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Items: 38

1.

Use of high-throughput screening results to prioritize chemicals for potential adverse biological effects within a West Virginia watershed.

Rose LD, Akob DM, Tuberty SR, Corsi SR, DeCicco LA, Colby JD, Martin DJ.

Sci Total Environ. 2019 Aug 10;677:362-372. doi: 10.1016/j.scitotenv.2019.04.180. Epub 2019 Apr 19.

2.

Microbial Fe(II) oxidation by Sideroxydans lithotrophicus ES-1 in the presence of Schlöppnerbrunnen fen-derived humic acids.

Hädrich A, Taillefert M, Akob DM, Cooper RE, Litzba U, Wagner FE, Nietzsche S, Ciobota V, Rösch P, Popp J, Küsel K.

FEMS Microbiol Ecol. 2019 Apr 1;95(4). pii: fiz034. doi: 10.1093/femsec/fiz034.

PMID:
30874727
3.

Microbial community composition of a hydrocarbon reservoir 40 years after a CO2 enhanced oil recovery flood.

Shelton JL, Andrews RS, Akob DM, DeVera CA, Mumford A, McCray JE, McIntosh JC.

FEMS Microbiol Ecol. 2018 Oct 1;94(10). doi: 10.1093/femsec/fiy153.

4.

Acetylenotrophy: a hidden but ubiquitous microbial metabolism?

Akob DM, Sutton JM, Fierst JL, Haase KB, Baesman S, Luther GW 3rd, Miller LG, Oremland RS.

FEMS Microbiol Ecol. 2018 Aug 1;94(8). doi: 10.1093/femsec/fiy103. Review.

PMID:
29933435
5.

Common Hydraulic Fracturing Fluid Additives Alter the Structure and Function of Anaerobic Microbial Communities.

Mumford AC, Akob DM, Klinges JG, Cozzarelli IM.

Appl Environ Microbiol. 2018 Apr 2;84(8). pii: e02729-17. doi: 10.1128/AEM.02729-17. Print 2018 Apr 15.

6.

Degradation of Crude 4-MCHM (4-Methylcyclohexanemethanol) in Sediments from Elk River, West Virginia.

Cozzarelli IM, Akob DM, Baedecker MJ, Spencer T, Jaeschke J, Dunlap DS, Mumford AC, Poret-Peterson AT, Chambers DB.

Environ Sci Technol. 2017 Nov 7;51(21):12139-12145. doi: 10.1021/acs.est.7b03142. Epub 2017 Oct 13.

PMID:
28942635
7.

Archaeal Diversity and CO2 Fixers in Carbonate-/Siliciclastic-Rock Groundwater Ecosystems.

Lazar CS, Stoll W, Lehmann R, Herrmann M, Schwab VF, Akob DM, Nawaz A, Wubet T, Buscot F, Totsche KU, Küsel K.

Archaea. 2017 Jun 13;2017:2136287. doi: 10.1155/2017/2136287. eCollection 2017.

8.

Detection of Diazotrophy in the Acetylene-Fermenting Anaerobe Pelobacter sp. Strain SFB93.

Akob DM, Baesman SM, Sutton JM, Fierst JL, Mumford AC, Shrestha Y, Poret-Peterson AT, Bennett S, Dunlap DS, Haase KB, Oremland RS.

Appl Environ Microbiol. 2017 Aug 17;83(17). pii: e01198-17. doi: 10.1128/AEM.01198-17. Print 2017 Sep 1.

9.

Complete Genome Sequence of the Acetylene-Fermenting Pelobacter sp. Strain SFB93.

Sutton JM, Baesman SM, Fierst JL, Poret-Peterson AT, Oremland RS, Dunlap DS, Akob DM.

Genome Announc. 2017 Feb 9;5(6). pii: e01573-16. doi: 10.1128/genomeA.01573-16.

10.

