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Lumbar muscle and vertebral bodies segmentation of chemical shift encoding-based water-fat MRI: the reference database MyoSegmenTUM spine.

Burian E, Rohrmeier A, Schlaeger S, Dieckmeyer M, Diefenbach MN, Syväri J, Klupp E, Weidlich D, Zimmer C, Rummeny EJ, Karampinos DC, Kirschke JS, Baum T.

BMC Musculoskelet Disord. 2019 Apr 9;20(1):152. doi: 10.1186/s12891-019-2528-x.


T2 mapping of lumbosacral nerves in patients suffering from unilateral radicular pain due to degenerative disc disease.

Sollmann N, Weidlich D, Cervantes B, Klupp E, Ganter C, Kooijman H, Zimmer C, Rummeny EJ, Meyer B, Baum T, Kirschke JS, Karampinos DC.

J Neurosurg Spine. 2019 Feb 22:1-9. doi: 10.3171/2018.10.SPINE181172. [Epub ahead of print]


3D grating-based X-ray phase-contrast computed tomography for high-resolution quantitative assessment of cartilage: An experimental feasibility study with 3T MRI, 7T MRI and biomechanical correlation.

Herzen J, Karampinos DC, Foehr P, Birnbacher L, Viermetz M, Burgkart R, Baum T, Lohoefer F, Wildgruber M, Schilling F, Willner M, Marschner M, Noël PB, Rummeny EJ, Pfeiffer F, Jungmann PM.

PLoS One. 2019 Feb 14;14(2):e0212106. doi: 10.1371/journal.pone.0212106. eCollection 2019.


Paraspinal Muscle DTI Metrics Predict Muscle Strength.

Klupp E, Cervantes B, Schlaeger S, Inhuber S, Kreuzpointer F, Schwirtz A, Rohrmeier A, Dieckmeyer M, Hedderich DM, Diefenbach MN, Freitag F, Rummeny EJ, Zimmer C, Kirschke JS, Karampinos DC, Baum T.

J Magn Reson Imaging. 2019 Feb 5. doi: 10.1002/jmri.26679. [Epub ahead of print]


Exploration of New Contrasts, Targets, and MR Imaging and Spectroscopy Techniques for Neuromuscular Disease - A Workshop Report of Working Group 3 of the Biomedicine and Molecular Biosciences COST Action BM1304 MYO-MRI.

Strijkers GJ, Araujo ECA, Azzabou N, Bendahan D, Blamire A, Burakiewicz J, Carlier PG, Damon B, Deligianni X, Froeling M, Heerschap A, Hollingsworth KG, Hooijmans MT, Karampinos DC, Loudos G, Madelin G, Marty B, Nagel AM, Nederveen AJ, Nelissen JL, Santini F, Scheidegger O, Schick F, Sinclair C, Sinkus R, de Sousa PL, Straub V, Walter G, Kan HE.

J Neuromuscul Dis. 2019;6(1):1-30. doi: 10.3233/JND-180333.


Differentiating supraclavicular from gluteal adipose tissue based on simultaneous PDFF and T2 * mapping using a 20-echo gradient-echo acquisition.

Franz D, Diefenbach MN, Treibel F, Weidlich D, Syväri J, Ruschke S, Wu M, Holzapfel C, Drabsch T, Baum T, Eggers H, Rummeny EJ, Hauner H, Karampinos DC.

J Magn Reson Imaging. 2019 Jan 25. doi: 10.1002/jmri.26661. [Epub ahead of print]


Quantitative magnetic resonance imaging of the upper trapezius muscles - assessment of myofascial trigger points in patients with migraine.

Sollmann N, Mathonia N, Weidlich D, Bonfert M, Schroeder SA, Badura KA, Renner T, Trepte-Freisleder F, Ganter C, Krieg SM, Zimmer C, Rummeny EJ, Karampinos DC, Baum T, Landgraf MN, Heinen F.

J Headache Pain. 2019 Jan 18;20(1):8. doi: 10.1186/s10194-019-0960-9.


Measuring large lipid droplet sizes by probing restricted lipid diffusion effects with diffusion-weighted MRS at 3T.

Weidlich D, Honecker J, Gmach O, Wu M, Burgkart R, Ruschke S, Franz D, Menze BH, Skurk T, Hauner H, Kulozik U, Karampinos DC.

Magn Reson Med. 2019 Jun;81(6):3427-3439. doi: 10.1002/mrm.27651. Epub 2019 Jan 16.


Gender- and Age-Related Changes in Trunk Muscle Composition Using Chemical Shift Encoding-Based Water⁻Fat MRI.

