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Items: 1 to 50 of 197

1.

Photoinduced in Vivo Magnetic Resonance Imaging (MRI) with Rapid CO Release from an MnCO-Protein Needle Composite.

Hyodo F, Sho T, Maity B, Fujita K, Tachibana Y, Akashi S, Mano M, Hishikawa Y, Matsuo M, Ueno T.

Chemistry. 2018 Jun 15. doi: 10.1002/chem.201802445. [Epub ahead of print]

PMID:
29905382
2.

Methyl-selective isotope labeling using α-ketoisovalerate for the yeast Pichia pastoris recombinant protein expression system.

Suzuki R, Sakakura M, Mori M, Fujii M, Akashi S, Takahashi H.

J Biomol NMR. 2018 Jun 5. doi: 10.1007/s10858-018-0192-3. [Epub ahead of print]

PMID:
29869771
3.

Structural Diversity of Nucleosomes Characterized by Native Mass Spectrometry.

Saikusa K, Osakabe A, Kato D, Fuchigami S, Nagadoi A, Nishimura Y, Kurumizaka H, Akashi S.

Anal Chem. 2018 Jul 3;90(13):8217-8226. doi: 10.1021/acs.analchem.8b01649. Epub 2018 Jun 12.

PMID:
29860831
4.

The crystal structure and oligomeric form of Escherichia colil,d-carboxypeptidase A.

Meyer K, Addy C, Akashi S, Roper DI, Tame JRH.

Biochem Biophys Res Commun. 2018 May 15;499(3):594-599. doi: 10.1016/j.bbrc.2018.03.195. Epub 2018 Apr 5.

PMID:
29601819
5.

Structural analysis and taste evaluation of γ-glutamyl peptides comprising sulfur-containing amino acids.

Amino Y, Wakabayashi H, Akashi S, Ishiwatari Y.

Biosci Biotechnol Biochem. 2018 Mar;82(3):383-394. doi: 10.1080/09168451.2018.1436433.

PMID:
29488453
6.

Metabolic regulation of the CCN family genes by glycolysis in chondrocytes.

Akashi S, Nishida T, El-Seoudi A, Takigawa M, Iida S, Kubota S.

J Cell Commun Signal. 2018 Mar;12(1):245-252. doi: 10.1007/s12079-017-0420-8. Epub 2017 Nov 11.

7.

Malignant Pleural Mesothelioma with Marked Lymphatic Involvement: A Report of Two Autopsy Cases.

Ideguchi R, Ashizawa K, Akashi S, Shindo M, Minami K, Fukuda T, Irie J, Fukuda M, Uetani M.

Case Rep Oncol Med. 2017;2017:6195898. doi: 10.1155/2017/6195898. Epub 2017 May 29.

8.

Crystal structure of the overlapping dinucleosome composed of hexasome and octasome.

Kato D, Osakabe A, Arimura Y, Mizukami Y, Horikoshi N, Saikusa K, Akashi S, Nishimura Y, Park SY, Nogami J, Maehara K, Ohkawa Y, Matsumoto A, Kono H, Inoue R, Sugiyama M, Kurumizaka H.

Science. 2017 Apr 14;356(6334):205-208. doi: 10.1126/science.aak9867.

PMID:
28408607
9.

3D structural analysis of protein O-mannosyl kinase, POMK, a causative gene product of dystroglycanopathy.

Nagae M, Mishra SK, Neyazaki M, Oi R, Ikeda A, Matsugaki N, Akashi S, Manya H, Mizuno M, Yagi H, Kato K, Senda T, Endo T, Nogi T, Yamaguchi Y.

Genes Cells. 2017 Apr;22(4):348-359. doi: 10.1111/gtc.12480. Epub 2017 Mar 2.

10.

Digital volumetric measurement of mammographic density and the risk of overlooking cancer in Japanese women.

Sawada T, Akashi S, Nakamura S, Kuwayama T, Enokido K, Yoshida M, Hashimoto R, Ide T, Masuda H, Taruno K, Oyama H, Takamaru T, Kanada Y, Ikeda M, Kosugi N, Sato H, Nakayama S, Ata A, Tonouchi Y, Sakai H, Matsunaga Y, Matsutani A.

Breast Cancer. 2017 Sep;24(5):708-713. doi: 10.1007/s12282-017-0763-2. Epub 2017 Feb 25.

