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Items: 1 to 50 of 121

1.

Intermittent Hypoxia and Hypercapnia, a Hallmark of Obstructive Sleep Apnea, Alters the Gut Microbiome and Metabolome.

Tripathi A, Melnik AV, Xue J, Poulsen O, Meehan MJ, Humphrey G, Jiang L, Ackermann G, McDonald D, Zhou D, Knight R, Dorrestein PC, Haddad GG.

mSystems. 2018 Jun 5;3(3). pii: e00020-18. doi: 10.1128/mSystems.00020-18. eCollection 2018 May-Jun.

2.

American Gut: an Open Platform for Citizen Science Microbiome Research.

McDonald D, Hyde E, Debelius JW, Morton JT, Gonzalez A, Ackermann G, Aksenov AA, Behsaz B, Brennan C, Chen Y, DeRight Goldasich L, Dorrestein PC, Dunn RR, Fahimipour AK, Gaffney J, Gilbert JA, Gogul G, Green JL, Hugenholtz P, Humphrey G, Huttenhower C, Jackson MA, Janssen S, Jeste DV, Jiang L, Kelley ST, Knights D, Kosciolek T, Ladau J, Leach J, Marotz C, Meleshko D, Melnik AV, Metcalf JL, Mohimani H, Montassier E, Navas-Molina J, Nguyen TT, Peddada S, Pevzner P, Pollard KS, Rahnavard G, Robbins-Pianka A, Sangwan N, Shorenstein J, Smarr L, Song SJ, Spector T, Swafford AD, Thackray VG, Thompson LR, Tripathi A, Vázquez-Baeza Y, Vrbanac A, Wischmeyer P, Wolfe E, Zhu Q; American Gut Consortium , Knight R.

mSystems. 2018 May 15;3(3). pii: e00031-18. doi: 10.1128/mSystems.00031-18. eCollection 2018 May-Jun.

3.

Exposure to toxic metals triggers unique responses from the rat gut microbiota.

Richardson JB, Dancy BCR, Horton CL, Lee YS, Madejczyk MS, Xu ZZ, Ackermann G, Humphrey G, Palacios G, Knight R, Lewis JA.

Sci Rep. 2018 Apr 26;8(1):6578. doi: 10.1038/s41598-018-24931-w.

4.

A communal catalogue reveals Earth's multiscale microbial diversity.

Thompson LR, Sanders JG, McDonald D, Amir A, Ladau J, Locey KJ, Prill RJ, Tripathi A, Gibbons SM, Ackermann G, Navas-Molina JA, Janssen S, Kopylova E, Vázquez-Baeza Y, González A, Morton JT, Mirarab S, Zech Xu Z, Jiang L, Haroon MF, Kanbar J, Zhu Q, Jin Song S, Kosciolek T, Bokulich NA, Lefler J, Brislawn CJ, Humphrey G, Owens SM, Hampton-Marcell J, Berg-Lyons D, McKenzie V, Fierer N, Fuhrman JA, Clauset A, Stevens RL, Shade A, Pollard KS, Goodwin KD, Jansson JK, Gilbert JA, Knight R; Earth Microbiome Project Consortium.

Nature. 2017 Nov 23;551(7681):457-463. doi: 10.1038/nature24621. Epub 2017 Nov 1.

PMID:
29088705
5.

Three-Dimensional Microbiome and Metabolome Cartography of a Diseased Human Lung.

Garg N, Wang M, Hyde E, da Silva RR, Melnik AV, Protsyuk I, Bouslimani A, Lim YW, Wong R, Humphrey G, Ackermann G, Spivey T, Brouha SS, Bandeira N, Lin GY, Rohwer F, Conrad DJ, Alexandrov T, Knight R, Dorrestein PC.

Cell Host Microbe. 2017 Nov 8;22(5):705-716.e4. doi: 10.1016/j.chom.2017.10.001. Epub 2017 Oct 19.

PMID:
29056429
6.

Impact of Dietary Resistant Starch on the Human Gut Microbiome, Metaproteome, and Metabolome.

Maier TV, Lucio M, Lee LH, VerBerkmoes NC, Brislawn CJ, Bernhardt J, Lamendella R, McDermott JE, Bergeron N, Heinzmann SS, Morton JT, González A, Ackermann G, Knight R, Riedel K, Krauss RM, Schmitt-Kopplin P, Jansson JK.

