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Best matches for Šrajer V[au]:

Watching Proteins Function with Time-resolved X-ray Crystallography. Šrajer V et al. J Phys D Appl Phys. (2017)

Electric-field-stimulated protein mechanics. Hekstra DR et al. Nature. (2016)

Pink-beam serial crystallography. Meents A et al. Nat Commun. (2017)

Search results

Items: 47

1.

Watching Proteins Function with Time-resolved X-ray Crystallography.

Šrajer V, Schmidt M.

J Phys D Appl Phys. 2017 Sep 20;50(37). pii: 373001. doi: 10.1088/1361-6463/aa7d32. Epub 2017 Aug 22.

2.

Pink-beam serial crystallography.

Meents A, Wiedorn MO, Srajer V, Henning R, Sarrou I, Bergtholdt J, Barthelmess M, Reinke PYA, Dierksmeyer D, Tolstikova A, Schaible S, Messerschmidt M, Ogata CM, Kissick DJ, Taft MH, Manstein DJ, Lieske J, Oberthuer D, Fischetti RF, Chapman HN.

Nat Commun. 2017 Nov 3;8(1):1281. doi: 10.1038/s41467-017-01417-3.

3.

Electric-field-stimulated protein mechanics.

Hekstra DR, White KI, Socolich MA, Henning RW, Šrajer V, Ranganathan R.

Nature. 2016 Dec 15;540(7633):400-405. doi: 10.1038/nature20571. Epub 2016 Dec 7.

4.

Graphene-based microfluidics for serial crystallography.

Sui S, Wang Y, Kolewe KW, Srajer V, Henning R, Schiffman JD, Dimitrakopoulos C, Perry SL.

Lab Chip. 2016 Aug 2;16(16):3082-96. doi: 10.1039/c6lc00451b.

5.

Femtosecond structural dynamics drives the trans/cis isomerization in photoactive yellow protein.

Pande K, Hutchison CD, Groenhof G, Aquila A, Robinson JS, Tenboer J, Basu S, Boutet S, DePonte DP, Liang M, White TA, Zatsepin NA, Yefanov O, Morozov D, Oberthuer D, Gati C, Subramanian G, James D, Zhao Y, Koralek J, Brayshaw J, Kupitz C, Conrad C, Roy-Chowdhury S, Coe JD, Metz M, Xavier PL, Grant TD, Koglin JE, Ketawala G, Fromme R, Šrajer V, Henning R, Spence JC, Ourmazd A, Schwander P, Weierstall U, Frank M, Fromme P, Barty A, Chapman HN, Moffat K, van Thor JJ, Schmidt M.

Science. 2016 May 6;352(6286):725-9. doi: 10.1126/science.aad5081. Epub 2016 May 5.

6.

Towards time-resolved serial crystallography in a microfluidic device.

Pawate AS, Šrajer V, Schieferstein J, Guha S, Henning R, Kosheleva I, Schmidt M, Ren Z, Kenis PJ, Perry SL.

Acta Crystallogr F Struct Biol Commun. 2015 Jul;71(Pt 7):823-30. doi: 10.1107/S2053230X15009061. Epub 2015 Jun 27.

7.

Room temperature crystal structure of the fast switching M159T mutant of the fluorescent protein dronpa.

Kaucikas M, Fitzpatrick A, Bryan E, Struve A, Henning R, Kosheleva I, Srajer V, Groenhof G, Van Thor JJ.

Proteins. 2015 Mar;83(3):397-402. doi: 10.1002/prot.24742. Epub 2015 Jan 13.

8.

In situ serial Laue diffraction on a microfluidic crystallization device.

Perry SL, Guha S, Pawate AS, Henning R, Kosheleva I, Srajer V, Kenis PJ, Ren Z.

J Appl Crystallogr. 2014 Nov 18;47(Pt 6):1975-1982. eCollection 2014 Dec 1.

9.

Time-resolved serial crystallography captures high-resolution intermediates of photoactive yellow protein.