Complete Genome Sequences of Two Acetylene-Fermenting Pelobacter acetylenicus Strains.

Sutton JM, Baesman SM, Fierst JL, Poret-Peterson AT, Oremland RS, Dunlap DS, Akob DM.

Genome Announc. 2017 Feb 9;5(6). pii: e01572-16. doi: 10.1128/genomeA.01572-16.

11.

Shifts in microbial community structure and function in surface waters impacted by unconventional oil and gas wastewater revealed by metagenomics.

Fahrenfeld NL, Delos Reyes H, Eramo A, Akob DM, Mumford AC, Cozzarelli IM.

Sci Total Environ. 2017 Feb 15;580:1205-1213. doi: 10.1016/j.scitotenv.2016.12.079. Epub 2016 Dec 27.

PMID:
28034542
12.

Environmental signatures and effects of an oil and gas wastewater spill in the Williston Basin, North Dakota.

Cozzarelli IM, Skalak KJ, Kent DB, Engle MA, Benthem A, Mumford AC, Haase K, Farag A, Harper D, Nagel SC, Iwanowicz LR, Orem WH, Akob DM, Jaeschke JB, Galloway J, Kohler M, Stoliker DL, Jolly GD.

Sci Total Environ. 2017 Feb 1;579:1781-1793. doi: 10.1016/j.scitotenv.2016.11.157. Epub 2016 Dec 8.

13.

Environmental Drivers of Differences in Microbial Community Structure in Crude Oil Reservoirs across a Methanogenic Gradient.

Shelton JL, Akob DM, McIntosh JC, Fierer N, Spear JR, Warwick PD, McCray JE.

Front Microbiol. 2016 Sep 28;7:1535. eCollection 2016.

14.

Wastewater Disposal from Unconventional Oil and Gas Development Degrades Stream Quality at a West Virginia Injection Facility.

Akob DM, Mumford AC, Orem W, Engle MA, Klinges JG, Kent DB, Cozzarelli IM.

Environ Sci Technol. 2016 Jun 7;50(11):5517-25. doi: 10.1021/acs.est.6b00428. Epub 2016 May 18.

15.

Endocrine disrupting activities of surface water associated with a West Virginia oil and gas industry wastewater disposal site.

Kassotis CD, Iwanowicz LR, Akob DM, Cozzarelli IM, Mumford AC, Orem WH, Nagel SC.

Sci Total Environ. 2016 Jul 1;557-558:901-10. doi: 10.1016/j.scitotenv.2016.03.113. Epub 2016 Apr 10.

PMID:
27073166
16.

Biological Low-pH Mn(II) Oxidation in a Manganese Deposit Influenced by Metal-Rich Groundwater.

Bohu T, Akob DM, Abratis M, Lazar CS, Küsel K.

Appl Environ Microbiol. 2016 May 2;82(10):3009-3021. doi: 10.1128/AEM.03844-15. Print 2016 May 15.

17.

Dominance of 'Gallionella capsiferriformans' and heavy metal association with Gallionella-like stalks in metal-rich pH 6 mine water discharge.

Fabisch M, Freyer G, Johnson CA, Büchel G, Akob DM, Neu TR, Küsel K.

Geobiology. 2016 Jan;14(1):68-90. doi: 10.1111/gbi.12162. Epub 2015 Sep 26.

PMID:
26407813
18.

Characterization of pH dependent Mn(II) oxidation strategies and formation of a bixbyite-like phase by Mesorhizobium australicum T-G1.

Bohu T, Santelli CM, Akob DM, Neu TR, Ciobota V, Rösch P, Popp J, Nietzsche S, Küsel K.

Front Microbiol. 2015 Jul 17;6:734. doi: 10.3389/fmicb.2015.00734. eCollection 2015.

19.

Large fractions of CO2-fixing microorganisms in pristine limestone aquifers appear to be involved in the oxidation of reduced sulfur and nitrogen compounds.

