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Items: 1 to 50 of 52

1.

Engineering enhanced cellobiohydrolase activity.

Taylor LE 2nd, Knott BC, Baker JO, Alahuhta PM, Hobdey SE, Linger JG, Lunin VV, Amore A, Subramanian V, Podkaminer K, Xu Q, VanderWall TA, Schuster LA, Chaudhari YB, Adney WS, Crowley MF, Himmel ME, Decker SR, Beckham GT.

Nat Commun. 2018 Mar 22;9(1):1186. doi: 10.1038/s41467-018-03501-8.

2.

Heterologous protein expression in Hypocrea jecorina: a historical perspective and new developments.

Singh A, Taylor LE 2nd, Vander Wall TA, Linger J, Himmel ME, Podkaminer K, Adney WS, Decker SR.

Biotechnol Adv. 2015 Jan-Feb;33(1):142-154. doi: 10.1016/j.biotechadv.2014.11.009. Epub 2014 Dec 3. Review.

PMID:
25479282
3.

Structure of Acidothermus cellulolyticus family 74 glycoside hydrolase at 1.82 Å resolution.

Alahuhta M, Adney WS, Himmel ME, Lunin VV.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2013 Dec;69(Pt 12):1335-8. doi: 10.1107/S1744309113030005. Epub 2013 Nov 28.

4.

Impact of alg3 gene deletion on growth, development, pigment production, protein secretion, and functions of recombinant Trichoderma reesei cellobiohydrolases in Aspergillus niger.

Dai Z, Aryal UK, Shukla A, Qian WJ, Smith RD, Magnuson JK, Adney WS, Beckham GT, Brunecky R, Himmel ME, Decker SR, Ju X, Zhang X, Baker SE.

Fungal Genet Biol. 2013 Dec;61:120-32. doi: 10.1016/j.fgb.2013.09.004. Epub 2013 Sep 25.

PMID:
24076077
5.

Assessing the protein concentration in commercial enzyme preparations.

Adney WS, Dowe N, Jennings EW, Mohagheghi A, Yarbrough J, McMillan JD.

Methods Mol Biol. 2012;908:169-80. doi: 10.1007/978-1-61779-956-3_16.

PMID:
22843399
6.

The metagenome of an anaerobic microbial community decomposing poplar wood chips.

van der Lelie D, Taghavi S, McCorkle SM, Li LL, Malfatti SA, Monteleone D, Donohoe BS, Ding SY, Adney WS, Himmel ME, Tringe SG.

PLoS One. 2012;7(5):e36740. doi: 10.1371/journal.pone.0036740. Epub 2012 May 21.

7.

Harnessing glycosylation to improve cellulase activity.

Beckham GT, Dai Z, Matthews JF, Momany M, Payne CM, Adney WS, Baker SE, Himmel ME.

Curr Opin Biotechnol. 2012 Jun;23(3):338-45. doi: 10.1016/j.copbio.2011.11.030. Epub 2011 Dec 18. Review.

PMID:
22186222
8.

Computational investigation of glycosylation effects on a family 1 carbohydrate-binding module.

Taylor CB, Talib MF, McCabe C, Bu L, Adney WS, Himmel ME, Crowley MF, Beckham GT.

J Biol Chem. 2012 Jan 27;287(5):3147-55. doi: 10.1074/jbc.M111.270389. Epub 2011 Dec 6.

9.

Bioprospecting metagenomics of decaying wood: mining for new glycoside hydrolases.

Li LL, Taghavi S, McCorkle SM, Zhang YB, Blewitt MG, Brunecky R, Adney WS, Himmel ME, Brumm P, Drinkwater C, Mead DA, Tringe SG, Lelie Dv.

Biotechnol Biofuels. 2011 Aug 4;4(1):23. doi: 10.1186/1754-6834-4-23.

10.

Probing carbohydrate product expulsion from a processive cellulase with multiple absolute binding free energy methods.

Bu L, Beckham GT, Shirts MR, Nimlos MR, Adney WS, Himmel ME, Crowley MF.

J Biol Chem. 2011 May 20;286(20):18161-9. doi: 10.1074/jbc.M110.212076. Epub 2011 Mar 24.

11.

The O-glycosylated linker from the Trichoderma reesei Family 7 cellulase is a flexible, disordered protein.