Tenboer J, Basu S, Zatsepin N, Pande K, Milathianaki D, Frank M, Hunter M, Boutet S, Williams GJ, Koglin JE, Oberthuer D, Heymann M, Kupitz C, Conrad C, Coe J, Roy-Chowdhury S, Weierstall U, James D, Wang D, Grant T, Barty A, Yefanov O, Scales J, Gati C, Seuring C, Srajer V, Henning R, Schwander P, Fromme R, Ourmazd A, Moffat K, Van Thor JJ, Spence JC, Fromme P, Chapman HN, Schmidt M.

Science. 2014 Dec 5;346(6214):1242-6. doi: 10.1126/science.1259357.

10.

Signal to noise considerations for single crystal femtosecond time resolved crystallography of the Photoactive Yellow Protein.

van Thor JJ, Warren MM, Lincoln CN, Chollet M, Lemke HT, Fritz DM, Schmidt M, Tenboer J, Ren Z, Srajer V, Moffat K, Graber T.

Faraday Discuss. 2014;171:439-55. doi: 10.1039/c4fd00011k. Epub 2014 Jul 30.

PMID:
25415305
11.

Reply to 'contradictions in X-ray structures of intermediates in the photocycle of photoactive yellow protein'.

Jung YO, Lee JH, Kim J, Schmidt M, Moffat K, Šrajer V, Ihee H.

Nat Chem. 2014 Apr;6(4):259-60. doi: 10.1038/nchem.1897. No abstract available.

12.

Protein energy landscapes determined by five-dimensional crystallography.

Schmidt M, Srajer V, Henning R, Ihee H, Purwar N, Tenboer J, Tripathi S.

Acta Crystallogr D Biol Crystallogr. 2013 Dec;69(Pt 12):2534-42. doi: 10.1107/S0907444913025997. Epub 2013 Nov 19.

13.

Functional consequences of the open distal pocket of dehaloperoxidase-hemoglobin observed by time-resolved X-ray crystallography.

Zhao J, Srajer V, Franzen S.

Biochemistry. 2013 Nov 12;52(45):7943-50. doi: 10.1021/bi401118q. Epub 2013 Oct 28.

14.

Resolution of structural heterogeneity in dynamic crystallography.

Ren Z, Chan PW, Moffat K, Pai EF, Royer WE Jr, Šrajer V, Yang X.

Acta Crystallogr D Biol Crystallogr. 2013 Jun;69(Pt 6):946-59. doi: 10.1107/S0907444913003454. Epub 2013 May 2.

15.

Volume-conserving trans-cis isomerization pathways in photoactive yellow protein visualized by picosecond X-ray crystallography.

Jung YO, Lee JH, Kim J, Schmidt M, Moffat K, Srajer V, Ihee H.

Nat Chem. 2013 Mar;5(3):212-20. doi: 10.1038/nchem.1565. Epub 2013 Feb 3.

16.

Laue crystal structure of Shewanella oneidensis cytochrome c nitrite reductase from a high-yield expression system.

Youngblut M, Judd ET, Srajer V, Sayyed B, Goelzer T, Elliott SJ, Schmidt M, Pacheco AA.

J Biol Inorg Chem. 2012 Apr;17(4):647-62. doi: 10.1007/s00775-012-0885-0. Epub 2012 Mar 2.

17.

pH dependence of the photoactive yellow protein photocycle investigated by time-resolved crystallography.

Tripathi S, Srajer V, Purwar N, Henning R, Schmidt M.

Biophys J. 2012 Jan 18;102(2):325-32. doi: 10.1016/j.bpj.2011.11.4021.

18.

The kinetic dose limit in room-temperature time-resolved macromolecular crystallography.

Schmidt M, Šrajer V, Purwar N, Tripathi S.

J Synchrotron Radiat. 2012 Mar;19(Pt 2):264-73. doi: 10.1107/S090904951105549X. Epub 2012 Jan 18.

19.

Cooperative macromolecular device revealed by meta-analysis of static and time-resolved structures.

Ren Z, Srajer V, Knapp JE, Royer WE Jr.

