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Items: 1 to 50 of 54

1.

Case of Microcephaly after Congenital Infection with Asian Lineage Zika Virus, Thailand.

Wongsurawat T, Athipanyasilp N, Jenjaroenpun P, Jun SR, Kaewnapan B, Wassenaar TM, Leelahakorn N, Angkasekwinai N, Kantakamalakul W, Ussery DW, Sutthent R, Nookaew I, Horthongkham N.

Emerg Infect Dis. 2018 Sep;24(9). doi: 10.3201/eid2409.180416. Epub 2018 Sep 17.

2.

E. coli and colorectal cancer: a complex relationship that deserves a critical mindset.

Wassenaar TM.

Crit Rev Microbiol. 2018 Sep;44(5):619-632. doi: 10.1080/1040841X.2018.1481013. Epub 2018 Jun 17.

PMID:
29909724
3.

Genome-Based Comparison of Clostridioides difficile: Average Amino Acid Identity Analysis of Core Genomes.

Cabal A, Jun SR, Jenjaroenpun P, Wanchai V, Nookaew I, Wongsurawat T, Burgess MJ, Kothari A, Wassenaar TM, Ussery DW.

Microb Ecol. 2018 Oct;76(3):801-813. doi: 10.1007/s00248-018-1155-7. Epub 2018 Feb 14.

4.

Suggested mechanisms for Zika virus causing microcephaly: what do the genomes tell us?

Jun SR, Wassenaar TM, Wanchai V, Patumcharoenpol P, Nookaew I, Ussery DW.

BMC Bioinformatics. 2017 Dec 28;18(Suppl 14):471. doi: 10.1186/s12859-017-1894-3.

5.

A secreted antibacterial neuropeptide shapes the microbiome of Hydra.

Augustin R, Schröder K, Murillo Rincón AP, Fraune S, Anton-Erxleben F, Herbst EM, Wittlieb J, Schwentner M, Grötzinger J, Wassenaar TM, Bosch TCG.

Nat Commun. 2017 Sep 26;8(1):698. doi: 10.1038/s41467-017-00625-1.

6.

Three Complete Genome Sequences of Genotype G Mumps Virus from the 2016 Outbreak in Arkansas, USA.

Alkam D, Wongsurawat T, Jenjaroenpun P, Connor S, Hobbs C, Wassenaar TM, Jun SR, Nookaew I, Ussery D.

Genome Announc. 2017 Aug 10;5(32). pii: e00555-17. doi: 10.1128/genomeA.00555-17.

7.

Insights from 100 Years of Research with Probiotic E. Coli.

Wassenaar TM.

Eur J Microbiol Immunol (Bp). 2016 Sep 29;6(3):147-161. eCollection 2016 Sep 29. Review.

8.
9.

Integrated MRSA-Management (IMM) with prolonged decolonization treatment after hospital discharge is effective: a single centre, non-randomised open-label trial.

Jahn B, Wassenaar TM, Stroh A.

Antimicrob Resist Infect Control. 2016 Jun 14;5:25. doi: 10.1186/s13756-016-0124-5. eCollection 2016.

10.

Diversity of Pseudomonas Genomes, Including Populus-Associated Isolates, as Revealed by Comparative Genome Analysis.

Jun SR, Wassenaar TM, Nookaew I, Hauser L, Wanchai V, Land M, Timm CM, Lu TY, Schadt CW, Doktycz MJ, Pelletier DA, Ussery DW.

Appl Environ Microbiol. 2015 Oct 30;82(1):375-83. doi: 10.1128/AEM.02612-15. Print 2016 Jan 1.

11.

Ebolavirus comparative genomics.

Jun SR, Leuze MR, Nookaew I, Uberbacher EC, Land M, Zhang Q, Wanchai V, Chai J, Nielsen M, Trolle T, Lund O, Buzard GS, Pedersen TD, Wassenaar TM, Ussery DW.