MBio. 2017 Oct 17;8(5). pii: e01343-17. doi: 10.1128/mBio.01343-17.

7.

The sponge microbiome project.

Moitinho-Silva L, Nielsen S, Amir A, Gonzalez A, Ackermann GL, Cerrano C, Astudillo-Garcia C, Easson C, Sipkema D, Liu F, Steinert G, Kotoulas G, McCormack GP, Feng G, Bell JJ, Vicente J, Björk JR, Montoya JM, Olson JB, Reveillaud J, Steindler L, Pineda MC, Marra MV, Ilan M, Taylor MW, Polymenakou P, Erwin PM, Schupp PJ, Simister RL, Knight R, Thacker RW, Costa R, Hill RT, Lopez-Legentil S, Dailianis T, Ravasi T, Hentschel U, Li Z, Webster NS, Thomas T.

Gigascience. 2017 Oct 1;6(10):1-7. doi: 10.1093/gigascience/gix077.

8.

Subtle shifts in microbial communities occur alongside the release of carbon induced by drought and rewetting in contrasting peatland ecosystems.

Potter C, Freeman C, Golyshin PN, Ackermann G, Fenner N, McDonald JE, Ehbair A, Jones TG, Murphy LM, Creer S.

Sci Rep. 2017 Sep 12;7(1):11314. doi: 10.1038/s41598-017-11546-w.

9.

Digitizing mass spectrometry data to explore the chemical diversity and distribution of marine cyanobacteria and algae.

Luzzatto-Knaan T, Garg N, Wang M, Glukhov E, Peng Y, Ackermann G, Amir A, Duggan BM, Ryazanov S, Gerwick L, Knight R, Alexandrov T, Bandeira N, Gerwick WH, Dorrestein PC.

Elife. 2017 May 11;6. pii: e24214. doi: 10.7554/eLife.24214.

10.

The Oral and Skin Microbiomes of Captive Komodo Dragons Are Significantly Shared with Their Habitat.

Hyde ER, Navas-Molina JA, Song SJ, Kueneman JG, Ackermann G, Cardona C, Humphrey G, Boyer D, Weaver T, Mendelson JR 3rd, McKenzie VJ, Gilbert JA, Knight R.

mSystems. 2016 Aug 2;1(4). pii: e00046-16. eCollection 2016 Jul-Aug.

11.

Improved Bacterial 16S rRNA Gene (V4 and V4-5) and Fungal Internal Transcribed Spacer Marker Gene Primers for Microbial Community Surveys.

Walters W, Hyde ER, Berg-Lyons D, Ackermann G, Humphrey G, Parada A, Gilbert JA, Jansson JK, Caporaso JG, Fuhrman JA, Apprill A, Knight R.

mSystems. 2015 Dec 22;1(1). pii: e00009-15. eCollection 2016 Jan-Feb.

12.

Prevalence and genetic diversity of Blastocystis in family units living in the United States.

Scanlan PD, Knight R, Song SJ, Ackermann G, Cotter PD.

Infect Genet Evol. 2016 Nov;45:95-97. doi: 10.1016/j.meegid.2016.08.018. Epub 2016 Aug 18.

PMID:
27545648
13.

Extreme Dysbiosis of the Microbiome in Critical Illness.

McDonald D, Ackermann G, Khailova L, Baird C, Heyland D, Kozar R, Lemieux M, Derenski K, King J, Vis-Kampen C, Knight R, Wischmeyer PE.

mSphere. 2016 Aug 31;1(4). pii: e00199-16. doi: 10.1128/mSphere.00199-16. eCollection 2016 Jul-Aug.

14.

Diversity, structure and convergent evolution of the global sponge microbiome.

Thomas T, Moitinho-Silva L, Lurgi M, Björk JR, Easson C, Astudillo-García C, Olson JB, Erwin PM, López-Legentil S, Luter H, Chaves-Fonnegra A, Costa R, Schupp PJ, Steindler L, Erpenbeck D, Gilbert J, Knight R, Ackermann G, Victor Lopez J, Taylor MW, Thacker RW, Montoya JM, Hentschel U, Webster NS.

Nat Commun. 2016 Jun 16;7:11870. doi: 10.1038/ncomms11870.

15.

Keemei: cloud-based validation of tabular bioinformatics file formats in Google Sheets.

Rideout JR, Chase JH, Bolyen E, Ackermann G, González A, Knight R, Caporaso JG.