Herrmann M, Rusznyák A, Akob DM, Schulze I, Opitz S, Totsche KU, Küsel K.

Appl Environ Microbiol. 2015 Apr;81(7):2384-94. doi: 10.1128/AEM.03269-14. Epub 2015 Jan 23.

20.

Carbon flow from volcanic CO2 into soil microbial communities of a wetland mofette.

Beulig F, Heuer VB, Akob DM, Viehweger B, Elvert M, Herrmann M, Hinrichs KU, Küsel K.

ISME J. 2015 Mar;9(3):746-59. doi: 10.1038/ismej.2014.148. Epub 2014 Sep 12.

21.

Identification of Mn(II)-oxidizing bacteria from a low-pH contaminated former uranium mine.

Akob DM, Bohu T, Beyer A, Schäffner F, Händel M, Johnson CA, Merten D, Büchel G, Totsche KU, Küsel K.

Appl Environ Microbiol. 2014 Aug;80(16):5086-97. doi: 10.1128/AEM.01296-14. Epub 2014 Jun 13.

22.

Surprising abundance of Gallionella-related iron oxidizers in creek sediments at pH 4.4 or at high heavy metal concentrations.

Fabisch M, Beulig F, Akob DM, Küsel K.

Front Microbiol. 2013 Dec 18;4:390. doi: 10.3389/fmicb.2013.00390. eCollection 2013.

23.

Raman spectroscopy-an innovative and versatile tool to follow the respirational activity and carbonate biomineralization of important cave bacteria.

Keiner R, Frosch T, Hanf S, Rusznyak A, Akob DM, Küsel K, Popp J.

Anal Chem. 2013 Sep 17;85(18):8708-14. doi: 10.1021/ac401699d. Epub 2013 Aug 23.

PMID:
23972095
24.

Phagotrophic protist diversity in the groundwater of a karstified aquifer - morphological and molecular analysis.

Risse-Buhl U, Herrmann M, Lange P, Akob DM, Pizani N, Schönborn W, Totsche KU, Küsel K.

J Eukaryot Microbiol. 2013 Sep-Oct;60(5):467-79. doi: 10.1111/jeu.12054. Epub 2013 Jun 27.

PMID:
23808986
25.

The bacterial composition within the Sarracenia purpurea model system: local scale differences and the relationship with the other members of the food web.

Gray SM, Akob DM, Green SJ, Kostka JE.

PLoS One. 2012;7(12):e50969. doi: 10.1371/journal.pone.0050969. Epub 2012 Dec 5.

26.

Gene Expression Correlates with Process Rates Quantified for Sulfate- and Fe(III)-Reducing Bacteria in U(VI)-Contaminated Sediments.

Akob DM, Lee SH, Sheth M, Küsel K, Watson DB, Palumbo AV, Kostka JE, Chin KJ.

Front Microbiol. 2012 Aug 9;3:280. doi: 10.3389/fmicb.2012.00280. eCollection 2012.

27.

Calcite biomineralization by bacterial isolates from the recently discovered pristine karstic herrenberg cave.

Rusznyák A, Akob DM, Nietzsche S, Eusterhues K, Totsche KU, Neu TR, Frosch T, Popp J, Keiner R, Geletneky J, Katzschmann L, Schulze ED, Küsel K.

Appl Environ Microbiol. 2012 Feb;78(4):1157-67. doi: 10.1128/AEM.06568-11. Epub 2011 Dec 16.

28.

Linking specific heterotrophic bacterial populations to bioreduction of uranium and nitrate in contaminated subsurface sediments by using stable isotope probing.

Akob DM, Kerkhof L, Küsel K, Watson DB, Palumbo AV, Kostka JE.

Appl Environ Microbiol. 2011 Nov;77(22):8197-200. doi: 10.1128/AEM.05247-11. Epub 2011 Sep 23.

29.

Heavy metal tolerance of Fe(III)-reducing microbial communities in contaminated creek bank soils.