FEMS Microbiol Rev. 2015 Sep;39(5):764-78. doi: 10.1093/femsre/fuv031. Epub 2015 Jul 14. Review.

12.

The prediction of virulence based on presence of virulence genes in E. coli may not always be accurate.

Wassenaar TM, Gunzer F.

Gut Pathog. 2015 Jun 19;7:15. doi: 10.1186/s13099-015-0062-4. eCollection 2015.

13.

Virulence genes in a probiotic E. coli product with a recorded long history of safe use.

Wassenaar TM, Zschüttig A, Beimfohr C, Geske T, Auerbach C, Cook H, Zimmermann K, Gunzer F.

Eur J Microbiol Immunol (Bp). 2015 Mar;5(1):81-93. doi: 10.1556/EUJMI-D-14-00039. Epub 2015 Mar 26.

14.

Review and phylogenetic analysis of qac genes that reduce susceptibility to quaternary ammonium compounds in Staphylococcus species.

Wassenaar TM, Ussery D, Nielsen LN, Ingmer H.

Eur J Microbiol Immunol (Bp). 2015 Mar;5(1):44-61. doi: 10.1556/EUJMI-D-14-00038. Epub 2015 Mar 26. Review.

15.

Complete Sequence of Probiotic Symbioflor 2 Escherichia coli Strain G3/10 and Draft Sequences of Symbioflor 2 E. coli Strains G1/2, G4/9, G5, G6/7, and G8.

Zschüttig A, Auerbach C, Meltke S, Eichhorn C, Brandt M, Blom J, Goesmann A, Jarek M, Scharfe M, Zimmermann K, Wassenaar TM, Gunzer F.

Genome Announc. 2015 Mar 5;3(2). pii: e01330-14. doi: 10.1128/genomeA.01330-14.

16.

Method comparison for enhanced recovery, isolation and qualitative detection of C. jejuni and C. coli from wastewater effluent samples.

Ugarte-Ruiz M, Florez-Cuadrado D, Wassenaar TM, Porrero MC, Domínguez L.

Int J Environ Res Public Health. 2015 Mar 2;12(3):2749-64. doi: 10.3390/ijerph120302749.

17.

Veillonella, Firmicutes: Microbes disguised as Gram negatives.

Vesth T, Ozen A, Andersen SC, Kaas RS, Lukjancenko O, Bohlin J, Nookaew I, Wassenaar TM, Ussery DW.

Stand Genomic Sci. 2013 Dec 15;9(2):431-48. doi: 10.4056/sigs.2981345. eCollection 2013 Dec 20.

18.

Analysis of evolutionary patterns of genes in Campylobacter jejuni and C. coli.

Snipen L, Wassenaar TM, Altermann E, Olson J, Kathariou S, Lagesen K, Takamiya M, Knøchel S, Ussery DW, Meinersmann RJ.

Microb Inform Exp. 2012 Aug 28;2(1):8. doi: 10.1186/2042-5783-2-8.

19.

Comparative genomics of Bifidobacterium, Lactobacillus and related probiotic genera.

Lukjancenko O, Ussery DW, Wassenaar TM.

Microb Ecol. 2012 Apr;63(3):651-73. doi: 10.1007/s00248-011-9948-y. Epub 2011 Oct 27. Review.

20.

Genomic characterization of Campylobacter jejuni strain M1.

Friis C, Wassenaar TM, Javed MA, Snipen L, Lagesen K, Hallin PF, Newell DG, Toszeghy M, Ridley A, Manning G, Ussery DW.

PLoS One. 2010 Aug 26;5(8):e12253. doi: 10.1371/journal.pone.0012253.

21.

Comparison of 61 sequenced Escherichia coli genomes.

Lukjancenko O, Wassenaar TM, Ussery DW.

Microb Ecol. 2010 Nov;60(4):708-20. doi: 10.1007/s00248-010-9717-3. Epub 2010 Jul 11. Review.

22.

Genome update: the 1000th genome--a cautionary tale.

Lagesen K, Ussery DW, Wassenaar TM.

