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Items: 1 to 50 of 88

1.

Actinomyces denticolens as a causative agent of actinomycosis in animals.

Murakami S, Kobayashi T, Sekigawa Y, Torii Y, Kanesaki Y, Ishige T, Yokoyama E, Ishiwata H, Hamada M, Tamura T.

J Vet Med Sci. 2018 Sep 14. doi: 10.1292/jvms.18-0207. [Epub ahead of print]

2.

Lactobacillus bambusae sp. nov., isolated from traditional fermented ma bamboo shoots in Taiwan.

Guu JR, Wang LT, Hamada M, Wang C, Lin RW, Huang L, Watanabe K.

Int J Syst Evol Microbiol. 2018 Aug;68(8):2424-2430. doi: 10.1099/ijsem.0.002837. Epub 2018 Jun 19.

PMID:
29916796
3.

Mycobacterial biomaterials and resources for researchers.

Hazbón MH, Rigouts L, Schito M, Ezewudo M, Kudo T, Itoh T, Ohkuma M, Kiss K, Wu L, Ma J, Hamada M, Strong M, Salfinger M, Daley CL, Nick JA, Lee JS, Rastogi N, Couvin D, Hurtado-Ortiz R, Bizet C, Suresh A, Rodwell T, Albertini A, Lacourciere KA, Deheer-Graham A, Alexander S, Russell JE, Bradford R, Riojas MA.

Pathog Dis. 2018 Jun 1;76(4). doi: 10.1093/femspd/fty042.

PMID:
29846561
4.

Reclassification of Nocardia species based on whole genome sequence and associated phenotypic data.

Tamura T, Ohji S, Ichikawa N, Hosoyama A, Yamazoe A, Hamada M, Komaki H, Shibata C, Matsuzawa T, Gonoi T, Suzuki KI, Fujita N.

J Antibiot (Tokyo). 2018 Jul;71(7):633-641. doi: 10.1038/s41429-018-0043-1. Epub 2018 Apr 4.

PMID:
29618770
5.

Agromyces mangrovi sp. nov., a novel actinobacterium isolated from the rhizosphere of a mangrove.

Hamada M, Saitou S, Tamura T.

Arch Microbiol. 2018 Aug;200(6):939-943. doi: 10.1007/s00203-018-1504-4. Epub 2018 Mar 26.

PMID:
29582101
6.

Parolsenella catena gen. nov., sp. nov., isolated from human faeces.

Sakamoto M, Iino T, Hamada M, Ohkuma M.

Int J Syst Evol Microbiol. 2018 Apr;68(4):1165-1172. doi: 10.1099/ijsem.0.002645. Epub 2018 Feb 15.

PMID:
29458507
7.

Draft genome sequence of Streptomyces hyaluromycini MB-PO13T, a hyaluromycin producer.

Harunari E, Komaki H, Ichikawa N, Hosoyama A, Kimura A, Hamada M, Igarashi Y.

Stand Genomic Sci. 2018 Jan 11;13:2. doi: 10.1186/s40793-017-0286-7. eCollection 2018.

8.

Arthrobacter silviterrae sp. nov., isolated from forest soil.

Lee SA, Kim JM, Cho H, Kim SJ, Ahn JH, Hamada M, Kwon SW, Weon HY.

Int J Syst Evol Microbiol. 2017 Nov;67(11):4546-4551. doi: 10.1099/ijsem.0.002329. Epub 2017 Oct 6.

PMID:
28984548
9.

Lysinimicrobium sediminis sp. nov., an actinobacterium isolated from estuary sediment.

Hamada M, Saitou S, Terahara T, Imada C, Tamura T.

Int J Syst Evol Microbiol. 2017 Sep;67(9):3393-3397. doi: 10.1099/ijsem.0.002123. Epub 2017 Sep 6.

PMID:
28875895
10.

Arenivirga flava gen. nov., sp. nov., a new member of the family Microbacteriaceae isolated from a mangrove tidal flat.

Hamada M, Saitou S, Tamura T.

Int J Syst Evol Microbiol. 2017 Sep;67(9):3318-3322. doi: 10.1099/ijsem.0.002113. Epub 2017 Aug 31.

PMID:
28857028
11.