Beckham GT, Bomble YJ, Matthews JF, Taylor CB, Resch MG, Yarbrough JM, Decker SR, Bu L, Zhao X, McCabe C, Wohlert J, Bergenstråhle M, Brady JW, Adney WS, Himmel ME, Crowley MF.

Biophys J. 2010 Dec 1;99(11):3773-81. doi: 10.1016/j.bpj.2010.10.032.

12.

Structure of a fibronectin type III-like module from Clostridium thermocellum.

Alahuhta M, Xu Q, Brunecky R, Adney WS, Ding SY, Himmel ME, Lunin VV.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2010 Aug 1;66(Pt 8):878-80. doi: 10.1107/S1744309110022529. Epub 2010 Jul 27.

13.

Heterologous expression and extracellular secretion of cellulolytic enzymes by Zymomonas mobilis.

Linger JG, Adney WS, Darzins A.

Appl Environ Microbiol. 2010 Oct;76(19):6360-9. doi: 10.1128/AEM.00230-10. Epub 2010 Aug 6.

14.

The unique binding mode of cellulosomal CBM4 from Clostridium thermocellum cellobiohydrolase A.

Alahuhta M, Xu Q, Bomble YJ, Brunecky R, Adney WS, Ding SY, Himmel ME, Lunin VV.

J Mol Biol. 2010 Sep 17;402(2):374-87. doi: 10.1016/j.jmb.2010.07.028. Epub 2010 Jul 21.

PMID:
20654622
15.

Identification of amino acids responsible for processivity in a Family 1 carbohydrate-binding module from a fungal cellulase.

Beckham GT, Matthews JF, Bomble YJ, Bu L, Adney WS, Himmel ME, Nimlos MR, Crowley MF.

J Phys Chem B. 2010 Jan 28;114(3):1447-53. doi: 10.1021/jp908810a.

PMID:
20050714
16.

Computational simulations of the Trichoderma reesei cellobiohydrolase I acting on microcrystalline cellulose Ibeta: the enzyme-substrate complex.

Zhong L, Matthews JF, Hansen PI, Crowley MF, Cleary JM, Walker RC, Nimlos MR, Brooks CL 3rd, Adney WS, Himmel ME, Brady JW.

Carbohydr Res. 2009 Oct 12;344(15):1984-92. doi: 10.1016/j.carres.2009.07.005. Epub 2009 Jul 18.

PMID:
19699474
17.

The energy landscape for the interaction of the family 1 carbohydrate-binding module and the cellulose surface is altered by hydrolyzed glycosidic bonds.

Bu L, Beckham GT, Crowley MF, Chang CH, Matthews JF, Bomble YJ, Adney WS, Himmel ME, Nimlos MR.

J Phys Chem B. 2009 Aug 6;113(31):10994-1002. doi: 10.1021/jp904003z.

PMID:
19594145
18.

Complete genome of the cellulolytic thermophile Acidothermus cellulolyticus 11B provides insights into its ecophysiological and evolutionary adaptations.

Barabote RD, Xie G, Leu DH, Normand P, Necsulea A, Daubin V, Médigue C, Adney WS, Xu XC, Lapidus A, Parales RE, Detter C, Pujic P, Bruce D, Lavire C, Challacombe JF, Brettin TS, Berry AM.

Genome Res. 2009 Jun;19(6):1033-43. doi: 10.1101/gr.084848.108. Epub 2009 Mar 6.

19.

Detecting cellulase penetration into corn stover cell walls by immuno-electron microscopy.

Donohoe BS, Selig MJ, Viamajala S, Vinzant TB, Adney WS, Himmel ME.

Biotechnol Bioeng. 2009 Jun 15;103(3):480-9. doi: 10.1002/bit.22281.

PMID:
19266575
20.

Heterologous expression of glycosyl hydrolases in planta: a new departure for biofuels.

Taylor LE 2nd, Dai Z, Decker SR, Brunecky R, Adney WS, Ding SY, Himmel ME.

Trends Biotechnol. 2008 Aug;26(8):413-24. doi: 10.1016/j.tibtech.2008.05.002. Epub 2008 Jun 23. Review.

PMID:
18579242
21.

Hydrolysis of cellulose using ternary mixtures of purified celluloses.

Baker JO, Ehrman CI, Adney WS, Thomas SR, Himmel ME.

