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Items: 35

1.

Molecular investigation of isolates from a multistate polymicrobial outbreak associated with contaminated total parenteral nutrition in Brazil.

Pillonetto M, Arend L, Gomes SMT, Oliveira MAA, Timm LN, Martins AF, Barth AL, Mazzetti A, Hersemann L, Smits THM, Mira MT, Rezzonico F.

BMC Infect Dis. 2018 Aug 13;18(1):397. doi: 10.1186/s12879-018-3287-2.

2.

Genome-based population structure analysis of the strawberry plant pathogen Xanthomonas fragariae reveals two distinct groups that evolved independently before its species description.

Gétaz M, Krijger M, Rezzonico F, Smits THM, van der Wolf JM, Pothier JF.

Microb Genom. 2018 Jul;4(7). doi: 10.1099/mgen.0.000189. Epub 2018 Jun 6.

3.

Emended description of the genus Phytobacter, its type species Phytobacter diazotrophicus (Zhang 2008) and description of Phytobacter ursingii sp. nov.

Pillonetto M, Arend LN, Faoro H, D'Espindula HRS, Blom J, Smits THM, Mira MT, Rezzonico F.

Int J Syst Evol Microbiol. 2018 Jan;68(1):176-184. doi: 10.1099/ijsem.0.002477. Epub 2017 Nov 10.

PMID:
29125457
4.

Role of the type VI secretion systems during disease interactions of Erwinia amylovora with its plant host.

Kamber T, Pothier JF, Pelludat C, Rezzonico F, Duffy B, Smits THM.

BMC Genomics. 2017 Aug 17;18(1):628. doi: 10.1186/s12864-017-4010-1.

5.

Pathogen recognition in compatible plant-microbe interactions.

Rezzonico F, Rupp O, Fahrentrapp J.

Sci Rep. 2017 Jul 25;7(1):6383. doi: 10.1038/s41598-017-04792-5.

6.

Erwinia gerundensis sp. nov., a cosmopolitan epiphyte originally isolated from pome fruit trees.

Rezzonico F, Smits THM, Born Y, Blom J, Frey JE, Goesmann A, Cleenwerck I, de Vos P, Bonaterra A, Duffy B, Montesinos E.

Int J Syst Evol Microbiol. 2016 Mar;66(3):1583-1592. doi: 10.1099/ijsem.0.000920. Epub 2016 Jan 26.

PMID:
26813696
7.

Draft Genome Sequence of the Commercial Biocontrol Strain Pantoea agglomerans P10c.

Smits TH, Rezzonico F, Blom J, Goesmann A, Abelli A, Kron Morelli R, Vanneste JL, Duffy B.

Genome Announc. 2015 Dec 10;3(6). pii: e01448-15. doi: 10.1128/genomeA.01448-15.

8.

Phenotypic comparison of clinical and plant-beneficial strains of Pantoea agglomerans.

Bonaterra A, Badosa E, Rezzonico F, Duffy B, Montesinos E.

Int Microbiol. 2014 Jun;17(2):81-90. doi: 10.2436/20.1501.01.210.

9.

Prevalence of type III secretion system in effective biocontrol pseudomonads.

Almario J, Gobbin D, Défago G, Moënne-Loccoz Y, Rezzonico F.

Res Microbiol. 2014 May;165(4):300-4. doi: 10.1016/j.resmic.2014.03.008. Epub 2014 Apr 12.

PMID:
24726926
10.

Nanopore-based instruments as biosensors for future planetary missions.

Rezzonico F.

Astrobiology. 2014 Apr;14(4):344-51. doi: 10.1089/ast.2013.1120. Epub 2014 Mar 31.

PMID:
24684166
11.

Whole-Genome Sequencing of Erwinia amylovora Strains from Mexico Detects Single Nucleotide Polymorphisms in rpsL Conferring Streptomycin Resistance and in the avrRpt2 Effector Altering Host Interactions.

Smits TH, Guerrero-Prieto VM, Hernández-Escarcega G, Blom J, Goesmann A, Rezzonico F, Duffy B, Stockwell VO.

Genome Announc. 2014 Jan 23;2(1). pii: e01229-13. doi: 10.1128/genomeA.01229-13.

12.

Phylogeography and population structure of the biologically invasive phytopathogen Erwinia amylovora inferred using minisatellites.

Bühlmann A, Dreo T, Rezzonico F, Pothier JF, Smits TH, Ravnikar M, Frey JE, Duffy B.

Environ Microbiol. 2014 Jul;16(7):2112-25. doi: 10.1111/1462-2920.12289. Epub 2013 Oct 17.

PMID:
24112873
13.

Phylogenetic position and virulence apparatus of the pear flower necrosis pathogen Erwinia piriflorinigrans CFBP 5888T as assessed by comparative genomics.

Smits TH, Rezzonico F, López MM, Blom J, Goesmann A, Frey JE, Duffy B.

Syst Appl Microbiol. 2013 Oct;36(7):449-56. doi: 10.1016/j.syapm.2013.04.003. Epub 2013 May 29.

PMID:
23726521
14.

Erwinia amylovora loop-mediated isothermal amplification (LAMP) assay for rapid pathogen detection and on-site diagnosis of fire blight.

Bühlmann A, Pothier JF, Rezzonico F, Smits TH, Andreou M, Boonham N, Duffy B, Frey JE.

J Microbiol Methods. 2013 Mar;92(3):332-9. doi: 10.1016/j.mimet.2012.12.017. Epub 2012 Dec 28.

PMID:
23275135
15.

Detection of AI-2 receptors in genomes of Enterobacteriaceae suggests a role of type-2 quorum sensing in closed ecosystems.

