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GLI1-amplifications expand the spectrum of soft tissue neoplasms defined by GLI1 gene fusions.

Agaram NP, Zhang L, Sung YS, Singer S, Stevens T, Prieto-Granada CN, Bishop JA, Wood BA, Swanson D, Dickson BC, Antonescu CR.

Mod Pathol. 2019 Jun 12. doi: 10.1038/s41379-019-0293-x. [Epub ahead of print]


Implementation of Digital Pathology Offers Clinical and Operational Increase in Efficiency and Cost Savings.

Hanna MG, Reuter VE, Samboy J, England C, Corsale L, Fine SW, Agaram NP, Stamelos E, Yagi Y, Hameed M, Klimstra DS, Sirintrapun SJ.

Arch Pathol Lab Med. 2019 Jun 11. doi: 10.5858/arpa.2018-0514-OA. [Epub ahead of print]


Chronic recurrent multifocal osteomyelitis-case report of two patients and review of literature.

Schwarzkopf E, Agaram NP, Ha S, Prince DE.

Int J Clin Rheumtol. 2019;14(1):24-30. doi: 10.4172/1758-4272.1000220.


Expanding the Spectrum of Intraosseous Rhabdomyosarcoma: Correlation Between 2 Distinct Gene Fusions and Phenotype.

Agaram NP, Zhang L, Sung YS, Cavalcanti MS, Torrence D, Wexler L, Francis G, Sommerville S, Swanson D, Dickson BC, Suurmeijer AJH, Williamson R, Antonescu CR.

Am J Surg Pathol. 2019 May;43(5):695-702. doi: 10.1097/PAS.0000000000001227.


Update on Myogenic Sarcomas.

Agaram NP.

Surg Pathol Clin. 2019 Mar;12(1):51-62. doi: 10.1016/j.path.2018.10.003. Epub 2018 Dec 20. Review.


Sorafenib for Advanced and Refractory Desmoid Tumors.

Gounder MM, Mahoney MR, Van Tine BA, Ravi V, Attia S, Deshpande HA, Gupta AA, Milhem MM, Conry RM, Movva S, Pishvaian MJ, Riedel RF, Sabagh T, Tap WD, Horvat N, Basch E, Schwartz LH, Maki RG, Agaram NP, Lefkowitz RA, Mazaheri Y, Yamashita R, Wright JJ, Dueck AC, Schwartz GK.

N Engl J Med. 2018 Dec 20;379(25):2417-2428. doi: 10.1056/NEJMoa1805052.


Expanding the Spectrum of Genetic Alterations in Pseudomyogenic Hemangioendothelioma With Recurrent Novel ACTB-FOSB Gene Fusions.

Agaram NP, Zhang L, Cotzia P, Antonescu CR.

Am J Surg Pathol. 2018 Dec;42(12):1653-1661. doi: 10.1097/PAS.0000000000001147.


Atypical Colonic Polyp.

Horvat N, Agaram NP, Gollub MJ.

Gastroenterology. 2019 Jan;156(1):31-33. doi: 10.1053/j.gastro.2018.08.047. Epub 2018 Sep 7. No abstract available.


MYOD1-mutant spindle cell and sclerosing rhabdomyosarcoma: an aggressive subtype irrespective of age. A reappraisal for molecular classification and risk stratification.

Agaram NP, LaQuaglia MP, Alaggio R, Zhang L, Fujisawa Y, Ladanyi M, Wexler LH, Antonescu CR.

Mod Pathol. 2019 Jan;32(1):27-36. doi: 10.1038/s41379-018-0120-9. Epub 2018 Sep 4.


Elevated β-hCG associated with aggressive Osteoblastoma.

Morris CD, Hameed MR, Agaram NP, Hwang S.

Skeletal Radiol. 2017 Sep;46(9):1187-1192. doi: 10.1007/s00256-017-2647-0. Epub 2017 Apr 10. Review.


