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Items: 14

1.

Haplotype Networking of GWAS Hits for Citrulline Variation Associated with the Domestication of Watermelon.

Joshi V, Shinde S, Nimmakayala P, Abburi VL, Alaparthi SB, Lopez-Ortiz C, Levi A, Panicker G, Reddy UK.

Int J Mol Sci. 2019 Oct 29;20(21). pii: E5392. doi: 10.3390/ijms20215392.

2.

Genome of 'Charleston Gray', the principal American watermelon cultivar, and genetic characterization of 1,365 accessions in the U.S. National Plant Germplasm System watermelon collection.

Wu S, Wang X, Reddy U, Sun H, Bao K, Gao L, Mao L, Patel T, Ortiz C, Abburi VL, Nimmakayala P, Branham S, Wechter P, Massey L, Ling KS, Kousik C, Hammar SA, Tadmor Y, Portnoy V, Gur A, Katzir N, Guner N, Davis A, Hernandez AG, Wright CL, McGregor C, Jarret R, Zhang X, Xu Y, Wehner TC, Grumet R, Levi A, Fei Z.

Plant Biotechnol J. 2019 Dec;17(12):2246-2258. doi: 10.1111/pbi.13136. Epub 2019 May 7.

3.

Elevated carbon dioxide and drought modulate physiology and storage-root development in sweet potato by regulating microRNAs.

Saminathan T, Alvarado A, Lopez C, Shinde S, Gajanayake B, Abburi VL, Vajja VG, Jagadeeswaran G, Raja Reddy K, Nimmakayala P, Reddy UK.

Funct Integr Genomics. 2019 Jan;19(1):171-190. doi: 10.1007/s10142-018-0635-7. Epub 2018 Sep 22.

PMID:
30244303
4.

Metagenomic and Metatranscriptomic Analyses of Diverse Watermelon Cultivars Reveal the Role of Fruit Associated Microbiome in Carbohydrate Metabolism and Ripening of Mature Fruits.

Saminathan T, GarcĂ­a M, Ghimire B, Lopez C, Bodunrin A, Nimmakayala P, Abburi VL, Levi A, Balagurusamy N, Reddy UK.

Front Plant Sci. 2018 Jan 19;9:4. doi: 10.3389/fpls.2018.00004. eCollection 2018.

5.

Genome-wide divergence, haplotype distribution and population demographic histories for Gossypium hirsutum and Gossypium barbadense as revealed by genome-anchored SNPs.

Reddy UK, Nimmakayala P, Abburi VL, Reddy CV, Saminathan T, Percy RG, Yu JZ, Frelichowski J, Udall JA, Page JT, Zhang D, Shehzad T, Paterson AH.

Sci Rep. 2017 Jan 27;7:41285. doi: 10.1038/srep41285.

6.

Genome-wide Diversity and Association Mapping for Capsaicinoids and Fruit Weight in Capsicum annuum L.

Nimmakayala P, Abburi VL, Saminathan T, Alaparthi SB, Almeida A, Davenport B, Nadimi M, Davidson J, Tonapi K, Yadav L, Malkaram S, Vajja G, Hankins G, Harris R, Park M, Choi D, Stommel J, Reddy UK.

Sci Rep. 2016 Nov 30;6:38081. doi: 10.1038/srep38081.

7.

Genome-Wide Divergence and Linkage Disequilibrium Analyses for Capsicum baccatum Revealed by Genome-Anchored Single Nucleotide Polymorphisms.

Nimmakayala P, Abburi VL, Saminathan T, Almeida A, Davenport B, Davidson J, Reddy CV, Hankins G, Ebert A, Choi D, Stommel J, Reddy UK.

Front Plant Sci. 2016 Nov 3;7:1646. eCollection 2016.

8.

Genome-Wide Differentiation of Various Melon Horticultural Groups for Use in GWAS for Fruit Firmness and Construction of a High Resolution Genetic Map.

Nimmakayala P, Tomason YR, Abburi VL, Alvarado A, Saminathan T, Vajja VG, Salazar G, Panicker GK, Levi A, Wechter WP, McCreight JD, Korol AB, Ronin Y, Garcia-Mas J, Reddy UK.

Front Plant Sci. 2016 Sep 22;7:1437. eCollection 2016.

9.

Genetic diversity and association mapping of bacterial blight and other horticulturally important traits with microsatellite markers in pomegranate from India.

Singh NV, Abburi VL, Ramajayam D, Kumar R, Chandra R, Sharma KK, Sharma J, Babu KD, Pal RK, Mundewadikar DM, Saminathan T, Cantrell R, Nimmakayala P, Reddy UK.

Mol Genet Genomics. 2015 Aug;290(4):1393-402. doi: 10.1007/s00438-015-1003-0. Epub 2015 Feb 13.

PMID:
25675870
10.

A genome-wide scan of selective sweeps and association mapping of fruit traits using microsatellite markers in watermelon.

Reddy UK, Abburi L, Abburi VL, Saminathan T, Cantrell R, Vajja VG, Reddy R, Tomason YR, Levi A, Wehner TC, Nimmakayala P.

J Hered. 2015 Mar-Apr;106(2):166-76. doi: 10.1093/jhered/esu077. Epub 2014 Nov 25.

11.

High-resolution genetic map for understanding the effect of genome-wide recombination rate on nucleotide diversity in watermelon.

Reddy UK, Nimmakayala P, Levi A, Abburi VL, Saminathan T, Tomason YR, Vajja G, Reddy R, Abburi L, Wehner TC, Ronin Y, Karol A.

G3 (Bethesda). 2014 Sep 15;4(11):2219-30. doi: 10.1534/g3.114.012815.

12.

Single nucleotide polymorphisms generated by genotyping by sequencing to characterize genome-wide diversity, linkage disequilibrium, and selective sweeps in cultivated watermelon.

Nimmakayala P, Levi A, Abburi L, Abburi VL, Tomason YR, Saminathan T, Vajja VG, Malkaram S, Reddy R, Wehner TC, Mitchell SE, Reddy UK.

BMC Genomics. 2014 Sep 8;15:767. doi: 10.1186/1471-2164-15-767.

13.

Linkage disequilibrium and population-structure analysis among Capsicum annuum L. cultivars for use in association mapping.

Nimmakayala P, Abburi VL, Abburi L, Alaparthi SB, Cantrell R, Park M, Choi D, Hankins G, Malkaram S, Reddy UK.

Mol Genet Genomics. 2014 Aug;289(4):513-21. doi: 10.1007/s00438-014-0827-3. Epub 2014 Mar 2.

PMID:
24585251
14.

Identification of gene-specific polymorphisms and association with capsaicin pathway metabolites in Capsicum annuum L. collections.

Reddy UK, Almeida A, Abburi VL, Alaparthi SB, Unselt D, Hankins G, Park M, Choi D, Nimmakayala P.

PLoS One. 2014 Jan 27;9(1):e86393. doi: 10.1371/journal.pone.0086393. eCollection 2014.

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