Burkhardt EM, Bischoff S, Akob DM, Büchel G, Küsel K.

Appl Environ Microbiol. 2011 May;77(9):3132-6. doi: 10.1128/AEM.02085-10. Epub 2011 Mar 4.

30.

Ecophysiology of Fe-cycling bacteria in acidic sediments.

Lu S, Gischkat S, Reiche M, Akob DM, Hallberg KB, Küsel K.

Appl Environ Microbiol. 2010 Dec;76(24):8174-83. doi: 10.1128/AEM.01931-10. Epub 2010 Oct 22.

31.

Microbial community changes in response to ethanol or methanol amendments for U(VI) reduction.

Vishnivetskaya TA, Brandt CC, Madden AS, Drake MM, Kostka JE, Akob DM, Küsel K, Palumbo AV.

Appl Environ Microbiol. 2010 Sep;76(17):5728-35. doi: 10.1128/AEM.00308-10. Epub 2010 Jul 2.

32.

Microbial links between sulfate reduction and metal retention in uranium- and heavy metal-contaminated soil.

Sitte J, Akob DM, Kaufmann C, Finster K, Banerjee D, Burkhardt EM, Kostka JE, Scheinost AC, Büchel G, Küsel K.

Appl Environ Microbiol. 2010 May;76(10):3143-52. doi: 10.1128/AEM.00051-10. Epub 2010 Apr 2.

33.

Denitrifying bacteria isolated from terrestrial subsurface sediments exposed to mixed-waste contamination.

Green SJ, Prakash O, Gihring TM, Akob DM, Jasrotia P, Jardine PM, Watson DB, Brown SD, Palumbo AV, Kostka JE.

Appl Environ Microbiol. 2010 May;76(10):3244-54. doi: 10.1128/AEM.03069-09. Epub 2010 Mar 19.

34.

Impact of biostimulated redox processes on metal dynamics in an iron-rich creek soil of a former uranium mining area.

Burkhardt EM, Akob DM, Bischoff S, Sitte J, Kostka JE, Banerjee D, Scheinost AC, Küsel K.

Environ Sci Technol. 2010 Jan 1;44(1):177-83. doi: 10.1021/es902038e.

PMID:
19938814
35.

Geobacter daltonii sp. nov., an Fe(III)- and uranium(VI)-reducing bacterium isolated from a shallow subsurface exposed to mixed heavy metal and hydrocarbon contamination.

Prakash O, Gihring TM, Dalton DD, Chin KJ, Green SJ, Akob DM, Wanger G, Kostka JE.

Int J Syst Evol Microbiol. 2010 Mar;60(Pt 3):546-53. doi: 10.1099/ijs.0.010843-0. Epub 2009 Aug 4.

PMID:
19654355
36.

Functional diversity and electron donor dependence of microbial populations capable of U(VI) reduction in radionuclide-contaminated subsurface sediments.

Akob DM, Mills HJ, Gihring TM, Kerkhof L, Stucki JW, Anastácio AS, Chin KJ, Küsel K, Palumbo AV, Watson DB, Kostka JE.

Appl Environ Microbiol. 2008 May;74(10):3159-70. doi: 10.1128/AEM.02881-07. Epub 2008 Mar 31.

37.

pH gradient-induced heterogeneity of Fe(III)-reducing microorganisms in coal mining-associated lake sediments.

Blöthe M, Akob DM, Kostka JE, Göschel K, Drake HL, Küsel K.

Appl Environ Microbiol. 2008 Feb;74(4):1019-29. Epub 2007 Dec 14. Erratum in: Appl Environ Microbiol. 2008 Nov,74(22):7100.

38.

Metabolically active microbial communities in uranium-contaminated subsurface sediments.

Akob DM, Mills HJ, Kostka JE.

FEMS Microbiol Ecol. 2007 Jan;59(1):95-107.

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