Recurrent SRF-RELA Fusions Define a Novel Subset of Cellular Myofibroma/Myopericytoma: A Potential Diagnostic Pitfall With Sarcomas With Myogenic Differentiation.

Antonescu CR, Sung YS, Zhang L, Agaram NP, Fletcher CD.

Am J Surg Pathol. 2017 May;41(5):677-684. doi: 10.1097/PAS.0000000000000811.


Pathological characteristics of spine metastases treated with high-dose single-fraction stereotactic radiosurgery.

Katsoulakis E, Laufer I, Bilsky M, Agaram NP, Lovelock M, Yamada Y.

Neurosurg Focus. 2017 Jan;42(1):E7. doi: 10.3171/2016.10.FOCUS16368.


The molecular landscape of extraskeletal osteosarcoma: A clinicopathological and molecular biomarker study.

Jour G, Wang L, Middha S, Zehir A, Chen W, Sadowska J, Healey J, Agaram NP, Choi L, Nafa K, Hameed M.

J Pathol Clin Res. 2015 Oct 29;2(1):9-20. doi: 10.1002/cjp2.29. eCollection 2016 Jan.


BCOR Overexpression Is a Highly Sensitive Marker in Round Cell Sarcomas With BCOR Genetic Abnormalities.

Kao YC, Sung YS, Zhang L, Jungbluth AA, Huang SC, Argani P, Agaram NP, Zin A, Alaggio R, Antonescu CR.

Am J Surg Pathol. 2016 Dec;40(12):1670-1678.


Recurrent NTRK1 Gene Fusions Define a Novel Subset of Locally Aggressive Lipofibromatosis-like Neural Tumors.

Agaram NP, Zhang L, Sung YS, Chen CL, Chung CT, Antonescu CR, Fletcher CD.

Am J Surg Pathol. 2016 Oct;40(10):1407-16. doi: 10.1097/PAS.0000000000000675.


Secondary EWSR1 gene abnormalities in SMARCB1-deficient tumors with 22q11-12 regional deletions: Potential pitfalls in interpreting EWSR1 FISH results.

Huang SC, Zhang L, Sung YS, Chen CL, Kao YC, Agaram NP, Antonescu CR.

Genes Chromosomes Cancer. 2016 Oct;55(10):767-76. doi: 10.1002/gcc.22376. Epub 2016 Jun 24.


Recurrent BCOR Internal Tandem Duplication and YWHAE-NUTM2B Fusions in Soft Tissue Undifferentiated Round Cell Sarcoma of Infancy: Overlapping Genetic Features With Clear Cell Sarcoma of Kidney.

Kao YC, Sung YS, Zhang L, Huang SC, Argani P, Chung CT, Graf NS, Wright DC, Kellie SJ, Agaram NP, Ludwig K, Zin A, Alaggio R, Antonescu CR.

Am J Surg Pathol. 2016 Aug;40(8):1009-20. doi: 10.1097/PAS.0000000000000629.


Frequent HRAS Mutations in Malignant Ectomesenchymoma: Overlapping Genetic Abnormalities With Embryonal Rhabdomyosarcoma.

Huang SC, Alaggio R, Sung YS, Chen CL, Zhang L, Kao YC, Agaram NP, Wexler LH, Antonescu CR.

Am J Surg Pathol. 2016 Jul;40(7):876-85. doi: 10.1097/PAS.0000000000000612.


Optimal Percent Myxoid Component to Predict Outcome in High-Grade Myxofibrosarcoma and Undifferentiated Pleomorphic Sarcoma.

Lee AY, Agaram NP, Qin LX, Kuk D, Curtin C, Brennan MF, Singer S.

Ann Surg Oncol. 2016 Mar;23(3):818-25. doi: 10.1245/s10434-015-5063-5. Epub 2016 Jan 12.


Recurrent CIC Gene Abnormalities in Angiosarcomas: A Molecular Study of 120 Cases With Concurrent Investigation of PLCG1, KDR, MYC, and FLT4 Gene Alterations.