PMID:
28238177
11.

Retrospective survey of severe fever with thrombocytopenia syndrome in patients with suspected rickettsiosis in Japan.

Satoh M, Akashi S, Ogawa M, Wakeyama T, Ogawa H, Fukuma A, Taniguchi S, Tani H, Kurosu T, Fukushi S, Shimojima M, Ando S, Saijo M.

J Infect Chemother. 2017 Jan;23(1):45-50. doi: 10.1016/j.jiac.2016.09.011. Epub 2016 Oct 26.

PMID:
28122687
12.

Synthesis and Characterization of 8-Nitroguanosine 3',5'-Cyclic Monophosphorothioate Rp-Isomer as a Potent Inhibitor of Protein Kinase G1α.

Ahmed KA, Zhang T, Ono K, Tsutsuki H, Ida T, Akashi S, Miyata K, Oike Y, Akaike T, Sawa T.

Biol Pharm Bull. 2017 Mar 1;40(3):365-374. doi: 10.1248/bpb.b16-00880. Epub 2016 Dec 16.

13.

Protein polysulfidation-dependent persulfide dioxygenase activity of ethylmalonic encephalopathy protein 1.

Jung M, Kasamatsu S, Matsunaga T, Akashi S, Ono K, Nishimura A, Morita M, Abdul Hamid H, Fujii S, Kitamura H, Sawa T, Ida T, Motohashi H, Akaike T.

Biochem Biophys Res Commun. 2016 Nov 11;480(2):180-186. doi: 10.1016/j.bbrc.2016.10.022. Epub 2016 Oct 11.

PMID:
27742479
14.

Effect of charge on the conformation of highly basic peptides including the tail regions of histone proteins by ion mobility mass spectrometry.

Akashi S, Downard KM.

Anal Bioanal Chem. 2016 Sep;408(24):6637-48. doi: 10.1007/s00216-016-9777-4. Epub 2016 Jul 22.

PMID:
27447695
15.

Evolutionary trajectory of phytoalexin biosynthetic gene clusters in rice.

Miyamoto K, Fujita M, Shenton MR, Akashi S, Sugawara C, Sakai A, Horie K, Hasegawa M, Kawaide H, Mitsuhashi W, Nojiri H, Yamane H, Kurata N, Okada K, Toyomasu T.

Plant J. 2016 Aug;87(3):293-304. doi: 10.1111/tpj.13200. Epub 2016 Jul 8.

16.

Mucinous Balls Tangled With Mesothelial Cells and MUC2-Positive Cancer Cells in the Ascites of Pseudomyxoma Peritonei.

Akashi S, Kuwabara H, Yasuda E, Akutagawa H, Takeshita A, Kurisu Y, Egashira Y, Hirose Y, Yuki M, Tsuda Y, Hayashi M.

Diagn Cytopathol. 2016 Jul;44(7):628-31. doi: 10.1002/dc.23486. Epub 2016 Apr 15.

PMID:
27079739
17.

Combined Analysis of IFN-γ, IL-2, IL-5, IL-10, IL-1RA and MCP-1 in QFT Supernatant Is Useful for Distinguishing Active Tuberculosis from Latent Infection.

Suzukawa M, Akashi S, Nagai H, Nagase H, Nakamura H, Matsui H, Hebisawa A, Ohta K.

PLoS One. 2016 Apr 1;11(4):e0152483. doi: 10.1371/journal.pone.0152483. eCollection 2016.

18.

C-terminal acidic domain of histone chaperone human NAP1 is an efficient binding assistant for histone H2A-H2B, but not H3-H4.

Ohtomo H, Akashi S, Moriwaki Y, Okuwaki M, Osakabe A, Nagata K, Kurumizaka H, Nishimura Y.

Genes Cells. 2016 Mar;21(3):252-63. doi: 10.1111/gtc.12339. Epub 2016 Feb 4.

19.

Analysis of drug treatment outcome in clarithromycin-resistant Mycobacterium avium complex lung disease.

Kadota T, Matsui H, Hirose T, Suzuki J, Saito M, Akaba T, Kobayashi K, Akashi S, Kawashima M, Tamura A, Nagai H, Akagawa S, Kobayashi N, Ohta K.