Gigascience. 2016 Jun 13;5:27. doi: 10.1186/s13742-016-0133-6.

16.

Microbial community assembly and metabolic function during mammalian corpse decomposition.

Metcalf JL, Xu ZZ, Weiss S, Lax S, Van Treuren W, Hyde ER, Song SJ, Amir A, Larsen P, Sangwan N, Haarmann D, Humphrey GC, Ackermann G, Thompson LR, Lauber C, Bibat A, Nicholas C, Gebert MJ, Petrosino JF, Reed SC, Gilbert JA, Lynne AM, Bucheli SR, Carter DO, Knight R.

Science. 2016 Jan 8;351(6269):158-62. doi: 10.1126/science.aad2646. Epub 2015 Dec 10.

17.

Microbiota and Host Nutrition across Plant and Animal Kingdoms.

Hacquard S, Garrido-Oter R, González A, Spaepen S, Ackermann G, Lebeis S, McHardy AC, Dangl JL, Knight R, Ley R, Schulze-Lefert P.

Cell Host Microbe. 2015 May 13;17(5):603-16. doi: 10.1016/j.chom.2015.04.009. Review.

18.

Molecular cartography of the human skin surface in 3D.

Bouslimani A, Porto C, Rath CM, Wang M, Guo Y, Gonzalez A, Berg-Lyon D, Ackermann G, Moeller Christensen GJ, Nakatsuji T, Zhang L, Borkowski AW, Meehan MJ, Dorrestein K, Gallo RL, Bandeira N, Knight R, Alexandrov T, Dorrestein PC.

Proc Natl Acad Sci U S A. 2015 Apr 28;112(17):E2120-9. doi: 10.1073/pnas.1424409112. Epub 2015 Mar 30.

19.

Measuring success in obesity prevention: a synthesis of Health Promotion Switzerland's long-term monitoring and evaluation strategy.

Ackermann G, Kirschner M, Guggenbühl L, Abel B, Klohn A, Mattig T.

Obes Facts. 2015;8(1):17-29. doi: 10.1159/000374082. Epub 2015 Jan 29. Review.

20.

HLA-B27 and human β2-microglobulin affect the gut microbiota of transgenic rats.

Lin P, Bach M, Asquith M, Lee AY, Akileswaran L, Stauffer P, Davin S, Pan Y, Cambronne ED, Dorris M, Debelius JW, Lauber CL, Ackermann G, Baeza YV, Gill T, Knight R, Colbert RA, Taurog JD, Van Gelder RN, Rosenbaum JT.

PLoS One. 2014 Aug 20;9(8):e105684. doi: 10.1371/journal.pone.0105684. eCollection 2014.

21.

Vertebrate decomposition is accelerated by soil microbes.

Lauber CL, Metcalf JL, Keepers K, Ackermann G, Carter DO, Knight R.

Appl Environ Microbiol. 2014 Aug;80(16):4920-9. doi: 10.1128/AEM.00957-14. Epub 2014 Jun 6.

22.

A microbial clock provides an accurate estimate of the postmortem interval in a mouse model system.

Metcalf JL, Wegener Parfrey L, Gonzalez A, Lauber CL, Knights D, Ackermann G, Humphrey GC, Gebert MJ, Van Treuren W, Berg-Lyons D, Keepers K, Guo Y, Bullard J, Fierer N, Carter DO, Knight R.

Elife. 2013 Oct 15;2:e01104. doi: 10.7554/eLife.01104.

23.

Advancing our understanding of the human microbiome using QIIME.

Navas-Molina JA, Peralta-Sánchez JM, González A, McMurdie PJ, Vázquez-Baeza Y, Xu Z, Ursell LK, Lauber C, Zhou H, Song SJ, Huntley J, Ackermann GL, Berg-Lyons D, Holmes S, Caporaso JG, Knight R.

Methods Enzymol. 2013;531:371-444. doi: 10.1016/B978-0-12-407863-5.00019-8.

24.

Meta-analyses of studies of the human microbiota.

Lozupone CA, Stombaugh J, Gonzalez A, Ackermann G, Wendel D, Vázquez-Baeza Y, Jansson JK, Gordon JI, Knight R.

Genome Res. 2013 Oct;23(10):1704-14. doi: 10.1101/gr.151803.112. Epub 2013 Jul 16.

25.

[Haematuria, lymphadenopathy and splenomegaly: case report in a 22-year-old man and review of the literature].

