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Items: 28

1.

Coupling Fluxes, Enzymes, and Regulation in Genome-Scale Metabolic Models.

Jensen PA.

Methods Mol Biol. 2018;1716:337-351. doi: 10.1007/978-1-4939-7528-0_15. Review.

PMID:
29222761
2.

Designing Randomized DNA Sequences Free of Restriction Enzyme Recognition Sites.

Storm AJ, Jensen PA.

Biotechnol J. 2018 Jan;13(1). doi: 10.1002/biot.201700326. Epub 2017 Oct 16.

PMID:
28865135
3.

Hands-On Assembly of DNA Sequencing Reads as a Gateway to Bioinformatics.

Jensen PA.

J Microbiol Biol Educ. 2017 Jun 9;18(2). pii: 18.2.34. doi: 10.1128/jmbe.v18i2.1295. eCollection 2017. No abstract available.

4.

Antibiotics Disrupt Coordination between Transcriptional and Phenotypic Stress Responses in Pathogenic Bacteria.

Jensen PA, Zhu Z, van Opijnen T.

Cell Rep. 2017 Aug 15;20(7):1705-1716. doi: 10.1016/j.celrep.2017.07.062.

5.

Institutional Tuberculosis Transmission. Controlled Trial of Upper Room Ultraviolet Air Disinfection: A Basis for New Dosing Guidelines.

Mphaphlele M, Dharmadhikari AS, Jensen PA, Rudnick SN, van Reenen TH, Pagano MA, Leuschner W, Sears TA, Milonova SP, van der Walt M, Stoltz AC, Weyer K, Nardell EA.

Am J Respir Crit Care Med. 2015 Aug 15;192(4):477-84. doi: 10.1164/rccm.201501-0060OC.

6.

Miniaturized plate readers for low-cost, high-throughput phenotypic screening.

Jensen PA, Dougherty BV, Moutinho TJ Jr, Papin JA.

J Lab Autom. 2015 Feb;20(1):51-5. doi: 10.1177/2211068214555414. Epub 2014 Nov 3.

7.

MetDraw: automated visualization of genome-scale metabolic network reconstructions and high-throughput data.

Jensen PA, Papin JA.

Bioinformatics. 2014 May 1;30(9):1327-8. doi: 10.1093/bioinformatics/btt758. Epub 2014 Jan 9.

8.

Performance evaluation of selected n95 respirators and surgical masks when challenged with aerosolized endospores and inert particles.

Davidson CS, Green CF, Gibbs SG, Schmid KK, Panlilio AL, Jensen PA, Scarpino PV.

J Occup Environ Hyg. 2013;10(9):461-7. doi: 10.1080/15459624.2013.818243.

PMID:
23915331
9.

Metabolic network analysis predicts efficacy of FDA-approved drugs targeting the causative agent of a neglected tropical disease.

Chavali AK, Blazier AS, Tlaxca JL, Jensen PA, Pearson RD, Papin JA.

BMC Syst Biol. 2012 Apr 27;6:27. doi: 10.1186/1752-0509-6-27.

10.

Effectiveness of selected surgical masks in arresting vegetative cells and endospores when worn by simulated contagious patients.

Green CF, Davidson CS, Panlilio AL, Jensen PA, Jin Y, Gibbs SG, Scarpino PV.

Infect Control Hosp Epidemiol. 2012 May;33(5):487-94. doi: 10.1086/665321. Epub 2012 Mar 16.

PMID:
22476275
11.

Surgical face masks worn by patients with multidrug-resistant tuberculosis: impact on infectivity of air on a hospital ward.

Dharmadhikari AS, Mphahlele M, Stoltz A, Venter K, Mathebula R, Masotla T, Lubbe W, Pagano M, First M, Jensen PA, van der Walt M, Nardell EA.

Am J Respir Crit Care Med. 2012 May 15;185(10):1104-9. doi: 10.1164/rccm.201107-1190OC. Epub 2012 Feb 9.

12.

TIGER: Toolbox for integrating genome-scale metabolic models, expression data, and transcriptional regulatory networks.

Jensen PA, Lutz KA, Papin JA.

BMC Syst Biol. 2011 Sep 23;5:147. doi: 10.1186/1752-0509-5-147.

13.

Feasibility of selected prophylactic barriers in arrestance of airborne bacterial vegetative cells and endospores.

Davidson CS, Green CF, Gibbs SG, Panlilio AL, Jensen PA, Jin Y, Scarpino PV.

Am J Infect Control. 2011 Sep;39(7):581-6. doi: 10.1016/j.ajic.2010.10.032. Epub 2011 May 14.

PMID:
21570738
14.