BMC Infect Dis. 2016 Jan 27;16:31. doi: 10.1186/s12879-016-1384-7.

20.

Persistent Activation of cGMP-Dependent Protein Kinase by a Nitrated Cyclic Nucleotide via Site Specific Protein S-Guanylation.

Akashi S, Ahmed KA, Sawa T, Ono K, Tsutsuki H, Burgoyne JR, Ida T, Horio E, Prysyazhna O, Oike Y, Rahaman MM, Eaton P, Fujii S, Akaike T.

Biochemistry. 2016 Feb 9;55(5):751-61. doi: 10.1021/acs.biochem.5b00774. Epub 2016 Jan 29.

PMID:
26784639
21.

Comprehensive Characterization of Relationship Between Higher-Order Structure and FcRn Binding Affinity of Stress-Exposed Monoclonal Antibodies.

Tsuchida D, Yamazaki K, Akashi S.

Pharm Res. 2016 Apr;33(4):994-1002. doi: 10.1007/s11095-015-1845-5. Epub 2015 Dec 22.

PMID:
26694753
22.

Evaluation of Humoral Immunity to Mycobacterium tuberculosis-Specific Antigens for Correlation with Clinical Status and Effective Vaccine Development.

Niki M, Suzukawa M, Akashi S, Nagai H, Ohta K, Inoue M, Niki M, Kaneko Y, Morimoto K, Kurashima A, Kitada S, Matsumoto S, Suzuki K, Hoshino Y.

J Immunol Res. 2015;2015:527395. doi: 10.1155/2015/527395. Epub 2015 Oct 19.

23.

[Clinical Features of Hospitalized Cases due to Influenza Virus A Infection in the 2011/2012 Season].

Sato R, Ohshima N, Inoue E, Akashi S, Kawashima M, Nagai H.

Kansenshogaku Zasshi. 2015 May;89(3):382-7. Japanese.

PMID:
26552130
24.

Charge-neutralization effect of the tail regions on the histone H2A/H2B dimer structure.

Saikusa K, Shimoyama S, Asano Y, Nagadoi A, Sato M, Kurumizaka H, Nishimura Y, Akashi S.

Protein Sci. 2015 Aug;24(8):1224-31. doi: 10.1002/pro.2673. Epub 2015 Apr 3.

25.

Mass spectrometric approach for characterizing the disordered tail regions of the histone H2A/H2B dimer.

Saikusa K, Nagadoi A, Hara K, Fuchigami S, Kurumizaka H, Nishimura Y, Akashi S.

Anal Chem. 2015 Feb 17;87(4):2220-7. doi: 10.1021/ac503689w. Epub 2015 Jan 29.

PMID:
25594579
26.

Stability of the βB2B3 crystallin heterodimer to increased oxidation by radical probe and ion mobility mass spectrometry.

Akashi S, Maleknia SD, Saikusa K, Downard KM.

J Struct Biol. 2015 Jan;189(1):20-7. doi: 10.1016/j.jsb.2014.11.006. Epub 2014 Dec 3.

PMID:
25478970
27.

Characterization of stress-exposed granulocyte colony stimulating factor using ELISA and hydrogen/deuterium exchange mass spectrometry.

Tsuchida D, Yamazaki K, Akashi S.

J Am Soc Mass Spectrom. 2014 Oct;25(10):1747-54. doi: 10.1007/s13361-014-0959-z. Epub 2014 Jul 29.

PMID:
25070584
28.

The impact of a history of childhood nocturnal enuresis on adult nocturia and urgency.

Akashi S, Tomita K.

Acta Paediatr. 2014 Sep;103(9):e410-5. doi: 10.1111/apa.12694. Epub 2014 Aug 1.

PMID:
24834790
29.

The crystal structure of the active domain of Anopheles anti-platelet protein, a powerful anti-coagulant, in complex with an antibody.

Sugiyama K, Iyori M, Sawaguchi A, Akashi S, Tame JR, Park SY, Yoshida S.

J Biol Chem. 2014 Jun 6;289(23):16303-12. doi: 10.1074/jbc.M114.564526. Epub 2014 Apr 24.

30.

α-amylase crystalloid granuloma in the parotid gland.

Kuwabara H, Ishizaki S, Akashi S, Yuki M, Shibayama Y.