Burian E, Syväri J, Holzapfel C, Drabsch T, Kirschke JS, Rummeny EJ, Zimmer C, Hauner H, Karampinos DC, Baum T, Franz D.

Nutrients. 2018 Dec 13;10(12). pii: E1972. doi: 10.3390/nu10121972.


Automated assessment of paraspinal muscle fat composition based on the segmentation of chemical shift encoding-based water/fat-separated images.

Baum T, Lorenz C, Buerger C, Freitag F, Dieckmeyer M, Eggers H, Zimmer C, Karampinos DC, Kirschke JS.

Eur Radiol Exp. 2018 Nov 7;2(1):32. doi: 10.1186/s41747-018-0065-2.


Associations Between Lumbar Vertebral Bone Marrow and Paraspinal Muscle Fat Compositions-An Investigation by Chemical Shift Encoding-Based Water-Fat MRI.

Sollmann N, Dieckmeyer M, Schlaeger S, Rohrmeier A, Syvaeri J, Diefenbach MN, Weidlich D, Ruschke S, Klupp E, Franz D, Rummeny EJ, Zimmer C, Kirschke JS, Karampinos DC, Baum T.

Front Endocrinol (Lausanne). 2018 Sep 28;9:563. doi: 10.3389/fendo.2018.00563. eCollection 2018.


On the sensitivity of quantitative susceptibility mapping for measuring trabecular bone density.

Diefenbach MN, Meineke J, Ruschke S, Baum T, Gersing A, Karampinos DC.

Magn Reson Med. 2019 Mar;81(3):1739-1754. doi: 10.1002/mrm.27531. Epub 2018 Sep 28.


Techniques and Applications of Magnetic Resonance Imaging for Studying Brown Adipose Tissue Morphometry and Function.

Karampinos DC, Weidlich D, Wu M, Hu HH, Franz D.

Handb Exp Pharmacol. 2019;251:299-324. doi: 10.1007/164_2018_158.


Improved Brachial Plexus Visualization Using an Adiabatic iMSDE-Prepared STIR 3D TSE.

Klupp E, Cervantes B, Sollmann N, Treibel F, Weidlich D, Baum T, Rummeny EJ, Zimmer C, Kirschke JS, Karampinos DC.

Clin Neuroradiol. 2018 Jul 23. doi: 10.1007/s00062-018-0706-0. [Epub ahead of print]


Association of paraspinal muscle water-fat MRI-based measurements with isometric strength measurements.

Schlaeger S, Inhuber S, Rohrmeier A, Dieckmeyer M, Freitag F, Klupp E, Weidlich D, Feuerriegel G, Kreuzpointner F, Schwirtz A, Rummeny EJ, Zimmer C, Kirschke JS, Karampinos DC, Baum T.

Eur Radiol. 2019 Feb;29(2):599-608. doi: 10.1007/s00330-018-5631-8. Epub 2018 Jul 16.


Thigh muscle segmentation of chemical shift encoding-based water-fat magnetic resonance images: The reference database MyoSegmenTUM.

Schlaeger S, Freitag F, Klupp E, Dieckmeyer M, Weidlich D, Inhuber S, Deschauer M, Schoser B, Bublitz S, Montagnese F, Zimmer C, Rummeny EJ, Karampinos DC, Kirschke JS, Baum T.

PLoS One. 2018 Jun 7;13(6):e0198200. doi: 10.1371/journal.pone.0198200. eCollection 2018.


Magnetic Resonance Imaging of Adipose Tissue in Metabolic Dysfunction.

Franz D, Syväri J, Weidlich D, Baum T, Rummeny EJ, Karampinos DC.

Rofo. 2018 Dec;190(12):1121-1130. doi: 10.1055/a-0612-8006. Epub 2018 Jun 6. Review.


Anatomical Variation of Age-Related Changes in Vertebral Bone Marrow Composition Using Chemical Shift Encoding-Based Water-Fat Magnetic Resonance Imaging.

Baum T, Rohrmeier A, Syväri J, Diefenbach MN, Franz D, Dieckmeyer M, Scharr A, Hauner H, Ruschke S, Kirschke JS, Karampinos DC.

Front Endocrinol (Lausanne). 2018 Apr 4;9:141. doi: 10.3389/fendo.2018.00141. eCollection 2018.


T2-Weighted Dixon Turbo Spin Echo for Accelerated Simultaneous Grading of Whole-Body Skeletal Muscle Fat Infiltration and Edema in Patients With Neuromuscular Diseases.

