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Items: 18

1.

Cooperation between T cell receptor and Toll-like receptor 5 signaling for CD4+ T cell activation.

Rodríguez-Jorge O, Kempis-Calanis LA, Abou-Jaoudé W, Gutiérrez-Reyna DY, Hernandez C, Ramirez-Pliego O, Thomas-Chollier M, Spicuglia S, Santana MA, Thieffry D.

Sci Signal. 2019 Apr 16;12(577). pii: eaar3641. doi: 10.1126/scisignal.aar3641.

PMID:
30992399
2.

On logical bifurcation diagrams.

Abou-Jaoudé W, Monteiro PT.

J Theor Biol. 2019 Apr 7;466:39-63. doi: 10.1016/j.jtbi.2019.01.008. Epub 2019 Jan 15.

3.

Logical Modeling and Analysis of Cellular Regulatory Networks With GINsim 3.0.

Naldi A, Hernandez C, Abou-Jaoudé W, Monteiro PT, Chaouiya C, Thieffry D.

Front Physiol. 2018 Jun 19;9:646. doi: 10.3389/fphys.2018.00646. eCollection 2018.

4.

Logical modeling of lymphoid and myeloid cell specification and transdifferentiation.

Collombet S, van Oevelen C, Sardina Ortega JL, Abou-Jaoudé W, Di Stefano B, Thomas-Chollier M, Graf T, Thieffry D.

Proc Natl Acad Sci U S A. 2017 Jun 6;114(23):5792-5799. doi: 10.1073/pnas.1610622114.

5.

Formal derivation of qualitative dynamical models from biochemical networks.

Abou-Jaoudé W, Thieffry D, Feret J.

Biosystems. 2016 Nov;149:70-112. doi: 10.1016/j.biosystems.2016.09.001. Epub 2016 Sep 9.

6.

Logical Modeling and Dynamical Analysis of Cellular Networks.

Abou-Jaoudé W, Traynard P, Monteiro PT, Saez-Rodriguez J, Helikar T, Thieffry D, Chaouiya C.

Front Genet. 2016 May 31;7:94. doi: 10.3389/fgene.2016.00094. eCollection 2016. Review.

7.

Model checking to assess T-helper cell plasticity.

Abou-Jaoudé W, Monteiro PT, Naldi A, Grandclaudon M, Soumelis V, Chaouiya C, Thieffry D.

Front Bioeng Biotechnol. 2015 Jan 28;2:86. doi: 10.3389/fbioe.2014.00086. eCollection 2014.

8.

Links between topology of the transition graph and limit cycles in a two-dimensional piecewise affine biological model.

Abou-Jaoudé W, Chaves M, Gouzé JL.

J Math Biol. 2014 Dec;69(6-7):1461-95. doi: 10.1007/s00285-013-0735-x. Epub 2013 Nov 20.

PMID:
24253252
9.

The Goodwin model: behind the Hill function.

Gonze D, Abou-Jaoudé W.

PLoS One. 2013 Aug 1;8(8):e69573. doi: 10.1371/journal.pone.0069573. Print 2013.

10.

Sex matching plays a role in outcome of kidney transplant.

Abou-Jaoude MM, Abou-Jaoude WJ, Almawi WY.

Exp Clin Transplant. 2012 Oct;10(5):466-70. Retraction in: Exp Clin Transplant. 2013 Feb;11(1):85.

11.

A theoretical exploration of birhythmicity in the p53-Mdm2 network.

Abou-Jaoudé W, Chaves M, Gouzé JL.

PLoS One. 2011 Feb 14;6(2):e17075. doi: 10.1371/journal.pone.0017075.

12.

How molecular should your molecular model be? On the level of molecular detail required to simulate biological networks in systems and synthetic biology.

Gonze D, Abou-Jaoudé W, Ouattara DA, Halloy J.

Methods Enzymol. 2011;487:171-215. doi: 10.1016/B978-0-12-381270-4.00007-X.

PMID:
21187226
13.

From structure to dynamics: frequency tuning in the p53-Mdm2 network. II Differential and stochastic approaches.

Ouattara DA, Abou-Jaoudé W, Kaufman M.

J Theor Biol. 2010 Jun 21;264(4):1177-89. doi: 10.1016/j.jtbi.2010.03.031. Epub 2010 Mar 25.

PMID:
20346959
14.

From structure to dynamics: frequency tuning in the p53-Mdm2 network I. Logical approach.

Abou-Jaoudé W, Ouattara DA, Kaufman M.

J Theor Biol. 2009 Jun 21;258(4):561-77. doi: 10.1016/j.jtbi.2009.02.005. Epub 2009 Feb 21.

PMID:
19233211
16.

Nitric oxide induces murine thymocyte apoptosis by oxidative injury and a p53-dependent mechanism.

Gordon SA, Abou-Jaoude W, Hoffman RA, McCarthy SA, Kim YM, Zhou X, Zhang XR, Simmons RL, Chen Y, Schall L, Ford HR.

J Leukoc Biol. 2001 Jul;70(1):87-95.

PMID:
11435490
17.

Mesenteric venous thrombosis: a renewed diagnostic and therapeutic challenge.

Allen JW, Gable DR, Abou-Jaoude W, Polk HC Jr.

J Ky Med Assoc. 2000 May;98(5):202-9. Review. No abstract available.

PMID:
10835835
18.

Indicators of genitourinary tract injury or anomaly in cases of pediatric blunt trauma.

Abou-Jaoude WA, Sugarman JM, Fallat ME, Casale AJ.

J Pediatr Surg. 1996 Jan;31(1):86-9; discussion 90.

PMID:
8632293

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