA, Huber M, Branciforte JT, Stoner IB, Cawley SE, Lyons M, Fu Y, Homer N, Sedova M, Miao X, Reed B, Sabina J, Feierstein E, Schorn M, Alanjary M, Dimalanta E, Dressman D, Kasinskas R, Sokolsky T, Fidanza JA, Namsaraev E, McKernan KJ, Williams A, Roth GT, Bustillo J.

Nature. 2011 Jul 20;475(7356):348-52. doi: 10.1038/nature10242.

PMID:
21776081

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