Schlaeger S, Klupp E, Weidlich D, Cervantes B, Foreman SC, Deschauer M, Schoser B, Katemann C, Kooijman H, Rummeny EJ, Zimmer C, Kirschke JS, Karampinos DC.

J Comput Assist Tomogr. 2018 Jul/Aug;42(4):574-579. doi: 10.1097/RCT.0000000000000723.


Non-invasive Measurement of Brown Fat Metabolism Based on Optoacoustic Imaging of Hemoglobin Gradients.

Reber J, Willershäuser M, Karlas A, Paul-Yuan K, Diot G, Franz D, Fromme T, Ovsepian SV, Bézière N, Dubikovskaya E, Karampinos DC, Holzapfel C, Hauner H, Klingenspor M, Ntziachristos V.

Cell Metab. 2018 Mar 6;27(3):689-701.e4. doi: 10.1016/j.cmet.2018.02.002.


Improving chemical shift encoding-based water-fat separation based on a detailed consideration of magnetic field contributions.

Diefenbach MN, Ruschke S, Eggers H, Meineke J, Rummeny EJ, Karampinos DC.

Magn Reson Med. 2018 Sep;80(3):990-1004. doi: 10.1002/mrm.27097. Epub 2018 Feb 9. No abstract available.


Isotropic resolution diffusion tensor imaging of lumbosacral and sciatic nerves using a phase-corrected diffusion-prepared 3D turbo spin echo.

Cervantes B, Van AT, Weidlich D, Kooijman H, Hock A, Rummeny EJ, Gersing A, Kirschke JS, Karampinos DC.

Magn Reson Med. 2018 Aug;80(2):609-618. doi: 10.1002/mrm.27072. Epub 2018 Jan 29.


High Isotropic Resolution T2 Mapping of the Lumbosacral Plexus with T2-Prepared 3D Turbo Spin Echo.

Sollmann N, Weidlich D, Cervantes B, Klupp E, Ganter C, Kooijman H, Rummeny EJ, Zimmer C, Kirschke JS, Karampinos DC.

Clin Neuroradiol. 2018 Jan 10. doi: 10.1007/s00062-017-0658-9. [Epub ahead of print]


T2 mapping with magnetization-prepared 3D TSE based on a modified BIR-4 T2 preparation.

Weidlich D, Schlaeger S, Kooijman H, Börnert P, Kirschke JS, Rummeny EJ, Haase A, Karampinos DC.

NMR Biomed. 2017 Nov;30(11). doi: 10.1002/nbm.3773. Epub 2017 Aug 4.


Quantitative MRI and spectroscopy of bone marrow.

Karampinos DC, Ruschke S, Dieckmeyer M, Diefenbach M, Franz D, Gersing AS, Krug R, Baum T.

J Magn Reson Imaging. 2018 Feb;47(2):332-353. doi: 10.1002/jmri.25769. Epub 2017 Jun 1. Review.


Analysis of phase error effects in multishot diffusion-prepared turbo spin echo imaging.

Van AT, Cervantes B, Kooijman H, Karampinos DC.

Quant Imaging Med Surg. 2017 Apr;7(2):238-250. doi: 10.21037/qims.2017.04.01.


Five-Year Outcomes After Treatment for Acute Instability of the Tibiofibular Syndesmosis Using a Suture-Button Fixation System.

Förschner PF, Beitzel K, Imhoff AB, Buchmann S, Feuerriegel G, Hofmann F, Karampinos DC, Jungmann P, Pogorzelski J.

Orthop J Sports Med. 2017 Apr 27;5(4):2325967117702854. doi: 10.1177/2325967117702854. eCollection 2017 Apr.


Proton Density Fat-Fraction of Rotator Cuff Muscles Is Associated With Isometric Strength 10 Years After Rotator Cuff Repair: A Quantitative Magnetic Resonance Imaging Study of the Shoulder.

Karampinos DC, Holwein C, Buchmann S, Baum T, Ruschke S, Gersing AS, Sutter R, Imhoff AB, Rummeny EJ, Jungmann PM.

Am J Sports Med. 2017 Jul;45(9):1990-1999. doi: 10.1177/0363546517703086. Epub 2017 May 1.


Measurement of vertebral bone marrow proton density fat fraction in children using quantitative water-fat MRI.

Ruschke S, Pokorney A, Baum T, Eggers H, Miller JH, Hu HH, Karampinos DC.

MAGMA. 2017 Oct;30(5):449-460. doi: 10.1007/s10334-017-0617-0. Epub 2017 Apr 5.