Rezzonico F, Smits TH, Duffy B.

Sensors (Basel). 2012;12(5):6645-65. doi: 10.3390/s120506645. Epub 2012 May 21. Review.

16.

Development of species-, strain- and antibiotic biosynthesis-specific quantitative PCR assays for Pantoea agglomerans as tools for biocontrol monitoring.

Braun-Kiewnick A, Lehmann A, Rezzonico F, Wend C, Smits TH, Duffy B.

J Microbiol Methods. 2012 Sep;90(3):315-20. doi: 10.1016/j.mimet.2012.06.004. Epub 2012 Jun 13.

PMID:
22705381
17.

Lipopolysaccharide biosynthesis genes discriminate between Rubus- and Spiraeoideae-infective genotypes of Erwinia amylovora.

Rezzonico F, Braun-Kiewnick A, Mann RA, Rodoni B, Goesmann A, Duffy B, Smits TH.

Mol Plant Pathol. 2012 Oct;13(8):975-84. doi: 10.1111/j.1364-3703.2012.00807.x. Epub 2012 May 15.

PMID:
22583486
18.

Complete genome sequence of clinical isolate Pantoea ananatis LMG 5342.

De Maayer P, Chan WY, Rezzonico F, Bühlmann A, Venter SN, Blom J, Goesmann A, Frey JE, Smits TH, Duffy B, Coutinho TA.

J Bacteriol. 2012 Mar;194(6):1615-6. doi: 10.1128/JB.06715-11.

19.

Metabolic versatility and antibacterial metabolite biosynthesis are distinguishing genomic features of the fire blight antagonist Pantoea vagans C9-1.

Smits TH, Rezzonico F, Kamber T, Blom J, Goesmann A, Ishimaru CA, Frey JE, Stockwell VO, Duffy B.

PLoS One. 2011;6(7):e22247. doi: 10.1371/journal.pone.0022247. Epub 2011 Jul 15.

20.

Diversity, evolution, and functionality of clustered regularly interspaced short palindromic repeat (CRISPR) regions in the fire blight pathogen Erwinia amylovora.

Rezzonico F, Smits TH, Duffy B.

Appl Environ Microbiol. 2011 Jun;77(11):3819-29. doi: 10.1128/AEM.00177-11. Epub 2011 Apr 1.

21.

Evolutionary insights from Erwinia amylovora genomics.

Smits TH, Rezzonico F, Duffy B.

J Biotechnol. 2011 Aug 20;155(1):34-9. doi: 10.1016/j.jbiotec.2010.10.075. Epub 2010 Oct 30.

PMID:
21040749
22.

Genome sequence of the biocontrol agent Pantoea vagans strain C9-1.

Smits TH, Rezzonico F, Kamber T, Goesmann A, Ishimaru CA, Stockwell VO, Frey JE, Duffy B.

J Bacteriol. 2010 Dec;192(24):6486-7. doi: 10.1128/JB.01122-10. Epub 2010 Oct 15.

23.

Genomic and phenotypic characterization of a nonpigmented variant of Pantoea vagans biocontrol strain C9-1 lacking the 530-kb megaplasmid pPag3.

Smits TH, Rezzonico F, Pelludat C, Goesmann A, Frey JE, Duffy B.

FEMS Microbiol Lett. 2010 Jul 1;308(1):48-54. doi: 10.1111/j.1574-6968.2010.01994.x. Epub 2010 Apr 20.

24.

Application of whole-cell matrix-assisted laser desorption ionization-time of flight mass spectrometry for rapid identification and clustering analysis of pantoea species.

Rezzonico F, Vogel G, Duffy B, Tonolla M.

Appl Environ Microbiol. 2010 Jul;76(13):4497-509. doi: 10.1128/AEM.03112-09. Epub 2010 May 7.

25.

Complete genome sequence of the fire blight pathogen Erwinia amylovora CFBP 1430 and comparison to other Erwinia spp.

Smits TH, Rezzonico F, Kamber T, Blom J, Goesmann A, Frey JE, Duffy B.

Mol Plant Microbe Interact. 2010 Apr;23(4):384-93. doi: 10.1094/MPMI-23-4-0384.

26.

Complete genome sequence of the fire blight pathogen Erwinia pyrifoliae DSM 12163T and comparative genomic insights into plant pathogenicity.

Smits TH, Jaenicke S, Rezzonico F, Kamber T, Goesmann A, Frey JE, Duffy B.

BMC Genomics. 2010 Jan 4;11:2. doi: 10.1186/1471-2164-11-2.

27.

Genotypic comparison of Pantoea agglomerans plant and clinical strains.

Rezzonico F, Smits TH, Montesinos E, Frey JE, Duffy B.

BMC Microbiol. 2009 Sep 22;9:204. doi: 10.1186/1471-2180-9-204.

28.

Plant agricultural streptomycin formulations do not carry antibiotic resistance genes.

Rezzonico F, Stockwell VO, Duffy B.

Antimicrob Agents Chemother. 2009 Jul;53(7):3173-7. doi: 10.1128/AAC.00036-09. Epub 2009 May 4.

29.

Lack of genomic evidence of AI-2 receptors suggests a non-quorum sensing role for luxS in most bacteria.

Rezzonico F, Duffy B.

BMC Microbiol. 2008 Sep 20;8:154. doi: 10.1186/1471-2180-8-154.

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Autoinduction in Erwinia amylovora: evidence of an acyl-homoserine lactone signal in the fire blight pathogen.

Molina L, Rezzonico F, Défago G, Duffy B.

J Bacteriol. 2005 May;187(9):3206-13.

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