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Items: 1 to 50 of 108

1.

Strain diversity of Treponema pallidum subsp. pertenue suggests rare interspecies transmission in African nonhuman primates.

Chuma IS, Roos C, Atickem A, Bohm T, Anthony Collins D, Grillová L, Hallmaier-Wacker LK, Kazwala RR, Keyyu JD, Lüert S, Maloueki U, Oppelt J, Petrželková KJ, Piel A, Stewart FA, Šmajs D, Knauf S.

Sci Rep. 2019 Oct 2;9(1):14243. doi: 10.1038/s41598-019-50779-9.

2.

Colicin U from Shigella boydii forms voltage-dependent pores.

Dolejšová T, Sokol A, Bosák J, Šmajs D, Konopásek I, Mikušová G, Fišer R.

J Bacteriol. 2019 Sep 23. pii: JB.00493-19. doi: 10.1128/JB.00493-19. [Epub ahead of print]

PMID:
31548276
3.

Bacterial but Not Fungal Gut Microbiota Alterations Are Associated With Common Variable Immunodeficiency (CVID) Phenotype.

Fiedorová K, Radvanský M, Bosák J, Grombiříková H, Němcová E, Králíčková P, Černochová M, Kotásková I, Lexa M, Litzman J, Šmajs D, Freiberger T.

Front Immunol. 2019 Aug 13;10:1914. doi: 10.3389/fimmu.2019.01914. eCollection 2019.

4.

Directly Sequenced Genomes of Contemporary Strains of Syphilis Reveal Recombination-Driven Diversity in Genes Encoding Predicted Surface-Exposed Antigens.

Grillová L, Oppelt J, Mikalová L, Nováková M, Giacani L, Niesnerová A, Noda AA, Mechaly AE, Pospíšilová P, Čejková D, Grange PA, Dupin N, Strnadel R, Chen M, Denham I, Arora N, Picardeau M, Weston C, Forsyth RA, Šmajs D.

Front Microbiol. 2019 Jul 31;10:1691. doi: 10.3389/fmicb.2019.01691. eCollection 2019.

5.

Colicin Z, a structurally and functionally novel colicin type that selectively kills enteroinvasive Escherichia coli and Shigella strains.

Micenková L, Bosák J, Kucera J, Hrala M, Dolejšová T, Šedo O, Linke D, Fišer R, Šmajs D.

Sci Rep. 2019 Jul 31;9(1):11127. doi: 10.1038/s41598-019-47488-8.

6.

Identification of positively selected genes in human pathogenic treponemes: Syphilis-, yaws-, and bejel-causing strains differ in sets of genes showing adaptive evolution.

Maděránková D, Mikalová L, Strouhal M, Vadják Š, Kuklová I, Pospíšilová P, Krbková L, Koščová P, Provazník I, Šmajs D.

PLoS Negl Trop Dis. 2019 Jun 19;13(6):e0007463. doi: 10.1371/journal.pntd.0007463. eCollection 2019 Jun.

7.

MLST typing of Treponema pallidum subsp. pallidum in the Czech Republic during 2004-2017: Clinical isolates belonged to 25 allelic profiles and harbored 8 novel allelic variants.

Vrbová E, Grillová L, Mikalová L, Pospíšilová P, Strnadel R, Dastychová E, Kojanová M, Kreidlová M, Vaňousová D, Rob F, Procházka P, Krchňáková A, Vašků V, Woznicová V, Dvořáková Heroldová M, Kuklová I, Zákoucká H, Šmajs D.

PLoS One. 2019 May 31;14(5):e0217611. doi: 10.1371/journal.pone.0217611. eCollection 2019.

8.

Administration of the Probiotic Escherichia coli Strain A0 34/86 Resulted in a Stable Colonization of the Human Intestine During the First Year of Life.

Micenková L, Bosák J, Smatana S, Novotný A, Budinská E, Šmajs D.

Probiotics Antimicrob Proteins. 2019 May 8. doi: 10.1007/s12602-019-09548-3. [Epub ahead of print]

PMID:
31069717
9.

The Impact of DNA Extraction Methods on Stool Bacterial and Fungal Microbiota Community Recovery.

Fiedorová K, Radvanský M, Němcová E, Grombiříková H, Bosák J, Černochová M, Lexa M, Šmajs D, Freiberger T.

Front Microbiol. 2019 Apr 17;10:821. doi: 10.3389/fmicb.2019.00821. eCollection 2019.

10.

Porcine pathogenic Escherichia coli strains differ from human fecal strains in occurrence of bacteriocin types.