Orthogonally combined motion- and diffusion-sensitized driven equilibrium (OC-MDSDE) preparation for vessel signal suppression in 3D turbo spin echo imaging of peripheral nerves in the extremities.

Cervantes B, Kirschke JS, Klupp E, Kooijman H, Börnert P, Haase A, Rummeny EJ, Karampinos DC.

Magn Reson Med. 2018 Jan;79(1):407-415. doi: 10.1002/mrm.26660. Epub 2017 Mar 5.


B1-insensitive T2 mapping of healthy thigh muscles using a T2-prepared 3D TSE sequence.

Klupp E, Weidlich D, Schlaeger S, Baum T, Cervantes B, Deschauer M, Kooijman H, Rummeny EJ, Zimmer C, Kirschke JS, Karampinos DC.

PLoS One. 2017 Feb 14;12(2):e0171337. doi: 10.1371/journal.pone.0171337. eCollection 2017.


Two patients with GMPPB mutation: The overlapping phenotypes of limb-girdle myasthenic syndrome and limb-girdle muscular dystrophy dystroglycanopathy.

Montagnese F, Klupp E, Karampinos DC, Biskup S, Gläser D, Kirschke JS, Schoser B.

Muscle Nerve. 2017 Aug;56(2):334-340. doi: 10.1002/mus.25485. Epub 2017 Feb 23.


ADC Quantification of the Vertebral Bone Marrow Water Component: Removing the Confounding Effect of Residual Fat.

Dieckmeyer M, Ruschke S, Eggers H, Kooijman H, Rummeny EJ, Kirschke JS, Baum T, Karampinos DC.

Magn Reson Med. 2017 Oct;78(4):1432-1441. doi: 10.1002/mrm.26550. Epub 2016 Nov 8.


Correction of phase errors in quantitative water-fat imaging using a monopolar time-interleaved multi-echo gradient echo sequence.

Ruschke S, Eggers H, Kooijman H, Diefenbach MN, Baum T, Haase A, Rummeny EJ, Hu HH, Karampinos DC.

Magn Reson Med. 2017 Sep;78(3):984-996. doi: 10.1002/mrm.26485. Epub 2016 Oct 31.


Automatic segmentation of abdominal organs and adipose tissue compartments in water-fat MRI: Application to weight-loss in obesity.

Shen J, Baum T, Cordes C, Ott B, Skurk T, Kooijman H, Rummeny EJ, Hauner H, Menze BH, Karampinos DC.

Eur J Radiol. 2016 Sep;85(9):1613-21. doi: 10.1016/j.ejrad.2016.06.006. Epub 2016 Jun 8.


MR-Based Assessment of Bone Marrow Fat in Osteoporosis, Diabetes, and Obesity.

Cordes C, Baum T, Dieckmeyer M, Ruschke S, Diefenbach MN, Hauner H, Kirschke JS, Karampinos DC.

Front Endocrinol (Lausanne). 2016 Jun 27;7:74. doi: 10.3389/fendo.2016.00074. eCollection 2016. Review.


Use of MR-based trabecular bone microstructure analysis at the distal radius for osteoporosis diagnostics: a study in post-menopausal women with breast cancer and treated with aromatase inhibitor.

Baum T, Karampinos DC, Seifert-Klauss V, Pencheva TD, Jungmann PM, Rummeny EJ, Müller D, Bauer JS.

Clin Cases Miner Bone Metab. 2016 Jan-Apr;13(1):29-32. doi: 10.11138/ccmbm/2016.13.1.029. Epub 2016 May 11.


Reduction of the n-6:n-3 long-chain PUFA ratio during pregnancy and lactation on offspring body composition: follow-up results from a randomized controlled trial up to 5 y of age.

Brei C, Stecher L, Much D, Karla MT, Amann-Gassner U, Shen J, Ganter C, Karampinos DC, Brunner S, Hauner H.

Am J Clin Nutr. 2016 Jun;103(6):1472-81. doi: 10.3945/ajcn.115.128520. Epub 2016 Apr 6.


Association of Quadriceps Muscle Fat With Isometric Strength Measurements in Healthy Males Using Chemical Shift Encoding-Based Water-Fat Magnetic Resonance Imaging.

Baum T, Inhuber S, Dieckmeyer M, Cordes C, Ruschke S, Klupp E, Jungmann PM, Farlock R, Eggers H, Kooijman H, Rummeny EJ, Schwirtz A, Kirschke JS, Karampinos DC.

J Comput Assist Tomogr. 2016 May-Jun;40(3):447-51. doi: 10.1097/RCT.0000000000000374.