Nenoff P, Schulze M, Ackermann G, Ackermann F, Handrick W.

Urologe A. 2010 Nov;49(11):1385-9. doi: 10.1007/s00120-010-2384-7. Review. German.

PMID:
20844860
26.

Comparison of resistance against erythromycin and moxifloxacin, presence of binary toxin gene and PCR ribotypes in Clostridium difficile isolates from 1990 and 2008.

Ilchmann C, Zaiss NH, Speicher A, Christner M, Ackermann G, Rohde H.

Eur J Clin Microbiol Infect Dis. 2010 Dec;29(12):1571-3. doi: 10.1007/s10096-010-1017-9. Epub 2010 Jul 15.

PMID:
20632051
27.
28.

Ca2+ signaling in mouse cardiomyocytes with ablated S100A1 protein.

Gusev K, Ackermann GE, Heizmann CW, Niggli E.

Gen Physiol Biophys. 2009 Dec;28(4):371-83.

PMID:
20097960
29.

Phototoxic reactions in healthy volunteers following photodynamic therapy with methylaminolevulinate cream or with cream containing 5-aminolevulinic acid: a phase II, randomized study.

Steinbauer J, Schreml S, Karrer S, Ackermann G, Babilas P, Landthaler M, Szeimies RM.

Photodermatol Photoimmunol Photomed. 2009 Oct;25(5):270-5. doi: 10.1111/j.1600-0781.2009.00455.x.

PMID:
19747247
30.

The role and regulation of friend of GATA-1 (FOG-1) during blood development in the zebrafish.

Amigo JD, Ackermann GE, Cope JJ, Yu M, Cooney JD, Ma D, Langer NB, Shafizadeh E, Shaw GC, Horsely W, Trede NS, Davidson AJ, Barut BA, Zhou Y, Wojiski SA, Traver D, Moran TB, Kourkoulis G, Hsu K, Kanki JP, Shah DI, Lin HF, Handin RI, Cantor AB, Paw BH.

Blood. 2009 Nov 19;114(21):4654-63. doi: 10.1182/blood-2008-12-189910. Epub 2009 Sep 3.

31.

The free gracilis perforator flap: anatomical study and clinical refinements of a new perforator flap.

Peek A, Müller M, Ackermann G, Exner K, Baumeister S.

Plast Reconstr Surg. 2009 Feb;123(2):578-88. doi: 10.1097/PRS.0b013e3181956519.

PMID:
19182616
32.

Holographic quantum eraser experiment reveals polarization structure of depolarized light.

Ackermann GK, Eichler J.

Appl Opt. 2008 Oct 20;47(30):5660-7.

PMID:
18936815
33.

S100A1 deficiency results in prolonged ventricular repolarization in response to sympathetic activation.

Ackermann GE, Domenighetti AA, Deten A, Bonath I, Marenholz I, Pedrazzini T, Erne P, Heizmann CW.

Gen Physiol Biophys. 2008 Jun;27(2):127-42.

PMID:
18645228
34.

Effect of sub-MIC concentrations of metronidazole, vancomycin, clindamycin and linezolid on toxin gene transcription and production in Clostridium difficile.

Gerber M, Walch C, Löffler B, Tischendorf K, Reischl U, Ackermann G.

J Med Microbiol. 2008 Jun;57(Pt 6):776-83. doi: 10.1099/jmm.0.47739-0.

PMID:
18480337
35.

OPT-80, a macrocyclic antimicrobial agent for the treatment of Clostridium difficile infections: a review.

Gerber M, Ackermann G.

Expert Opin Investig Drugs. 2008 Apr;17(4):547-53. doi: 10.1517/13543784.17.4.547 . Review.

PMID:
18363518
36.

Pathologies involving the S100 proteins and RAGE.

Heizmann CW, Ackermann GE, Galichet A.

Subcell Biochem. 2007;45:93-138. Review.

PMID:
18193636
37.

Modelling the results of health promotion activities in Switzerland: development of the Swiss Model for Outcome Classification in Health Promotion and Prevention.

Spencer B, Broesskamp-Stone U, Ruckstuhl B, Ackermann G, Spoerri A, Cloetta B.

Health Promot Int. 2008 Mar;23(1):86-97. Epub 2007 Dec 10.

38.

A case of Clostridium difficile-associated disease due to the highly virulent clone of Clostridium difficile PCR ribotype 027, March 2007 in Germany.