Huang SC, Zhang L, Sung YS, Chen CL, Kao YC, Agaram NP, Singer S, Tap WD, D'Angelo S, Antonescu CR.

Am J Surg Pathol. 2016 May;40(5):645-55. doi: 10.1097/PAS.0000000000000582.


Targeted exome sequencing profiles genetic alterations in leiomyosarcoma.

Agaram NP, Zhang L, LeLoarer F, Silk T, Sung YS, Scott SN, Kuk D, Qin LX, Berger MF, Antonescu CR, Singer S.

Genes Chromosomes Cancer. 2016 Feb;55(2):124-30. doi: 10.1002/gcc.22318. Epub 2015 Nov 6.


A Molecular Study of Pediatric Spindle and Sclerosing Rhabdomyosarcoma: Identification of Novel and Recurrent VGLL2-related Fusions in Infantile Cases.

Alaggio R, Zhang L, Sung YS, Huang SC, Chen CL, Bisogno G, Zin A, Agaram NP, LaQuaglia MP, Wexler LH, Antonescu CR.

Am J Surg Pathol. 2016 Feb;40(2):224-35. doi: 10.1097/PAS.0000000000000538.


Frequent FOS Gene Rearrangements in Epithelioid Hemangioma: A Molecular Study of 58 Cases With Morphologic Reappraisal.

Huang SC, Zhang L, Sung YS, Chen CL, Krausz T, Dickson BC, Kao YC, Agaram NP, Fletcher CD, Antonescu CR.

Am J Surg Pathol. 2015 Oct;39(10):1313-21. doi: 10.1097/PAS.0000000000000469.


Histology-based Classification Predicts Pattern of Recurrence and Improves Risk Stratification in Primary Retroperitoneal Sarcoma.

Tan MC, Brennan MF, Kuk D, Agaram NP, Antonescu CR, Qin LX, Moraco N, Crago AM, Singer S.

Ann Surg. 2016 Mar;263(3):593-600. doi: 10.1097/SLA.0000000000001149.


Novel FUS-KLF17 and EWSR1-KLF17 fusions in myoepithelial tumors.

Huang SC, Chen HW, Zhang L, Sung YS, Agaram NP, Davis M, Edelman M, Fletcher CD, Antonescu CR.

Genes Chromosomes Cancer. 2015 May;54(5):267-75. doi: 10.1002/gcc.22240. Epub 2015 Feb 23.


Dichotomy of Genetic Abnormalities in PEComas With Therapeutic Implications.

Agaram NP, Sung YS, Zhang L, Chen CL, Chen HW, Singer S, Dickson MA, Berger MF, Antonescu CR.

Am J Surg Pathol. 2015 Jun;39(6):813-25. doi: 10.1097/PAS.0000000000000389.


Prevalence of tumor-infiltrating lymphocytes and PD-L1 expression in the soft tissue sarcoma microenvironment.

D'Angelo SP, Shoushtari AN, Agaram NP, Kuk D, Qin LX, Carvajal RD, Dickson MA, Gounder M, Keohan ML, Schwartz GK, Tap WD.

Hum Pathol. 2015 Mar;46(3):357-65. doi: 10.1016/j.humpath.2014.11.001. Epub 2014 Nov 15.


EWSR1-PBX3: a novel gene fusion in myoepithelial tumors.

Agaram NP, Chen HW, Zhang L, Sung YS, Panicek D, Healey JH, Nielsen GP, Fletcher CD, Antonescu CR.

Genes Chromosomes Cancer. 2015 Feb;54(2):63-71. doi: 10.1002/gcc.22216. Epub 2014 Sep 18.


A genetic dichotomy between pure sclerosing epithelioid fibrosarcoma (SEF) and hybrid SEF/low-grade fibromyxoid sarcoma: a pathologic and molecular study of 18 cases.

Prieto-Granada C, Zhang L, Chen HW, Sung YS, Agaram NP, Jungbluth AA, Antonescu CR.

Genes Chromosomes Cancer. 2015 Jan;54(1):28-38. doi: 10.1002/gcc.22215. Epub 2014 Sep 18.