Nakamurella intestinalis sp. nov., isolated from the faeces of Pseudorhynchus japonicus.

Kim SJ, Cho H, Joa JH, Hamada M, Ahn JH, Weon HY, Kwon SW.

Int J Syst Evol Microbiol. 2017 Aug;67(8):2970-2974. doi: 10.1099/ijsem.0.002059. Epub 2017 Aug 18.

PMID:
28820108
12.

Dictyobacter aurantiacus gen. nov., sp. nov., a member of the family Ktedonobacteraceae, isolated from soil, and emended description of the genus Thermosporothrix.

Yabe S, Sakai Y, Abe K, Yokota A, Také A, Matsumoto A, Sugiharto A, Susilowati D, Hamada M, Nara K, Made Sudiana I, Otsuka S.

Int J Syst Evol Microbiol. 2017 Aug;67(8):2615-2621. doi: 10.1099/ijsem.0.001985. Epub 2017 Jul 31.

PMID:
28758628
13.

Virgisporangium myanmarense sp. nov., a novel motile actinomycete isolated from an anthill soil in Myanmar.

Yamamura H, Miyazaki S, Ikoma K, Nakagawa Y, Hamada M, Otoguro M, Tamura T, Ando K, Phay N, Hayakawa M.

J Antibiot (Tokyo). 2017 Oct;70(10):995-999. doi: 10.1038/ja.2017.81. Epub 2017 Jul 12.

PMID:
28698675
14.

International Committee on Systematics of Prokaryotes Subcommittee on the taxonomy of the suborder Micrococcineae Minutes of the meeting, 29 July 2014, Montreal, Canada.

Tóth E, Schumann P, Hamada M, Suzuki KI.

Int J Syst Evol Microbiol. 2017 Jun;67(6):2068-2069. doi: 10.1099/ijsem.0.002058. No abstract available.

PMID:
28665267
15.

Whole-Genome Sequences of Two Closely Related Bacteria, Actinomyces sp. Strain Chiba101 and Actinomyces denticolens DSM 20671T.

Kanesaki Y, Ishige T, Sekigawa Y, Kobayashi T, Torii Y, Yokoyama E, Ishiwata H, Hamada M, Tamura T, Azuma R, Murakami S.

Genome Announc. 2017 Apr 6;5(14). pii: e00126-17. doi: 10.1128/genomeA.00126-17.

16.

Pseudactinotalea terrae gen. nov., sp. nov., isolated from greenhouse soil, and reclassification of Actinotalea suaedae as Pseudactinotalea suaedae comb. nov.

Cho H, Hamada M, Ahn JH, Weon HY, Joa JH, Suzuki KI, Kwon SW, Kim SJ.

Int J Syst Evol Microbiol. 2017 Apr;67(3):704-709. doi: 10.1099/ijsem.0.001701. Epub 2017 Apr 3.

PMID:
27902298
17.

Genome analysis-based reclassification of Streptomyces endus and Streptomyces sporocinereus as later heterotypic synonyms of Streptomyces hygroscopicus subsp. hygroscopicus.

Komaki H, Ichikawa N, Oguchi A, Hamada M, Tamura T, Fujita N, Suzuki KI.

Int J Syst Evol Microbiol. 2017 Feb;67(2):343-345. doi: 10.1099/ijsem.0.001628. Epub 2017 Mar 16.

PMID:
27902297
18.

Draft genome sequence of Streptomyces sp. TP-A0867, an alchivemycin producer.

Komaki H, Ichikawa N, Oguchi A, Hamada M, Harunari E, Kodani S, Fujita N, Igarashi Y.

Stand Genomic Sci. 2016 Oct 24;11:85. eCollection 2016.

19.

Draft genome sequence of Micromonospora sp. DSW705 and distribution of biosynthetic gene clusters for depsipeptides bearing 4-amino-2,4-pentadienoate in actinomycetes.

Komaki H, Ichikawa N, Hosoyama A, Hamada M, Harunari E, Ishikawa A, Igarashi Y.

Stand Genomic Sci. 2016 Oct 22;11:84. eCollection 2016.

20.

Draft genome sequence of Streptomyces sp. MWW064 for elucidating the rakicidin biosynthetic pathway.