Zaiss NH, Weile J, Ackermann G, Kuijper E, Witte W, Nüebel U.

Euro Surveill. 2007 Nov 15;12(11):E071115.1. No abstract available.

39.

Fluorescence characteristics and pharmacokinetic properties of a novel self-adhesive 5-ALA patch for photodynamic therapy of actinic keratoses.

Fauteck JD, Ackermann G, Birkel M, Breuer M, Moor AC, Ebeling A, Ortland C.

Arch Dermatol Res. 2008 Feb;300(2):53-60. Epub 2007 Oct 25.

PMID:
17960406
40.

Prevalence of enterotoxin producing Staphylococcus aureus in stools of patients with nosocomial diarrhea.

Flemming K, Ackermann G.

Infection. 2007 Oct;35(5):356-8. Epub 2007 Aug 25.

PMID:
17721737
41.

Antimicrobial phenotypes and molecular basis in clinical strains of Clostridium difficile.

Schmidt C, Löffler B, Ackermann G.

Diagn Microbiol Infect Dis. 2007 Sep;59(1):1-5. Epub 2007 May 16.

PMID:
17509804
42.

S100A1-deficient male mice exhibit increased exploratory activity and reduced anxiety-related responses.

Ackermann GE, Marenholz I, Wolfer DP, Chan WY, Schäfer B, Erne P, Heizmann CW.

Biochim Biophys Acta. 2006 Nov;1763(11):1307-19. Epub 2006 Sep 6.

43.

Therapeutic efficacy of moxifloxacin in a murine model of severe systemic mixed infection with Escherichia coli and Bacteroides fragilis.

Eckhardt C, Fickweiler K, Schaumann R, Ackermann G, Rodloff AC.

Anaerobe. 2003 Aug;9(4):157-60.

PMID:
16887704
44.

Mitoferrin is essential for erythroid iron assimilation.

Shaw GC, Cope JJ, Li L, Corson K, Hersey C, Ackermann GE, Gwynn B, Lambert AJ, Wingert RA, Traver D, Trede NS, Barut BA, Zhou Y, Minet E, Donovan A, Brownlie A, Balzan R, Weiss MJ, Peters LL, Kaplan J, Zon LI, Paw BH.

Nature. 2006 Mar 2;440(7080):96-100.

PMID:
16511496
45.

[Model for the systematic classification of outcomes in health promotion and prevention].

Cloetta B, Spencer B, Spörri A, Ruckstuhl B, Broesskamp-Stone U, Ackermann G.

Promot Educ. 2005;12(2):88-93, 81. French.

PMID:
16429762
46.

[Fluorescence diagnosis in dermatology].

Bäumler W, Ackermann G, Abels C, Szeimies RM.

J Dtsch Dermatol Ges. 2003 Jul;1(7):569-78; quiz 580-1. Review. German. No abstract available.

PMID:
16295043
47.

Vascular endothelial growth factor receptor signaling is required for cardiac valve formation in zebrafish.

Lee YM, Cope JJ, Ackermann GE, Goishi K, Armstrong EJ, Paw BH, Bischoff J.

Dev Dyn. 2006 Jan;235(1):29-37.

48.

Zebrafish slc4a2/ae2 anion exchanger: cDNA cloning, mapping, functional characterization, and localization.

Shmukler BE, Kurschat CE, Ackermann GE, Jiang L, Zhou Y, Barut B, Stuart-Tilley AK, Zhao J, Zon LI, Drummond IA, Vandorpe DH, Paw BH, Alper SL.

Am J Physiol Renal Physiol. 2005 Oct;289(4):F835-49. Epub 2005 May 24.

49.

Prevalence of the ermB gene in Clostridium difficile strains isolated at a university teaching hospital from 1987 through 1998.

Tang-Feldman YJ, Henderson JP, Ackermann G, Feldman SS, Bedley M, Silva J Jr, Cohen SH.

Clin Infect Dis. 2005 May 15;40(10):1537-40. Epub 2005 Apr 12.

PMID:
15844079
50.

Prevalence and characteristics of bacteria and host factors in an outbreak situation of antibiotic-associated diarrhoea.

Ackermann G, Thomalla S, Ackermann F, Schaumann R, Rodloff AC, Ruf BR.

J Med Microbiol. 2005 Feb;54(Pt 2):149-53.

PMID:
15673508

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