ZFP36-FOSB fusion defines a subset of epithelioid hemangioma with atypical features.

Antonescu CR, Chen HW, Zhang L, Sung YS, Panicek D, Agaram NP, Dickson BC, Krausz T, Fletcher CD.

Genes Chromosomes Cancer. 2014 Nov;53(11):951-9. doi: 10.1002/gcc.22206. Epub 2014 Jul 18.


Recurrent MYOD1 mutations in pediatric and adult sclerosing and spindle cell rhabdomyosarcomas: evidence for a common pathogenesis.

Agaram NP, Chen CL, Zhang L, LaQuaglia MP, Wexler L, Antonescu CR.

Genes Chromosomes Cancer. 2014 Sep;53(9):779-87. doi: 10.1002/gcc.22187. Epub 2014 May 14.


Extraskeletal myxoid chondrosarcoma with non-EWSR1-NR4A3 variant fusions correlate with rhabdoid phenotype and high-grade morphology.

Agaram NP, Zhang L, Sung YS, Singer S, Antonescu CR.

Hum Pathol. 2014 May;45(5):1084-91. doi: 10.1016/j.humpath.2014.01.007. Epub 2014 Jan 28.


USP6 gene rearrangements occur preferentially in giant cell reparative granulomas of the hands and feet but not in gnathic location.

Agaram NP, LeLoarer FV, Zhang L, Hwang S, Athanasian EA, Hameed M, Antonescu CR.

Hum Pathol. 2014 Jun;45(6):1147-52. doi: 10.1016/j.humpath.2014.01.020. Epub 2014 Feb 6.


Adenocarcinoma of the minor duodenal papilla and its precursor lesions: a clinical and pathologic study.

Shia J, Agaram NP, Olgac S, Cobanov B, Adsay V, Klimstra DS.

Am J Surg Pathol. 2014 Apr;38(4):526-33. doi: 10.1097/PAS.0000000000000123.


Novel ZC3H7B-BCOR, MEAF6-PHF1, and EPC1-PHF1 fusions in ossifying fibromyxoid tumors--molecular characterization shows genetic overlap with endometrial stromal sarcoma.

Antonescu CR, Sung YS, Chen CL, Zhang L, Chen HW, Singer S, Agaram NP, Sboner A, Fletcher CD.

Genes Chromosomes Cancer. 2014 Feb;53(2):183-93. doi: 10.1002/gcc.22132. Epub 2013 Nov 28.


Induction of sarcomas by mutant IDH2.

Lu C, Venneti S, Akalin A, Fang F, Ward PS, Dematteo RG, Intlekofer AM, Chen C, Ye J, Hameed M, Nafa K, Agaram NP, Cross JR, Khanin R, Mason CE, Healey JH, Lowe SW, Schwartz GK, Melnick A, Thompson CB.

Genes Dev. 2013 Sep 15;27(18):1986-98. doi: 10.1101/gad.226753.113.


Novel MIR143-NOTCH fusions in benign and malignant glomus tumors.

Mosquera JM, Sboner A, Zhang L, Chen CL, Sung YS, Chen HW, Agaram NP, Briskin D, Basha BM, Singer S, Rubin MA, Tuschl T, Antonescu CR.

Genes Chromosomes Cancer. 2013 Nov;52(11):1075-87. doi: 10.1002/gcc.22102. Epub 2013 Sep 2.


Recurrent skeletal extra-axial chordoma confirmed with brachyury: imaging features and review of the literature.

Lantos JE, Agaram NP, Healey JH, Hwang S.

Skeletal Radiol. 2013 Oct;42(10):1451-9. doi: 10.1007/s00256-013-1615-6. Epub 2013 May 9. Review.


Predictors of survival and recurrence in primary leiomyosarcoma.

Gladdy RA, Qin LX, Moraco N, Agaram NP, Brennan MF, Singer S.

Ann Surg Oncol. 2013 Jun;20(6):1851-7. doi: 10.1245/s10434-013-2876-y. Epub 2013 Jan 25.