Diagn Cytopathol. 2015 Feb;43(2):114-6. doi: 10.1002/dc.23119. Epub 2014 Feb 19. No abstract available.

PMID:
24554643
31.

Endogenous nitrated nucleotide is a key mediator of autophagy and innate defense against bacteria.

Ito C, Saito Y, Nozawa T, Fujii S, Sawa T, Inoue H, Matsunaga T, Khan S, Akashi S, Hashimoto R, Aikawa C, Takahashi E, Sagara H, Komatsu M, Tanaka K, Akaike T, Nakagawa I, Arimoto H.

Mol Cell. 2013 Dec 26;52(6):794-804. doi: 10.1016/j.molcel.2013.10.024. Epub 2013 Nov 21.

32.

Sustained functional serotype-specific antibody after primary and secondary vaccinations with a pneumococcal polysaccharide vaccine in elderly patients with chronic lung disease.

Ohshima N, Nagai H, Matsui H, Akashi S, Makino T, Akeda Y, Oishi K.

Vaccine. 2014 Feb 26;32(10):1181-6. doi: 10.1016/j.vaccine.2013.09.060. Epub 2013 Oct 9.

PMID:
24120483
33.

Conclusive evidence of the reconstituted hexasome proven by native mass spectrometry.

Azegami N, Saikusa K, Todokoro Y, Nagadoi A, Kurumizaka H, Nishimura Y, Akashi S.

Biochemistry. 2013 Aug 6;52(31):5155-7. doi: 10.1021/bi4005655. Epub 2013 Jul 24.

PMID:
23879667
34.

Doctor's delay in endobronchial tuberculosis.

Tamura A, Higaki N, Kusaka K, Akashi S, Suzuki J, Shimada M, Suzuki J, Kawashima M, Suzuki J, Oshima N, Masuda K, Matsui H, Yamane A, Nagai H, Nagayama N, Toyota E, Akagawa S, Hebisawa A, Shoji S, Ohta K.

Kekkaku. 2013 Jan;88(1):9-13.

PMID:
23513562
35.

Gas-phase structure of the histone multimers characterized by ion mobility mass spectrometry and molecular dynamics simulation.

Saikusa K, Fuchigami S, Takahashi K, Asano Y, Nagadoi A, Tachiwana H, Kurumizaka H, Ikeguchi M, Nishimura Y, Akashi S.

Anal Chem. 2013 Apr 16;85(8):4165-71. doi: 10.1021/ac400395j. Epub 2013 Mar 29.

PMID:
23485128
36.

Characterisation of an intrinsically disordered protein complex of Swi5-Sfr1 by ion mobility mass spectrometry and small-angle X-ray scattering.

Saikusa K, Kuwabara N, Kokabu Y, Inoue Y, Sato M, Iwasaki H, Shimizu T, Ikeguchi M, Akashi S.

Analyst. 2013 Mar 7;138(5):1441-9. doi: 10.1039/c2an35878f.

PMID:
23324799
37.

Bicarbonate plays a critical role in the generation of cytotoxicity during SIN-1 decomposition in culture medium.

Shirai K, Okada T, Konishi K, Murata H, Akashi S, Sugawara F, Watanabe N, Arai T.

Oxid Med Cell Longev. 2012;2012:326731. doi: 10.1155/2012/326731. Epub 2012 Jul 9.

38.

Crystal structures of penicillin-binding protein 3 (PBP3) from methicillin-resistant Staphylococcus aureus in the apo and cefotaxime-bound forms.

Yoshida H, Kawai F, Obayashi E, Akashi S, Roper DI, Tame JR, Park SY.

J Mol Biol. 2012 Oct 26;423(3):351-64. doi: 10.1016/j.jmb.2012.07.012. Epub 2012 Jul 27.

PMID:
22846910
39.

Neoechinulin a imparts resistance to acute nitrosative stress in PC12 cells: a potential link of an elevated cellular reserve capacity for pyridine nucleotide redox turnover with cytoprotection.

Akashi S, Shirai K, Okada T, Konishi K, Takeuchi T, Kuramochi K, Takahashi M, Nakagawa T, Ogura Y, Fujieda S, Shibata Y, Sugawara F, Kobayashi S, Watanabe N, Arai T.

Biol Pharm Bull. 2012;35(7):1105-17.

40.