Komaki H, Ishikawa A, Ichikawa N, Hosoyama A, Hamada M, Harunari E, Nihira T, Panbangred W, Igarashi Y.

Stand Genomic Sci. 2016 Oct 21;11:83. eCollection 2016.

21.

Reclassification of Amycolicicoccus subflavus as Hoyosella subflava comb. nov. and emended descriptions of the genus Hoyosella and Hoyosella altamirensis.

Hamada M, Shibata C, Sakurai K, Hosoyama A, Oji S, Teramoto K, Tamura T.

Int J Syst Evol Microbiol. 2016 Nov;66(11):4711-4715. doi: 10.1099/ijsem.0.001415. Epub 2016 Aug 10.

PMID:
27514929
22.

Nocardia shinanonensis sp. nov., isolated from a patient with endophthalmitis.

Matsumoto T, Negishi T, Hamada M, Komaki H, Gonoi T, Yaguchi T.

Int J Syst Evol Microbiol. 2016 Sep;66(9):3324-3328. doi: 10.1099/ijsem.0.001197. Epub 2016 Jun 2.

PMID:
27255509
23.

Kocuria pelophila sp. nov., an actinobacterium isolated from the rhizosphere of a mangrove.

Hamada M, Shibata C, Tamura T, Nurkanto A, Ratnakomala S, Lisdiyanti P, Suzuki KI.

Int J Syst Evol Microbiol. 2016 Sep;66(9):3276-3280. doi: 10.1099/ijsem.0.001186. Epub 2016 May 24.

PMID:
27221097
24.

Draft Genome Sequence of Streptomyces hygroscopicus subsp. hygroscopicus NBRC 16556.

Komaki H, Ichikawa N, Oguchi A, Hamada M, Tamura T, Suzuki K, Fujita N.

Genome Announc. 2016 May 19;4(3). pii: e00139-16. doi: 10.1128/genomeA.00139-16.

25.

Mycoavidus cysteinexigens gen. nov., sp. nov., an endohyphal bacterium isolated from a soil isolate of the fungus Mortierella elongata.

Ohshima S, Sato Y, Fujimura R, Takashima Y, Hamada M, Nishizawa T, Narisawa K, Ohta H.

Int J Syst Evol Microbiol. 2016 May;66(5):2052-7. doi: 10.1099/ijsem.0.000990. Epub 2016 Feb 25.

PMID:
26920389
26.

Cellulosimicrobium marinum sp. nov., an actinobacterium isolated from sea sediment.

Hamada M, Shibata C, Tamura T, Nurkanto A, Ratnakomala S, Lisdiyanti P, Suzuki K.

Arch Microbiol. 2016 Jul;198(5):439-44. doi: 10.1007/s00203-016-1204-x. Epub 2016 Feb 23.

PMID:
26905395
27.

Genome-based survey of nonribosomal peptide synthetase and polyketide synthase gene clusters in type strains of the genus Microtetraspora.

Komaki H, Ichikawa N, Tamura T, Oguchi A, Hamada M, Fujita N.

J Antibiot (Tokyo). 2016 Sep;69(9):712-8. doi: 10.1038/ja.2015.139. Epub 2016 Feb 17. No abstract available.

PMID:
26883394
28.

Friedmanniella aerolata sp. nov., isolated from air.

Kim SJ, Hamada M, Ahn JH, Weon HY, Suzuki K, Kwon SW.

Int J Syst Evol Microbiol. 2016 May;66(5):1970-5. doi: 10.1099/ijsem.0.000973. Epub 2016 Feb 12.

PMID:
26873462
29.

Streptomyces hyaluromycini sp. nov., isolated from a tunicate (Molgula manhattensis).

Harunari E, Hamada M, Shibata C, Tamura T, Komaki H, Imada C, Igarashi Y.

J Antibiot (Tokyo). 2016 Mar;69(3):159-63. doi: 10.1038/ja.2015.110. Epub 2015 Nov 4.

PMID:
26531686
30.

Genome-based analysis of non-ribosomal peptide synthetase and type-I polyketide synthase gene clusters in all type strains of the genus Herbidospora.

Komaki H, Ichikawa N, Oguchi A, Hamada M, Tamura T, Fujita N.