Appl Biochem Biotechnol. 1998 Spring;70-72:395-403. doi: 10.1007/BF02920154.

PMID:
18576007
22.

Implications of cellobiohydrolase glycosylation for use in biomass conversion.

Jeoh T, Michener W, Himmel ME, Decker SR, Adney WS.

Biotechnol Biofuels. 2008 May 1;1(1):10. doi: 10.1186/1754-6834-1-10.

23.

Heterologous expression of two ferulic acid esterases from Penicillium funiculosum.

Knoshaug EP, Selig MJ, Baker JO, Decker SR, Himmel ME, Adney WS.

Appl Biochem Biotechnol. 2008 Mar;146(1-3):79-87. doi: 10.1007/s12010-007-8074-2. Epub 2007 Dec 7.

PMID:
18421589
24.

Heterologous expression of Aspergillus niger beta-D-xylosidase (XlnD): characterization on lignocellulosic substrates.

Selig MJ, Knoshaug EP, Decker SR, Baker JO, Himmel ME, Adney WS.

Appl Biochem Biotechnol. 2008 Mar;146(1-3):57-68. doi: 10.1007/s12010-007-8069-z. Epub 2007 Nov 8.

PMID:
18421587
25.

Synergistic enhancement of cellobiohydrolase performance on pretreated corn stover by addition of xylanase and esterase activities.

Selig MJ, Knoshaug EP, Adney WS, Himmel ME, Decker SR.

Bioresour Technol. 2008 Jul;99(11):4997-5005. Epub 2007 Nov 19.

PMID:
18006303
26.

Molecular modeling suggests induced fit of Family I carbohydrate-binding modules with a broken-chain cellulose surface.

Nimlos MR, Matthews JF, Crowley MF, Walker RC, Chukkapalli G, Brady JW, Adney WS, Cleary JM, Zhong L, Himmel ME.

Protein Eng Des Sel. 2007 Apr;20(4):179-87. Epub 2007 Apr 12.

PMID:
17430975
27.

Cellulase digestibility of pretreated biomass is limited by cellulose accessibility.

Jeoh T, Ishizawa CI, Davis MF, Himmel ME, Adney WS, Johnson DK.

Biotechnol Bioeng. 2007 Sep 1;98(1):112-22.

PMID:
17335064
28.

Biomass recalcitrance: engineering plants and enzymes for biofuels production.

Himmel ME, Ding SY, Johnson DK, Adney WS, Nimlos MR, Brady JW, Foust TD.

Science. 2007 Feb 9;315(5813):804-7. Erratum in: Science. 2007 May 18;316(5827):982.

PMID:
17289988
29.

Expression and characterization of Acidothermus cellulolyticus E1 endoglucanase in transgenic duckweed Lemna minor 8627.

Sun Y, Cheng JJ, Himmel ME, Skory CD, Adney WS, Thomas SR, Tisserat B, Nishimura Y, Yamamoto YT.

Bioresour Technol. 2007 Nov;98(15):2866-72. Epub 2006 Nov 28.

PMID:
17127051
30.

Beta-D-glucosidase reaction kinetics from isothermal titration microcalorimetry.

Jeoh T, Baker JO, Ali MK, Himmel ME, Adney WS.

Anal Biochem. 2005 Dec 15;347(2):244-53. Epub 2005 Oct 13.

PMID:
16269126
31.

Catalytically enhanced endocellulase Cel5A from Acidothermus cellulolyticus.

Baker JO, McCarley JR, Lovett R, Yu CH, Adney WS, Rignall TR, Vinzant TB, Decker SR, Sakon J, Himmel ME.

Appl Biochem Biotechnol. 2005 Spring;121-124:129-48.

PMID:
15917594
32.

Automated filter paper assay for determination of cellulase activity.

Decker SR, Adney WS, Jennings E, Vinzant TB, Himmel ME.

Appl Biochem Biotechnol. 2003 Spring;105 -108:689-703.

PMID:
12721448
33.

Effect of single active-site cleft mutation on product specificity in a thermostable bacterial cellulase.

Rignall TR, Baker JO, McCarter SL, Adney WS, Vinzant TB, Decker SR, Himmel ME.

Appl Biochem Biotechnol. 2002 Spring;98-100:383-94.

PMID:
12018266
34.