Function of homo- and hetero-oligomers of human nucleoplasmin/nucleophosmin family proteins NPM1, NPM2 and NPM3 during sperm chromatin remodeling.

Okuwaki M, Sumi A, Hisaoka M, Saotome-Nakamura A, Akashi S, Nishimura Y, Nagata K.

Nucleic Acids Res. 2012 Jun;40(11):4861-78. doi: 10.1093/nar/gks162. Epub 2012 Feb 22.

41.

Impact of limited oxidation on protein ion mobility and structure of importance to footprinting by radical probe mass spectrometry.

Downard KM, Maleknia SD, Akashi S.

Rapid Commun Mass Spectrom. 2012 Feb 15;26(3):226-30. doi: 10.1002/rcm.5320.

PMID:
22223306
42.

Fission yeast Swi5-Sfr1 protein complex, an activator of Rad51 recombinase, forms an extremely elongated dogleg-shaped structure.

Kokabu Y, Murayama Y, Kuwabara N, Oroguchi T, Hashimoto H, Tsutsui Y, Nozaki N, Akashi S, Unzai S, Shimizu T, Iwasaki H, Sato M, Ikeguchi M.

J Biol Chem. 2011 Dec 16;286(50):43569-76. doi: 10.1074/jbc.M111.303339. Epub 2011 Oct 27.

43.

Urinary 8-hydroxy-2'-deoxyguanosine as a novel biomarker for predicting cardiac events and evaluating the effectiveness of carvedilol treatment in patients with chronic systolic heart failure.

Susa T, Kobayashi S, Tanaka T, Murakami W, Akashi S, Kunitsugu I, Okuda S, Doi M, Wada Y, Nao T, Yamada J, Ueyama T, Okamura T, Yano M, Matsuzaki M.

Circ J. 2012;76(1):117-26. Epub 2011 Oct 19.

44.

Fine-needle aspiration cytology of triple-negative basal-like breast cancer.

Akashi S, Kuwabara H, Kurisu Y, Takahashi Y, Yasuda E, Takeshita A, Ishizaki S, Tsuji M, Shibayama Y.

Diagn Cytopathol. 2013 Apr;41(4):283-7. doi: 10.1002/dc.21807. Epub 2011 Oct 11.

PMID:
21987494
45.

[Japanese women surgeons' present and future: report of a survey on support environment and activities at facilities staffed with Japanese Surgical Society counselors].

Tomizawa Y, Kono E, Nomura S, Akashi S, Kawase K, Kanbayashi C, Yorozuya K.

Nihon Geka Gakkai Zasshi. 2011 Sep;112(5):349-53. Japanese. No abstract available.

PMID:
21941829
46.

Homology-modelled structure of the βB2B3-crystallin heterodimer studied by ion mobility and radical probe MS.

Downard KM, Kokabu Y, Ikeguchi M, Akashi S.

FEBS J. 2011 Nov;278(21):4044-54. doi: 10.1111/j.1742-4658.2011.08309.x. Epub 2011 Sep 15.

47.

Neoechinulin a impedes the progression of rotenone-induced cytotoxicity in PC12 cells.

Akashi S, Kimura T, Takeuchi T, Kuramochi K, Kobayashi S, Sugawara F, Watanabe N, Arai T.

Biol Pharm Bull. 2011;34(2):243-8.

48.

A clue to diagnosing connective tissue disease-associated interstitial lung disease.

Teramoto S, Komiya K, Akashi S, Kawashima M.

Chest. 2011 Mar;139(3):722. doi: 10.1378/chest.10-2381. No abstract available.

PMID:
21362663
49.

The mechanism of improvement of gas exchange by noninvasive ventilation (NIV) therapy for the post-operative state of liver cirrhosis patients.

Teramoto S, Akashi S, Kawashima M.

Intern Med. 2011;50(3):267; author reply 265-6. Epub 2011 Feb 1. No abstract available.

50.

Structural and biochemical analyses of the human PAD4 variant encoded by a functional haplotype gene.

Horikoshi N, Tachiwana H, Saito K, Osakabe A, Sato M, Yamada M, Akashi S, Nishimura Y, Kagawa W, Kurumizaka H.

Acta Crystallogr D Biol Crystallogr. 2011 Feb;67(Pt 2):112-8. doi: 10.1107/S0907444910051711. Epub 2011 Jan 8.

PMID:
21245532

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