Bosák J, Hrala M, Pirková V, Micenková L, Čížek A, Smola J, Kučerová D, Vacková Z, Budinská E, Koláčková I, Šmajs D.

Vet Microbiol. 2019 May;232:121-127. doi: 10.1016/j.vetmic.2019.04.003. Epub 2019 Apr 6.

PMID:
31030835
11.

Fibroblast growth factor receptor influences primary cilium length through an interaction with intestinal cell kinase.

Kunova Bosakova M, Nita A, Gregor T, Varecha M, Gudernova I, Fafilek B, Barta T, Basheer N, Abraham SP, Balek L, Tomanova M, Fialova Kucerova J, Bosak J, Potesil D, Zieba J, Song J, Konik P, Park S, Duran I, Zdrahal Z, Smajs D, Jansen G, Fu Z, Ko HW, Hampl A, Trantirek L, Krakow D, Krejci P.

Proc Natl Acad Sci U S A. 2019 Feb 19. pii: 201800338. doi: 10.1073/pnas.1800338116. [Epub ahead of print]

12.

Genetic Stability of the Typing Loci Used in the Multilocus Sequence Typing and Enhanced CDC Typing of Syphilis Treponemes.

Grillová L, Šmajs D.

Sex Transm Dis. 2019 Jun;46(6):e70. doi: 10.1097/OLQ.0000000000000981. No abstract available.

PMID:
30720673
13.

A public database for the new MLST scheme for Treponema pallidum subsp. pallidum: surveillance and epidemiology of the causative agent of syphilis.

Grillova L, Jolley K, Šmajs D, Picardeau M.

PeerJ. 2019 Jan 9;6:e6182. doi: 10.7717/peerj.6182. eCollection 2019.

14.

Multilocus Sequence Typing of Treponema pallidum subsp. pallidum in Cuba From 2012 to 2017.

Grillová L, Noda AA, Lienhard R, Blanco O, Rodríguez I, Šmajs D.

J Infect Dis. 2019 Mar 15;219(7):1138-1145. doi: 10.1093/infdis/jiy604.

PMID:
30325448
15.

Complete genome sequences of two strains of Treponema pallidum subsp. pertenue from Indonesia: Modular structure of several treponemal genes.

Strouhal M, Mikalová L, Haviernik J, Knauf S, Bruisten S, Noordhoek GT, Oppelt J, Čejková D, Šmajs D.

PLoS Negl Trop Dis. 2018 Oct 10;12(10):e0006867. doi: 10.1371/journal.pntd.0006867. eCollection 2018 Oct.

16.

Nonhuman primates across sub-Saharan Africa are infected with the yaws bacterium Treponema pallidum subsp. pertenue.

Knauf S, Gogarten JF, Schuenemann VJ, De Nys HM, Düx A, Strouhal M, Mikalová L, Bos KI, Armstrong R, Batamuzi EK, Chuma IS, Davoust B, Diatta G, Fyumagwa RD, Kazwala RR, Keyyu JD, Lejora IAV, Levasseur A, Liu H, Mayhew MA, Mediannikov O, Raoult D, Wittig RM, Roos C, Leendertz FH, Šmajs D, Nieselt K, Krause J, Calvignac-Spencer S.

Emerg Microbes Infect. 2018 Sep 19;7(1):157. doi: 10.1038/s41426-018-0156-4. No abstract available.

17.

Sequencing of Treponema pallidum subsp. pallidum from isolate UZ1974 using Anti-Treponemal Antibodies Enrichment: First complete whole genome sequence obtained directly from human clinical material.

Grillová L, Giacani L, Mikalová L, Strouhal M, Strnadel R, Marra C, Centurion-Lara A, Poveda L, Russo G, Čejková D, Vašků V, Oppelt J, Šmajs D.

PLoS One. 2018 Aug 21;13(8):e0202619. doi: 10.1371/journal.pone.0202619. eCollection 2018.

18.

Colicin FY inhibits pathogenic Yersinia enterocolitica in mice.

Bosák J, Micenková L, Hrala M, Pomorská K, Kunova Bosakova M, Krejci P, Göpfert E, Faldyna M, Šmajs D.

Sci Rep. 2018 Aug 16;8(1):12242. doi: 10.1038/s41598-018-30729-7.

19.

Molecular characterization of Treponema pallidum subsp. pallidum in Switzerland and France with a new multilocus sequence typing scheme.