BMC Res Notes. 2015 Oct 9;8:548. doi: 10.1186/s13104-015-1526-9.

31.

Cryptosporangium cibodasense sp. nov., isolated from leaf litter in Indonesia.

Nurkanto A, Lisdiyanti P, Hamada M, Ratnakomala S, Shibata C, Tamura T.

Int J Syst Evol Microbiol. 2015 Dec;65(12):4632-7.

PMID:
26395204
32.

Proposal of nine novel species of the genus Lysinimicrobium and emended description of the genus Lysinimicrobium.

Hamada M, Shibata C, Saitou S, Tamura T, Komaki H, Ichikawa N, Oguchi A, Hosoyama A, Fujita N, Yamamura H, Hayakawa M, Suzuki K.

Int J Syst Evol Microbiol. 2015 Dec;65(12):4394-402. doi: 10.1099/ijsem.0.000587. Epub 2015 Sep 8.

PMID:
26354549
33.

Oryzobacter terrae gen. nov., sp. nov., isolated from paddy soil.

Kim SJ, Lim JM, Hamada M, Ahn JH, Weon HY, Suzuki K, Ahn TY, Kwon SW.

Int J Syst Evol Microbiol. 2015 Sep;65(9):3190-5. doi: 10.1099/ijsem.0.000398. Epub 2015 Jun 25.

PMID:
26297674
34.

Actinoplanes bogoriensis sp. nov., a novel actinomycete isolated from leaf litter.

Nurkanto A, Lisdiyanti P, Hamada M, Ratnakomala S, Shibata C, Tamura T.

J Antibiot (Tokyo). 2016 Jan;69(1):26-30. doi: 10.1038/ja.2015.81. Epub 2015 Aug 5.

PMID:
26243557
35.

Actinoplanes tropicalis sp. nov. and Actinoplanes cibodasensis sp. nov., isolated from leaf litter.

Nurkanto A, Lisdiyanti P, Hamada M, Ratnakomala S, Shibata C, Tamura T.

Int J Syst Evol Microbiol. 2015 Nov;65(11):3824-3829. doi: 10.1099/ijsem.0.000499. Epub 2015 Aug 3.

PMID:
26238107
36.

Genome-based analysis of type-I polyketide synthase and nonribosomal peptide synthetase gene clusters in a novel strain taxonomically close to the genus Salinispora.

Komaki H, Tamura T, Ichikawa N, Oguchi A, Hamada M, Suzuki K, Fujita N.

J Antibiot (Tokyo). 2015 Dec;68(12):767-70. doi: 10.1038/ja.2015.69. Epub 2015 Jul 1. No abstract available.

PMID:
26126742
37.

Erratum to: Tropicihabitans flavus gen. nov., sp. nov., a new member of the family Cellulomonadaceae.

Hamada M, Shibata C, Nurkanto A, Ratnakomala S, Lisdiyanti P, Tamura T, Suzuki K.

Antonie Van Leeuwenhoek. 2015 Jul;108(1):221. doi: 10.1007/s10482-015-0474-7. No abstract available.

PMID:
25972252
38.

Draft genome sequences of eight type strains of the genus demequina.

Hamada M, Ichikawa N, Oguchi A, Komaki H, Tamura T, Fujita N.

Genome Announc. 2015 Apr 16;3(2). pii: e00281-15. doi: 10.1128/genomeA.00281-15.

39.

Tropicihabitans flavus gen. nov., sp. nov., a new member of the family Cellulomonadaceae.

Hamada M, Shibata C, Nurkanto A, Ratnakomala S, Lisdiyanti P, Tamura T, Suzuki K.

Antonie Van Leeuwenhoek. 2015 May;107(5):1299-306. doi: 10.1007/s10482-015-0424-4. Epub 2015 Mar 12. Erratum in: Antonie Van Leeuwenhoek. 2015 Jul;108(1):221.

PMID:
25761861
40.

Marmoricola solisilvae sp. nov. and Marmoricola terrae sp. nov., isolated from soil and emended description of the genus Marmoricola.

Kim SJ, Lim JM, Hamada M, Ahn JH, Weon HY, Suzuki K, Ahn TY, Kwon SW.