MR-based assessment of body fat distribution and characteristics.

Baum T, Cordes C, Dieckmeyer M, Ruschke S, Franz D, Hauner H, Kirschke JS, Karampinos DC.

Eur J Radiol. 2016 Aug;85(8):1512-8. doi: 10.1016/j.ejrad.2016.02.013. Epub 2016 Feb 12. Review.


Imaging of the lumbar plexus: Optimized refocusing flip angle train design for 3D TSE.

Cervantes B, Bauer JS, Zibold F, Kooijman H, Settles M, Haase A, Rummeny EJ, Wörtler K, Karampinos DC.

J Magn Reson Imaging. 2016 Apr;43(4):789-99. doi: 10.1002/jmri.25076. Epub 2015 Oct 10.


Modeling of T2* decay in vertebral bone marrow fat quantification.

Karampinos DC, Ruschke S, Dieckmeyer M, Eggers H, Kooijman H, Rummeny EJ, Bauer JS, Baum T.

NMR Biomed. 2015 Nov;28(11):1535-42. doi: 10.1002/nbm.3420. Epub 2015 Oct 1.


Discrimination Between Brown and White Adipose Tissue Using a 2-Point Dixon Water-Fat Separation Method in Simultaneous PET/MRI.

Franz D, Karampinos DC, Rummeny EJ, Souvatzoglou M, Beer AJ, Nekolla SG, Schwaiger M, Eiber M.

J Nucl Med. 2015 Nov;56(11):1742-7. doi: 10.2967/jnumed.115.160770. Epub 2015 Aug 13.


Spatial variations in magnetic resonance-based diffusion of articular cartilage in knee osteoarthritis.

Guha A, Wyatt C, Karampinos DC, Nardo L, Link TM, Majumdar S.

Magn Reson Imaging. 2015 Nov;33(9):1051-1058. doi: 10.1016/j.mri.2015.06.004. Epub 2015 Jun 26.


Association of MRS-Based Vertebral Bone Marrow Fat Fraction with Bone Strength in a Human In Vitro Model.

Karampinos DC, Ruschke S, Gordijenko O, Grande Garcia E, Kooijman H, Burgkart R, Rummeny EJ, Bauer JS, Baum T.

J Osteoporos. 2015;2015:152349. doi: 10.1155/2015/152349. Epub 2015 Apr 19.


MR-detected changes in liver fat, abdominal fat, and vertebral bone marrow fat after a four-week calorie restriction in obese women.

Cordes C, Dieckmeyer M, Ott B, Shen J, Ruschke S, Settles M, Eichhorn C, Bauer JS, Kooijman H, Rummeny EJ, Skurk T, Baum T, Hauner H, Karampinos DC.

J Magn Reson Imaging. 2015 Nov;42(5):1272-80. doi: 10.1002/jmri.24908. Epub 2015 Apr 9.


Diffusion-weighted stimulated echo acquisition mode (DW-STEAM) MR spectroscopy to measure fat unsaturation in regions with low proton-density fat fraction.

Ruschke S, Kienberger H, Baum T, Kooijman H, Settles M, Haase A, Rychlik M, Rummeny EJ, Karampinos DC.

Magn Reson Med. 2016 Jan;75(1):32-41. doi: 10.1002/mrm.25578. Epub 2015 Mar 5.


The need for T₂ correction on MRS-based vertebral bone marrow fat quantification: implications for bone marrow fat fraction age dependence.

Dieckmeyer M, Ruschke S, Cordes C, Yap SP, Kooijman H, Hauner H, Rummeny EJ, Bauer JS, Baum T, Karampinos DC.

NMR Biomed. 2015 Apr;28(4):432-9. doi: 10.1002/nbm.3267. Epub 2015 Feb 13.


Assessment of whole spine vertebral bone marrow fat using chemical shift-encoding based water-fat MRI.

Baum T, Yap SP, Dieckmeyer M, Ruschke S, Eggers H, Kooijman H, Rummeny EJ, Bauer JS, Karampinos DC.

J Magn Reson Imaging. 2015 Oct;42(4):1018-23. doi: 10.1002/jmri.24854. Epub 2015 Feb 2.


MR-based trabecular bone microstructure is not altered in subjects with indolent systemic mastocytosis.

Baum T, Karampinos DC, Brockow K, Seifert-Klauss V, Jungmann PM, Biedermann T, Rummeny EJ, Bauer JS, Müller D.

Clin Imaging. 2015 Sep-Oct;39(5):886-9. doi: 10.1016/j.clinimag.2014.12.006. Epub 2014 Dec 12.


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