Natural infection of guinea pigs exposed to patients with highly drug-resistant tuberculosis.

Dharmadhikari AS, Basaraba RJ, Van Der Walt ML, Weyer K, Mphahlele M, Venter K, Jensen PA, First MW, Parsons S, McMurray DN, Orme IM, Nardell EA.

Tuberculosis (Edinb). 2011 Jul;91(4):329-38. doi: 10.1016/j.tube.2011.03.002. Epub 2011 Apr 7.

15.

Functional integration of a metabolic network model and expression data without arbitrary thresholding.

Jensen PA, Papin JA.

Bioinformatics. 2011 Feb 15;27(4):541-7. doi: 10.1093/bioinformatics/btq702. Epub 2010 Dec 20.

PMID:
21172910
16.

A scalable systems analysis approach for regulated metabolic networks.

Jensen PA, Papin JA.

Conf Proc IEEE Eng Med Biol Soc. 2009;2009:5464-5. doi: 10.1109/IEMBS.2009.5334060.

PMID:
19964682
17.

Investigation of Mycobacterium tuberculosis transmission aboard the U.S.S. Ronald Reagan, 2006.

Buff AM, Deshpande SJ, Harrington TA, Wofford TS, O'Hara TW, Carrigan K, Martin NJ, McDowell JC, Ijaz K, Jensen PA, Lambert LA, Moore M, Oeltmann JE.

Mil Med. 2008 Jun;173(6):588-93.

PMID:
18595424
18.

Tuberculosis infection control in resource-limited settings in the era of expanding HIV care and treatment.

Bock NN, Jensen PA, Miller B, Nardell E.

J Infect Dis. 2007 Aug 15;196 Suppl 1:S108-13. Review.

PMID:
17624819
19.

Development of an empirical model to aid in designing airborne infection isolation rooms.

Hayden CS 2nd, Earnest GS, Jensen PA.

J Occup Environ Hyg. 2007 Mar;4(3):198-207.

PMID:
17237025
20.

Guidelines for preventing the transmission of Mycobacterium tuberculosis in health-care settings, 2005.

Jensen PA, Lambert LA, Iademarco MF, Ridzon R; CDC.

MMWR Recomm Rep. 2005 Dec 30;54(RR-17):1-141.

21.

Test for the integrity of environmental tractor cab filtration systems.

Moyer ES, Heitbrink WA, Jensen PA.

J Occup Environ Hyg. 2005 Oct;2(10):516-23.

PMID:
16183625
22.

Where should infection control programs for tuberculosis begin?

Jensen PA.

Int J Tuberc Lung Dis. 2005 Aug;9(8):825. No abstract available.

PMID:
16104625
23.

Fitting characteristics of eighteen N95 filtering-facepiece respirators.

Coffey CC, Lawrence RB, Campbell DL, Zhuang Z, Calvert CA, Jensen PA.

J Occup Environ Hyg. 2004 Apr;1(4):262-71. Erratum in: J Occup Environ Hyg. 2004 Aug;1(8):558.

PMID:
15204866
24.

Correlation between quantitative fit factors and workplace protection factors measured in actual workplace environments at a steel foundry.

Zhuang Z, Coffey CC, Jensen PA, Campbell DL, Lawrence RB, Myers WR.

AIHA J (Fairfax, Va). 2003 Nov-Dec;64(6):730-8.

PMID:
14674806
25.

Environmental agricultural tractor cab filter efficiency and field evaluation.

Heitbrink WA, Moyer ES, Jensen PA, Watkins DS, Martin SB Jr.

AIHA J (Fairfax, Va). 2003 May-Jun;64(3):394-400.

PMID:
12809546
26.

Comparison of five methods for fit-testing N95 filtering-facepiece respirators.

Coffey CC, Lawrence RB, Zhuang Z, Campbell DL, Jensen PA, Myers WR.

Appl Occup Environ Hyg. 2002 Oct;17(10):723-30.

PMID:
12363214
27.

Improving the health of workers in indoor environments: priority research needs for a national occupational research agenda.

Mendell MJ, Fisk WJ, Kreiss K, Levin H, Alexander D, Cain WS, Girman JR, Hines CJ, Jensen PA, Milton DK, Rexroat LP, Wallingford KM.

Am J Public Health. 2002 Sep;92(9):1430-40.

28.

Method for Evaluating Germicidal Ultraviolet Inactivation of Biocontaminated Surfaces.

Gorsuch EL, Grinshpun SA, Willeke K, Reponen T, Moss CE, Jensen PA.

Int J Occup Saf Ergon. 1998 Jan;4(3):287-297. doi: 10.1080/10803548.1998.11076395.

PMID:
10602623

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