Exploration of cellulose surface-binding properties of acidothermus cellulolyticus Cel5A by site-specific mutagenesis.

McCarter SL, Adney WS, Vinzant TB, Jennings E, Eddy FP, Decker SR, Baker JO, Sakon J, Himmel ME.

Appl Biochem Biotechnol. 2002 Spring;98-100:273-87.

PMID:
12018255
35.

Fingerprinting Trichoderma reesei hydrolases in a commercial cellulase preparation.

Vinzant TB, Adney WS, Decker SR, Baker JO, Kinter MT, Sherman NE, Fox JW, Himmel ME.

Appl Biochem Biotechnol. 2001 Spring;91-93:99-107.

PMID:
11963908
36.

Investigation of the cell-wall loosening protein expansin as a possible additive in the enzymatic saccharification of lignocellulosic biomass.

Baker JO, King MR, Adney WS, Decker SR, Vinzant TB, Lantz SE, Nieves RE, Thomas SR, Li LC, Cosgrove DJ, Himmel ME.

Appl Biochem Biotechnol. 2000 Spring;84-86:217-23. No abstract available.

PMID:
10849790
37.

Cloning and expression of Trichoderma reesei cellobiohydrolase I in Pichia pastoris.

Godbole S, Decker SR, Nieves RA, Adney WS, Vinzant TB, Baker JO, Thomas SR, Himmel ME.

Biotechnol Prog. 1999 Sep-Oct;15(5):828-33.

PMID:
10514252
38.

Hydrolysis of cellulose using ternary mixtures of purified cellulases.

Baker JO, Ehrman CI, Adney WS, Thomas SR, Himmel ME.

Appl Biochem Biotechnol. 1998 Spring;70-72:395-403.

PMID:
9627391
40.

Polysaccharide hydrolase folds diversity of structure and convergence of function.

Himmel ME, Karplus PA, Sakon J, Adney WS, Baker JO, Thomas SR.

Appl Biochem Biotechnol. 1997 Spring;63-65:315-25.

PMID:
18576090
41.

Crystal structure of thermostable family 5 endocellulase E1 from Acidothermus cellulolyticus in complex with cellotetraose.

Sakon J, Adney WS, Himmel ME, Thomas SR, Karplus PA.

Biochemistry. 1996 Aug 20;35(33):10648-60.

PMID:
8718854
42.

Cloning and expression of full-length Trichoderma reesei cellobiohydrolase I cDNAs in Escherichia coli.

Laymon RA, Adney WS, Mohagheghi A, Himmel ME, Thomas SR.

Appl Biochem Biotechnol. 1996 Spring;57-58:389-97.

PMID:
8669906
43.

Isolation and characterization of two forms of beta-D-glucosidase from Aspergillus niger.

Himmel ME, Adney WS, Fox JW, Mitchell DJ, Baker JO.

Appl Biochem Biotechnol. 1993 Spring;39-40:213-25.

PMID:
8323261
44.

Anaerobic digestion of lignocellulosic biomass and wastes. Cellulases and related enzymes.

Adney WS, Rivard CJ, Ming SA, Himmel ME.

Appl Biochem Biotechnol. 1991 Aug;30(2):165-83. Review.

PMID:
1952931
45.

Effect of Actinomyces pyogenes and gram-negative anaerobic bacteria on the development of bovine pyometra.

Farin PW, Ball L, Olson JD, Mortimer RG, Jones RL, Adney WS, McChesney AE.

Theriogenology. 1989 May;31(5):979-89.

PMID:
16726615
46.

Hemorrhagic necrotizing enterocolitis associated with Clostridium difficile infection in four foals.

Jones RL, Adney WS, Alexander AF, Shideler RK, Traub-Dargatz JL.

J Am Vet Med Assoc. 1988 Jul 1;193(1):76-9.

PMID:
3262102
47.

Evaluation of Quantum II microbiology system for identification of gram-negative bacteria of veterinary origin.

Jones RL, Adney WS, Davis MA, Vonbyren H, Thompson G.

J Clin Microbiol. 1987 Nov;25(11):2071-4.

49.

Anaerobic bacterial infections and response to treatment in dogs and cats: 36 cases (1983-1985).

Dow SW, Jones RL, Adney WS.

J Am Vet Med Assoc. 1986 Oct 15;189(8):930-4.

PMID:
2876976
50.

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