Proc Natl Acad Sci U S A. 2012 Jan 3;109(1):107-12. doi: 10.1073/pnas.1109213108. Epub 2011 Dec 14.

20.

BioCARS: a synchrotron resource for time-resolved X-ray science.

Graber T, Anderson S, Brewer H, Chen YS, Cho HS, Dashdorj N, Henning RW, Kosheleva I, Macha G, Meron M, Pahl R, Ren Z, Ruan S, Schotte F, Srajer V, Viccaro PJ, Westferro F, Anfinrud P, Moffat K.

J Synchrotron Radiat. 2011 Jul;18(Pt 4):658-70. doi: 10.1107/S0909049511009423. Epub 2011 May 12.

21.

Five-dimensional crystallography.

Schmidt M, Graber T, Henning R, Srajer V.

Acta Crystallogr A. 2010 Mar;66(Pt 2):198-206. doi: 10.1107/S0108767309054166. Epub 2010 Feb 18.

22.

Ligand migration and cavities within Scapharca Dimeric HbI: studies by time-resolved crystallo-graphy, Xe binding, and computational analysis.

Knapp JE, Pahl R, Cohen J, Nichols JC, Schulten K, Gibson QH, Srajer V, Royer WE Jr.

Structure. 2009 Nov 11;17(11):1494-504. doi: 10.1016/j.str.2009.09.004.

23.

Time-resolved x-ray crystallography of heme proteins.

Srajer V, Royer WE Jr.

Methods Enzymol. 2008;437:379-95. doi: 10.1016/S0076-6879(07)37019-5. Review.

24.
25.

Allosteric action in real time: time-resolved crystallographic studies of a cooperative dimeric hemoglobin.

Knapp JE, Pahl R, Srajer V, Royer WE Jr.

Proc Natl Acad Sci U S A. 2006 May 16;103(20):7649-54. Epub 2006 May 9.

26.

Extraction of accurate structure-factor amplitudes from Laue data: wavelength normalization with wiggler and undulator X-ray sources.

Srajer V, Crosson S, Schmidt M, Key J, Schotte F, Anderson S, Perman B, Ren Z, Teng TY, Bourgeois D, Wulff M, Moffat K.

J Synchrotron Radiat. 2000 Jul 1;7(Pt 4):236-44. Epub 2000 Jul 1.

PMID:
16609201
27.

Ligand migration pathway and protein dynamics in myoglobin: a time-resolved crystallographic study on L29W MbCO.

Schmidt M, Nienhaus K, Pahl R, Krasselt A, Anderson S, Parak F, Nienhaus GU, Srajer V.

Proc Natl Acad Sci U S A. 2005 Aug 16;102(33):11704-9. Epub 2005 Aug 5.

28.

Protein-ligand interaction probed by time-resolved crystallography.

Schmidt M, Ihee H, Pahl R, Srajer V.

Methods Mol Biol. 2005;305:115-54.

PMID:
15939996
29.

Visualizing reaction pathways in photoactive yellow protein from nanoseconds to seconds.

Ihee H, Rajagopal S, Srajer V, Pahl R, Anderson S, Schmidt M, Schotte F, Anfinrud PA, Wulff M, Moffat K.

Proc Natl Acad Sci U S A. 2005 May 17;102(20):7145-50. Epub 2005 May 3.

30.

A structural pathway for signaling in the E46Q mutant of photoactive yellow protein.

Rajagopal S, Anderson S, Srajer V, Schmidt M, Pahl R, Moffat K.

Structure. 2005 Jan;13(1):55-63.

31.
32.

Chromophore conformation and the evolution of tertiary structural changes in photoactive yellow protein.

Anderson S, Srajer V, Pahl R, Rajagopal S, Schotte F, Anfinrud P, Wulff M, Moffat K.

Structure. 2004 Jun;12(6):1039-45.

33.

Time-resolved crystallographic studies of light-induced structural changes in the photosynthetic reaction center.

Baxter RH, Ponomarenko N, Srajer V, Pahl R, Moffat K, Norris JR.

Proc Natl Acad Sci U S A. 2004 Apr 20;101(16):5982-7. Epub 2004 Apr 8.