Microbiology. 2010 Mar;156(Pt 3):603-8. doi: 10.1099/mic.0.038257-0. Epub 2010 Jan 21.

PMID:
20093288
23.

On the origins of a Vibrio species.

Vesth T, Wassenaar TM, Hallin PF, Snipen L, Lagesen K, Ussery DW.

Microb Ecol. 2010 Jan;59(1):1-13. doi: 10.1007/s00248-009-9596-7.

24.

Antimicrobial resistance in zoonotic bacteria: lessons learned from host-specific pathogens.

Wassenaar TM, Silley P.

Anim Health Res Rev. 2008 Dec;9(2):177-86. doi: 10.1017/S1466252308001539. Review.

PMID:
19102789
25.

Safety aspects and implications of regulation of probiotic bacteria in food and food supplements.

Wassenaar TM, Klein G.

J Food Prot. 2008 Aug;71(8):1734-41. Review.

PMID:
18724773
26.

Putative identification of an amphipathic alpha-helical sequence in hemolysin of Escherichia coli (HlyA) involved in transmembrane pore formation.

Valeva A, Siegel I, Wylenzek M, Wassenaar TM, Weis S, Heinz N, Schmitt R, Fischer C, Reinartz R, Bhakdi S, Walev I.

Biol Chem. 2008 Sep;389(9):1201-7. doi: 10.1515/BC.2008.136.

PMID:
18713007
27.

Identification of hyperinvasive Campylobacter jejuni strains isolated from poultry and human clinical sources.

Fearnley C, Manning G, Bagnall M, Javed MA, Wassenaar TM, Newell DG.

J Med Microbiol. 2008 May;57(Pt 5):570-80. doi: 10.1099/jmm.0.47803-0.

PMID:
18436589
28.

Development of a strain-specific molecular method for quantitating individual campylobacter strains in mixed populations.

Elvers KT, Helps CR, Wassenaar TM, Allen VM, Newell DG.

Appl Environ Microbiol. 2008 Apr;74(8):2321-31. doi: 10.1128/AEM.02269-07. Epub 2008 Feb 15.

29.

Characterization of probiotic Escherichia coli isolates with a novel pan-genome microarray.

Willenbrock H, Hallin PF, Wassenaar TM, Ussery DW.

Genome Biol. 2007;8(12):R267.

30.

Pro-inflammatory feedback activation cycle evoked by attack of Vibrio cholerae cytolysin on human neutrophil granulocytes.

Valeva A, Walev I, Weis S, Boukhallouk F, Wassenaar TM, Bhakdi S.

Med Microbiol Immunol. 2008 Sep;197(3):285-93. Epub 2007 Sep 20.

PMID:
17882454
31.

Re-analysis of the risks attributed to ciprofloxacin-resistant Campylobacter jejuni infections.

Wassenaar TM, Kist M, de Jong A.

Int J Antimicrob Agents. 2007 Sep;30(3):195-201. Epub 2007 Apr 8. Review.

PMID:
17420115
32.

Ten years of bacterial genome sequencing: comparative-genomics-based discoveries.

Binnewies TT, Motro Y, Hallin PF, Lund O, Dunn D, La T, Hampson DJ, Bellgard M, Wassenaar TM, Ussery DW.

Funct Integr Genomics. 2006 Jul;6(3):165-85. Epub 2006 May 12. Review.

PMID:
16773396
33.

Genotyping of human and porcine Yersinia enterocolitica, Yersinia intermedia, and Yersinia bercovieri strains from Switzerland by amplified fragment length polymorphism analysis.

Boghenbor KK, On SL, Kokotovic B, Baumgartner A, Wassenaar TM, Wittwer M, Bissig-Choisat B, Frey J.

Appl Environ Microbiol. 2006 Jun;72(6):4061-6.

34.
35.

Genome update: sigma factors in 240 bacterial genomes.

Kill K, Binnewies TT, Sicheritz-Pontén T, Willenbrock H, Hallin PF, Wassenaar TM, Ussery DW.