Grillová L, Bawa T, Mikalová L, Gayet-Ageron A, Nieselt K, Strouhal M, Sednaoui P, Ferry T, Cavassini M, Lautenschlager S, Dutly F, Pla-Díaz M, Krützen M, González-Candelas F, Bagheri HC, Šmajs D, Arora N, Bosshard PP.

PLoS One. 2018 Jul 30;13(7):e0200773. doi: 10.1371/journal.pone.0200773. eCollection 2018.

20.

Multi-locus sequence typing of Treponema pallidum subsp. pallidum present in clinical samples from France: Infecting treponemes are genetically diverse and belong to 18 allelic profiles.

Pospíšilová P, Grange PA, Grillová L, Mikalová L, Martinet P, Janier M, Vermersch A, Benhaddou N, Del Giudice P, Alcaraz I, Truchetet F, Dupin N, Šmajs D.

PLoS One. 2018 Jul 19;13(7):e0201068. doi: 10.1371/journal.pone.0201068. eCollection 2018.

21.

Sequence Variation of Rare Outer Membrane Protein β-Barrel Domains in Clinical Strains Provides Insights into the Evolution of Treponema pallidum subsp. pallidum, the Syphilis Spirochete.

Kumar S, Caimano MJ, Anand A, Dey A, Hawley KL, LeDoyt ME, La Vake CJ, Cruz AR, Ramirez LG, Paštěková L, Bezsonova I, Šmajs D, Salazar JC, Radolf JD.

MBio. 2018 Jun 12;9(3). pii: e01006-18. doi: 10.1128/mBio.01006-18.

22.

Escherichia coli isolates from patients with inflammatory bowel disease: ExPEC virulence- and colicin-determinants are more frequent compared to healthy controls.

Micenková L, Frankovičová L, Jaborníková I, Bosák J, Dítě P, Šmarda J, Vrba M, Ševčíková A, Kmeťová M, Šmajs D.

Int J Med Microbiol. 2018 Jul;308(5):498-504. doi: 10.1016/j.ijmm.2018.04.008. Epub 2018 May 1.

PMID:
29735381
23.

Gene target selection for loop-mediated isothermal amplification for rapid discrimination of Treponema pallidum subspecies.

Knauf S, Lüert S, Šmajs D, Strouhal M, Chuma IS, Frischmann S, Bakheit M.

PLoS Negl Trop Dis. 2018 Apr 12;12(4):e0006396. doi: 10.1371/journal.pntd.0006396. eCollection 2018 Apr.

24.

Genetics of human and animal uncultivable treponemal pathogens.

Šmajs D, Strouhal M, Knauf S.

Infect Genet Evol. 2018 Jul;61:92-107. doi: 10.1016/j.meegid.2018.03.015. Epub 2018 Mar 22. Review.

PMID:
29578082
25.

Low-dose versus standard-dose azithromycin for treatment of yaws.

Mikalová L, Šmajs D.

Lancet Glob Health. 2018 Apr;6(4):e357-e358. doi: 10.1016/S2214-109X(18)30067-6. Epub 2018 Feb 16. No abstract available.

26.

Bejel in Cuba: molecular identification of Treponema pallidum subsp. endemicum in patients diagnosed with venereal syphilis.

Noda AA, Grillová L, Lienhard R, Blanco O, Rodríguez I, Šmajs D.

Clin Microbiol Infect. 2018 Nov;24(11):1210.e1-1210.e5. doi: 10.1016/j.cmi.2018.02.006. Epub 2018 Feb 16.

PMID:
29454847
27.

Macrolide resistance in yaws.

Šmajs D, Pospíšilová P.

Lancet. 2018 Apr 21;391(10130):1555-1556. doi: 10.1016/S0140-6736(18)30205-8. Epub 2018 Feb 7. No abstract available.

PMID:
29428184
28.

Isolated populations of Ixodes lividus ticks in the Czech Republic and Belgium host genetically homogeneous Rickettsia vini.

Nováková M, Heneberg P, Heylen DJA, Medvecký M, Muñoz-Leal S, Šmajs D, Literák I.

Ticks Tick Borne Dis. 2018 Mar;9(3):479-484. doi: 10.1016/j.ttbdis.2017.12.018. Epub 2018 Jan 11.

PMID:
29373306
29.

Reanalysis of Chinese Treponema pallidum samples: all Chinese samples cluster with SS14-like group of syphilis-causing treponemes.

Strouhal M, Oppelt J, Mikalová L, Arora N, Nieselt K, González-Candelas F, Šmajs D.

BMC Res Notes. 2018 Jan 11;11(1):16. doi: 10.1186/s13104-017-3106-7.

30.