Int J Syst Evol Microbiol. 2015 Jun;65(Pt 6):1825-30. doi: 10.1099/ijs.0.000184. Epub 2015 Mar 9.

PMID:
25754550
41.

Jatrophihabitans soli sp. nov., isolated from soil.

Kim SJ, Moon JY, Lim JM, Hamada M, Ahn JH, Weon HY, Suzuki K, Kwon SW.

Int J Syst Evol Microbiol. 2015 Jun;65(Pt 6):1759-63. doi: 10.1099/ijs.0.000173. Epub 2015 Mar 5.

PMID:
25744581
42.

Draft Genome Sequence of Streptomyces albus Strain NBRC 13014T, the Type Species of the Genus Streptomyces.

Komaki H, Ichikawa N, Oguchi A, Hamada M, Tamura T, Fujita N.

Genome Announc. 2015 Feb 5;3(1). pii: e01527-14. doi: 10.1128/genomeA.01527-14.

43.

Serinibacter tropicus sp. nov., an actinobacterium isolated from the rhizosphere of a mangrove, and emended description of the genus Serinibacter.

Hamada M, Shibata C, Nurkanto A, Ratnakomala S, Lisdiyanti P, Tamura T, Suzuki K.

Int J Syst Evol Microbiol. 2015 Apr;65(Pt 4):1151-4. doi: 10.1099/ijs.0.000068. Epub 2015 Jan 20.

PMID:
25604338
44.

Draft genome sequences of six type strains of the genus streptacidiphilus.

Komaki H, Ichikawa N, Oguchi A, Hamada M, Tamura T, Fujita N.

Genome Announc. 2015 Jan 8;3(1). pii: e01387-14. doi: 10.1128/genomeA.01387-14.

45.

Ezakiella peruensis gen. nov., sp. nov. isolated from human fecal sample from a coastal traditional community in Peru.

Patel NB, Tito RY, Obregón-Tito AJ, O'Neal L, Trujillo-Villaroel O, Marin-Reyes L, Troncoso-Corzo L, Guija-Poma E, Hamada M, Uchino Y, Lewis CM Jr, Lawson PA.

Anaerobe. 2015 Apr;32:43-48. doi: 10.1016/j.anaerobe.2014.12.002. Epub 2014 Dec 4.

46.

Draft Genome Sequence of Lysinimicrobium mangrovi NBRC 105856T, Isolated from the Rhizosphere of a Mangrove.

Hamada M, Ichikawa N, Oguchi A, Fujita N.

Genome Announc. 2014 Nov 6;2(6). pii: e01131-14. doi: 10.1128/genomeA.01131-14.

47.

Nocardioides daecheongensis sp. nov., isolated from soil.

Lim JM, Kim SJ, Hamada M, Ahn JH, Weon HY, Suzuki K, Ahn TY, Kwon SW.

Int J Syst Evol Microbiol. 2014 Dec;64(Pt 12):4109-14. doi: 10.1099/ijs.0.063610-0. Epub 2014 Sep 23.

PMID:
25249564
48.

Gryllotalpicola soli sp. nov., isolated from soil.

Moon JY, Kim SJ, Hamada M, Ahn JH, Weon HY, Suzuki K, Yoon JH, Kwon SW.

Int J Syst Evol Microbiol. 2014 Dec;64(Pt 12):4079-83. doi: 10.1099/ijs.0.067710-0. Epub 2014 Sep 19.

PMID:
25240021
49.

Agromyces marinus sp. nov., a novel actinobacterium isolated from sea sediment.

Hamada M, Shibata C, Tamura T, Suzuki K.

J Antibiot (Tokyo). 2014 Oct;67(10):703-6. doi: 10.1038/ja.2014.60. Epub 2014 May 14.

PMID:
24824819
50.

Oryzihumus terrae sp. nov., isolated from soil and emended description of the genus Oryzihumus.

Lim JM, Kim SJ, Hamada M, Ahn JH, Weon HY, Suzuki K, Ahn TY, Kwon SW.

Int J Syst Evol Microbiol. 2014 Jul;64(Pt 7):2395-9. doi: 10.1099/ijs.0.060897-0. Epub 2014 Apr 23.

PMID:
24760799

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