Microbiology. 2005 Oct;151(Pt 10):3147-50. No abstract available.

PMID:
16207898
36.

Role of dprA in transformation of Campylobacter jejuni.

Takata T, Ando T, Israel DA, Wassenaar TM, Blaser MJ.

FEMS Microbiol Lett. 2005 Nov 1;252(1):161-8. Epub 2005 Sep 19.

37.

Use of antimicrobial agents in veterinary medicine and implications for human health.

Wassenaar TM.

Crit Rev Microbiol. 2005;31(3):155-69. Review.

PMID:
16170906
38.

Binding of Escherichia coli hemolysin and activation of the target cells is not receptor-dependent.

Valeva A, Walev I, Kemmer H, Weis S, Siegel I, Boukhallouk F, Wassenaar TM, Chavakis T, Bhakdi S.

J Biol Chem. 2005 Nov 4;280(44):36657-63. Epub 2005 Aug 30.

39.

Phage therapy reduces Campylobacter jejuni colonization in broilers.

Wagenaar JA, Van Bergen MA, Mueller MA, Wassenaar TM, Carlton RM.

Vet Microbiol. 2005 Aug 30;109(3-4):275-83.

PMID:
16024187
40.

Identification of the membrane penetrating domain of Vibrio cholerae cytolysin as a beta-barrel structure.

Valeva A, Walev I, Boukhallouk F, Wassenaar TM, Heinz N, Hedderich J, Lautwein S, Möcking M, Weis S, Zitzer A, Bhakdi S.

Mol Microbiol. 2005 Jul;57(1):124-31.

41.
42.

Genome Update: Protein secretion systems in 225 bacterial genomes.

Binnewies TT, Bendtsen JD, Hallin PF, Nielsen N, Wassenaar TM, Pedersen MB, Klemm P, Ussery DW.

Microbiology. 2005 Apr;151(Pt 4):1013-6. No abstract available.

PMID:
15817770
43.

Risk assessment prediction from genome sequences: promises and dreams.

Wassenaar TM.

J Food Prot. 2004 Sep;67(9):2053-7.

PMID:
15453601
44.

Genome update: tRNAs in sequenced microbial genomes.

Ussery DW, Hallin PF, Lagesen K, Wassenaar TM.

Microbiology. 2004 Jun;150(Pt 6):1603-6. No abstract available.

PMID:
15184546
45.

A cellular metalloproteinase activates Vibrio cholerae pro-cytolysin.

Valeva A, Walev I, Weis S, Boukhallouk F, Wassenaar TM, Endres K, Fahrenholz F, Bhakdi S, Zitzer A.

J Biol Chem. 2004 Jun 11;279(24):25143-8. Epub 2004 Apr 5.

46.

Molecular typing of pathogens.

Wassenaar TM.

Berl Munch Tierarztl Wochenschr. 2003 Nov-Dec;116(11-12):447-53. Review.

PMID:
14655621
47.

Structure and genotypic plasticity of the Campylobacter fetus sap locus.

Tu ZC, Wassenaar TM, Thompson SA, Blaser MJ.

Mol Microbiol. 2003 May;48(3):685-98.

48.

Evolutionary implications of microbial genome tetranucleotide frequency biases.

Pride DT, Meinersmann RJ, Wassenaar TM, Blaser MJ.

Genome Res. 2003 Feb;13(2):145-58.

49.

Genetic differentiation of Campylobacter jejuni.

Wassenaar TM.

Int J Infect Dis. 2002 Dec;6 Suppl 3:3S22-5; discussion 3S25, 3S53-8. Review.

50.

Homonucleotide stretches in chromosomal DNA of Campylobacter jejuni display high frequency polymorphism as detected by direct PCR analysis.

Wassenaar TM, Wagenaar JA, Rigter A, Fearnley C, Newell DG, Duim B.

FEMS Microbiol Lett. 2002 Jun 18;212(1):77-85.

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