Characterization of four Escherichia albertii isolates collected from animals living in Antarctica and Patagonia.

Grillová L, Sedláček I, Páchníková G, Staňková E, Švec P, Holochová P, Micenková L, Bosák J, Slaninová I, Šmajs D.

J Vet Med Sci. 2018 Feb 2;80(1):138-146. doi: 10.1292/jvms.17-0492. Epub 2017 Dec 15.

31.

Complete genome sequences of two strains of Treponema pallidum subsp. pertenue from Ghana, Africa: Identical genome sequences in samples isolated more than 7 years apart.

Strouhal M, Mikalová L, Havlíčková P, Tenti P, Čejková D, Rychlík I, Bruisten S, Šmajs D.

PLoS Negl Trop Dis. 2017 Sep 8;11(9):e0005894. doi: 10.1371/journal.pntd.0005894. eCollection 2017 Sep.

32.

Molecular Typing of Syphilis-Causing Strains Among Human Immunodeficiency Virus-Positive Patients in Antwerp, Belgium.

Mikalová L, Grillová L, Osbak K, Strouhal M, Kenyon C, Crucitti T, Šmajs D.

Sex Transm Dis. 2017 Jun;44(6):376-379. doi: 10.1097/OLQ.0000000000000600.

PMID:
28499290
33.

Complete Genome Sequence of Bacteriophage SEN8, a Temperate Phage Isolated from Salmonella enterica subsp. salamae.

Bosák J, Mikalová L, Čejková D, Šmarda J, Šmajs D.

Genome Announc. 2017 May 11;5(19). pii: e00239-17. doi: 10.1128/genomeA.00239-17.

34.

Free-Living Enterobacterium Pragia fontium 24613: Complete Genome Sequence and Metabolic Profiling.

Snopková K, Sedlář K, Bosák J, Chaloupková E, Sedláček I, Provazník I, Šmajs D.

Evol Bioinform Online. 2017 Mar 30;13:1176934317700863. doi: 10.1177/1176934317700863. eCollection 2017.

35.

Human Escherichia coli isolates from hemocultures: Septicemia linked to urogenital tract infections is caused by isolates harboring more virulence genes than bacteraemia linked to other conditions.

Micenková L, Beňová A, Frankovičová L, Bosák J, Vrba M, Ševčíková A, Kmeťová M, Šmajs D.

Int J Med Microbiol. 2017 Apr;307(3):182-189. doi: 10.1016/j.ijmm.2017.02.003. Epub 2017 Feb 27.

PMID:
28268063
36.

Human Treponema pallidum 11q/j isolate belongs to subsp. endemicum but contains two loci with a sequence in TP0548 and TP0488 similar to subsp. pertenue and subsp. pallidum, respectively.

Mikalová L, Strouhal M, Oppelt J, Grange PA, Janier M, Benhaddou N, Dupin N, Šmajs D.

PLoS Negl Trop Dis. 2017 Mar 6;11(3):e0005434. doi: 10.1371/journal.pntd.0005434. eCollection 2017 Mar.

37.

Molecular typing of Treponema pallidum isolates from Buenos Aires, Argentina: Frequent Nichols-like isolates and low levels of macrolide resistance.

Gallo Vaulet L, Grillová L, Mikalová L, Casco R, Rodríguez Fermepin M, Pando MA, Šmajs D.

PLoS One. 2017 Feb 24;12(2):e0172905. doi: 10.1371/journal.pone.0172905. eCollection 2017.

38.

Novel Temperate Phages of Salmonella enterica subsp. salamae and subsp. diarizonae and Their Activity against Pathogenic S. enterica subsp. enterica Isolates.

Mikalová L, Bosák J, Hříbková H, Dědičová D, Benada O, Šmarda J, Šmajs D.

PLoS One. 2017 Jan 24;12(1):e0170734. doi: 10.1371/journal.pone.0170734. eCollection 2017.

39.

Origin of modern syphilis and emergence of a pandemic Treponema pallidum cluster.

Arora N, Schuenemann VJ, Jäger G, Peltzer A, Seitz A, Herbig A, Strouhal M, Grillová L, Sánchez-Busó L, Kühnert D, Bos KI, Davis LR, Mikalová L, Bruisten S, Komericki P, French P, Grant PR, Pando MA, Vaulet LG, Fermepin MR, Martinez A, Centurion Lara A, Giacani L, Norris SJ, Šmajs D, Bosshard PP, González-Candelas F, Nieselt K, Krause J, Bagheri HC.

Nat Microbiol. 2016 Dec 5;2:16245. doi: 10.1038/nmicrobiol.2016.245.