Myxofibrosarcoma: prevalence and diagnostic value of the "tail sign" on magnetic resonance imaging.

Lefkowitz RA, Landa J, Hwang S, Zabor EC, Moskowitz CS, Agaram NP, Panicek DM.

Skeletal Radiol. 2013 Jun;42(6):809-18. doi: 10.1007/s00256-012-1563-6. Epub 2013 Jan 15.


Diffusion-weighted imaging in characterization of cystic pancreatic lesions.

Sandrasegaran K, Akisik FM, Patel AA, Rydberg M, Cramer HM, Agaram NP, Schmidt CM.

Clin Radiol. 2011 Sep;66(9):808-14. doi: 10.1016/j.crad.2011.01.016. Epub 2011 May 20. Erratum in: Clin Radiol. 2013 Jan;68(1):106.


Transforming growth factor α levels in pancreatic fluid.

Doyle CJ, Agaram NP, Yip-Schneider MT, Schmidt CM.

Pancreas. 2011 Mar;40(2):260-4.


A 61-year-old woman with osteomalacia and a thoracic spine lesion.

Marshall AE, Martin SE, Agaram NP, Chen JH, Horn EM, Douglas-Akinwande AC, Hattab EM.

Brain Pathol. 2010 Mar;20(2):499-502. doi: 10.1111/j.1750-3639.2009.00360.x.


DNA mismatch repair deficiency in ampullary carcinoma: a morphologic and immunohistochemical study of 54 cases.

Agaram NP, Shia J, Tang LH, Klimstra DS.

Am J Clin Pathol. 2010 May;133(5):772-80. doi: 10.1309/AJCPGDDE8PLLDRCC.


Mechanisms of sunitinib resistance in gastrointestinal stromal tumors harboring KITAY502-3ins mutation: an in vitro mutagenesis screen for drug resistance.

Guo T, Hajdu M, Agaram NP, Shinoda H, Veach D, Clarkson BD, Maki RG, Singer S, Dematteo RP, Besmer P, Antonescu CR.

Clin Cancer Res. 2009 Nov 15;15(22):6862-70. doi: 10.1158/1078-0432.CCR-09-1315. Epub 2009 Oct 27.


Solid pseudopapillary neoplasms of the pancreas: a multi-institutional study of 21 patients.

Matos JM, Grützmann R, Agaram NP, Saeger HD, Kumar HR, Lillemoe KD, Schmidt CM.

J Surg Res. 2009 Nov;157(1):e137-42. doi: 10.1016/j.jss.2009.03.091. Epub 2009 May 8. Erratum in: J Surg Res. 2010 Nov;164(1):74.


KDR activating mutations in human angiosarcomas are sensitive to specific kinase inhibitors.

Antonescu CR, Yoshida A, Guo T, Chang NE, Zhang L, Agaram NP, Qin LX, Brennan MF, Singer S, Maki RG.

Cancer Res. 2009 Sep 15;69(18):7175-9. doi: 10.1158/0008-5472.CAN-09-2068. Epub 2009 Sep 1.


Pancreatic acinar cell carcinoma: a multi-institutional study.

Matos JM, Schmidt CM, Turrini O, Agaram NP, Niedergethmann M, Saeger HD, Merchant N, Johnson CS, Lillemoe KD, Grützmann R.

J Gastrointest Surg. 2009 Aug;13(8):1495-502. doi: 10.1007/s11605-009-0938-z. Epub 2009 Jun 3.


Chordoma and chondrosarcoma gene profile: implications for immunotherapy.

Schwab JH, Boland PJ, Agaram NP, Socci ND, Guo T, O'Toole GC, Wang X, Ostroumov E, Hunter CJ, Block JA, Doty S, Ferrone S, Healey JH, Antonescu CR.

Cancer Immunol Immunother. 2009 Mar;58(3):339-49. doi: 10.1007/s00262-008-0557-7. Epub 2008 Jul 19.

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