34.

Protein kinetics: structures of intermediates and reaction mechanism from time-resolved x-ray data.

Schmidt M, Pahl R, Srajer V, Anderson S, Ren Z, Ihee H, Rajagopal S, Moffat K.

Proc Natl Acad Sci U S A. 2004 Apr 6;101(14):4799-804. Epub 2004 Mar 23.

35.
36.

Protein conformational relaxation and ligand migration in myoglobin: a nanosecond to millisecond molecular movie from time-resolved Laue X-ray diffraction.

Srajer V, Ren Z, Teng TY, Schmidt M, Ursby T, Bourgeois D, Pradervand C, Schildkamp W, Wulff M, Moffat K.

Biochemistry. 2001 Nov 20;40(46):13802-15.

PMID:
11705369
37.

A molecular movie at 1.8 A resolution displays the photocycle of photoactive yellow protein, a eubacterial blue-light receptor, from nanoseconds to seconds.

Ren Z, Perman B, Srajer V, Teng TY, Pradervand C, Bourgeois D, Schotte F, Ursby T, Kort R, Wulff M, Moffat K.

Biochemistry. 2001 Nov 20;40(46):13788-801.

PMID:
11705368
38.

Energy transduction on the nanosecond time scale: early structural events in a xanthopsin photocycle.

Perman B, Srajer V, Ren Z, Teng T, Pradervand C, Ursby T, Bourgeois D, Schotte F, Wulff M, Kort R, Hellingwerf K, Moffat K.

Science. 1998 Mar 20;279(5358):1946-50.

39.

Initial trajectory of carbon monoxide after photodissociation from myoglobin at cryogenic temperatures.

Teng TY, Srajer V, Moffat K.

Biochemistry. 1997 Oct 7;36(40):12087-100.

PMID:
9315847
40.

Structure of a protein photocycle intermediate by millisecond time-resolved crystallography.

Genick UK, Borgstahl GE, Ng K, Ren Z, Pradervand C, Burke PM, Srajer V, Teng TY, Schildkamp W, McRee DE, Moffat K, Getzoff ED.

Science. 1997 Mar 7;275(5305):1471-5.

41.

Photolysis of the carbon monoxide complex of myoglobin: nanosecond time-resolved crystallography.

Srajer V, Teng T, Ursby T, Pradervand C, Ren Z, Adachi S, Schildkamp W, Bourgeois D, Wulff M, Moffat K.

Science. 1996 Dec 6;274(5293):1726-9.

PMID:
8939867
42.

Feasibility and Realization of Single-Pulse Laue Diffraction on Macromolecular Crystals at ESRF.

Bourgeois D, Ursby T, Wulff M, Pradervand C, Legrand A, Schildkamp W, Labouré S, Srajer V, Teng TY, Roth M, Moffat K.

J Synchrotron Radiat. 1996 Mar 1;3(Pt 2):65-74.

PMID:
16702661
43.

Photolysis-induced structural changes in single crystals of carbonmonoxy myoglobin at 40 K.

Teng TY, Srajer V, Moffat K.

Nat Struct Biol. 1994 Oct;1(10):701-5.

PMID:
7634074
44.

Relaxation dynamics of myoglobin in solution.

Tian WD, Sage JT, Srajer V V, Champion PM.

Phys Rev Lett. 1992 Jan 20;68(3):408-411. No abstract available.

PMID:
10045884
45.

Investigations of optical line shapes and kinetic hole burning in myoglobin.

Srajer V, Champion PM.

Biochemistry. 1991 Jul 30;30(30):7390-402.

PMID:
1854744
46.

Investigation of laser-induced long-lived states of photolyzed MbCO.

Srajer V, Reinisch L, Champion PM.

Biochemistry. 1991 May 21;30(20):4886-95.

PMID:
2036357
47.

Spectral broadening in biomolecules.

Srajer V V, Schomacker KT, Champion PM.

Phys Rev Lett. 1986 Sep 8;57(10):1267-1270. No abstract available.

PMID:
10033400

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