40.

Treponema pallidum, the syphilis spirochete: making a living as a stealth pathogen.

Radolf JD, Deka RK, Anand A, Šmajs D, Norgard MV, Yang XF.

Nat Rev Microbiol. 2016 Dec;14(12):744-759. doi: 10.1038/nrmicro.2016.141. Epub 2016 Oct 10. Review.

41.

Colicins U and Y inhibit growth of Escherichia coli strains via recognition of conserved OmpA extracellular loop 1.

Bosák J, Micenková L, Doležalová M, Šmajs D.

Int J Med Microbiol. 2016 Nov;306(7):486-494. doi: 10.1016/j.ijmm.2016.07.002. Epub 2016 Aug 2.

PMID:
27510856
42.

Human extraintestinal pathogenic Escherichia coli strains differ in prevalence of virulence factors, phylogroups, and bacteriocin determinants.

Micenková L, Bosák J, Vrba M, Ševčíková A, Šmajs D.

BMC Microbiol. 2016 Sep 20;16:218. doi: 10.1186/s12866-016-0835-z.

43.

Characterizing the Syphilis-Causing Treponema pallidum ssp. pallidum Proteome Using Complementary Mass Spectrometry.

Osbak KK, Houston S, Lithgow KV, Meehan CJ, Strouhal M, Šmajs D, Cameron CE, Van Ostade X, Kenyon CR, Van Raemdonck GA.

PLoS Negl Trop Dis. 2016 Sep 8;10(9):e0004988. doi: 10.1371/journal.pntd.0004988. eCollection 2016 Sep.

44.

Isolation of Treponema DNA from Necrophagous Flies in a Natural Ecosystem.

Knauf S, Raphael J, Mitjà O, Lejora IAV, Chuma IS, Batamuzi EK, Keyyu JD, Fyumagwa R, Lüert S, Godornes C, Liu H, Schwarz C, Šmajs D, Grange P, Zinner D, Roos C, Lukehart SA.

EBioMedicine. 2016 Sep;11:85-90. doi: 10.1016/j.ebiom.2016.07.033. Epub 2016 Jul 28.

45.

Treponema pallidum 11qj Subtype May Correspond to a Treponema pallidum Subsp. Endemicum Strain.

Grange PA, Mikalová L, Gaudin C, Strouhal M, Janier M, Benhaddou N, Šmajs D, Dupin N.

Sex Transm Dis. 2016 Aug;43(8):517-8. doi: 10.1097/OLQ.0000000000000474. No abstract available.

PMID:
27419817
46.

Microcin determinants are associated with B2 phylogroup of human fecal Escherichia coli isolates.

Micenková L, Bosák J, Štaudová B, Kohoutová D, Čejková D, Woznicová V, Vrba M, Ševčíková A, Bureš J, Šmajs D.

Microbiologyopen. 2016 Jun;5(3):490-8. doi: 10.1002/mbo3.345. Epub 2016 Mar 14.

47.

Determinants encoding fimbriae type 1 in fecal Escherichia coli are associated with increased frequency of bacteriocinogeny.

Štaudová B, Micenková L, Bosák J, Hrazdilová K, Slaninková E, Vrba M, Ševčíková A, Kohoutová D, Woznicová V, Bureš J, Šmajs D.

BMC Microbiol. 2015 Oct 6;15:201. doi: 10.1186/s12866-015-0530-5.

48.

A Retrospective Study on Genetic Heterogeneity within Treponema Strains: Subpopulations Are Genetically Distinct in a Limited Number of Positions.

Čejková D, Strouhal M, Norris SJ, Weinstock GM, Šmajs D.

PLoS Negl Trop Dis. 2015 Oct 5;9(10):e0004110. doi: 10.1371/journal.pntd.0004110. eCollection 2015.

49.

Macrolide Resistance in the Syphilis Spirochete, Treponema pallidum ssp. pallidum: Can We Also Expect Macrolide-Resistant Yaws Strains?

Šmajs D, Paštěková L, Grillová L.

Am J Trop Med Hyg. 2015 Oct;93(4):678-83. doi: 10.4269/ajtmh.15-0316. Epub 2015 Jul 27.

50.

Complete Genome Sequence of Pragia fontium 24613, an Environmental Bacterium from the Family Enterobacteriaceae.

Snopková K, Sedlář K, Bosák J, Chaloupková E, Provazník I, Šmajs D.

Genome Announc. 2015 Jul 9;3(4). pii: e00740-15. doi: 10.1128/genomeA.00740-15.

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