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Items: 1 to 20 of 41

1.

Robust Analytical Methods for the Accurate Quantification of the Total Biomass Composition of Mammalian Cells.

Széliová D, Schoeny H, Knez Š, Troyer C, Coman C, Rampler E, Koellensperger G, Ahrends R, Hann S, Borth N, Zanghellini J, Ruckerbauer DE.

Methods Mol Biol. 2020;2088:119-160. doi: 10.1007/978-1-0716-0159-4_7.

PMID:
31893373
2.

Coactosin-like 1 integrates signaling critical for shear-dependent thrombus formation in mouse platelets.

Scheller I, Stritt S, Beck S, Peng B, Pleines I, Heinze KG, Braun A, Otto O, Ahrends R, Sickmann A, Bender M, Nieswandt B.

Haematologica. 2019 Oct 3. pii: haematol.2019.225516. doi: 10.3324/haematol.2019.225516. [Epub ahead of print]

3.

jmzTab-M: A Reference Parser, Writer, and Validator for the Proteomics Standards Initiative mzTab 2.0 Metabolomics Standard.

Hoffmann N, Hartler J, Ahrends R.

Anal Chem. 2019 Oct 15;91(20):12615-12618. doi: 10.1021/acs.analchem.9b01987. Epub 2019 Sep 26.

PMID:
31525911
4.

A sensitive and simple targeted proteomics approach to quantify transcription factor and membrane proteins of the unfolded protein response pathway in glioblastoma cells.

Nguyen CDL, Malchow S, Reich S, Steltgens S, Shuvaev KV, Loroch S, Lorenz C, Sickmann A, Knobbe-Thomsen CB, Tews B, Medenbach J, Ahrends R.

Sci Rep. 2019 Jun 20;9(1):8836. doi: 10.1038/s41598-019-45237-5.

5.

RhoA regulates translation of the Nogo-A decoy SPARC in white matter-invading glioblastomas.

Wirthschaft P, Bode J, Soni H, Dietrich F, Krüwel T, Fischer B, Knobbe-Thomsen CB, Rossetti G, Hentschel A, Mack N, Schönig K, Breckwoldt MO, Schmandke A, Pusch S, Medenbach J, Bendszus M, Schwab ME, von Deimling A, Kool M, Herold-Mende C, Reifenberger G, Ahrends R, Tews B.

Acta Neuropathol. 2019 Aug;138(2):275-293. doi: 10.1007/s00401-019-02021-z. Epub 2019 May 6.

6.

First international descriptive and interventional survey for cholesterol and non-cholesterol sterol determination by gas- and liquid-chromatography-Urgent need for harmonisation of analytical methods.

Lütjohann D, Björkhem I, Friedrichs S, Kerksiek A, Lövgren-Sandblom A, Geilenkeuser WJ, Ahrends R, Andrade I, Ansorena D, Astiasarán I, Baila-Rueda L, Barriuso B, Becker S, Bretillon L, Browne RW, Caccia C, Ceglarek U, Cenarro A, Crick PJ, Fauler G, Garcia-Llatas G, Gray R, Griffiths WJ, Gylling H, Harding S, Helmschrodt C, Iuliano L, Janssen HG, Jones P, Kaipiainen L, Kannenberg F, Lagarda MJ, Leoni V, Lottenberg AM, MacKay DS, Matysik S, McDonald J, Menendez-Carreño M, Myrie SB, Sutti Nunes V, Ostlund RE, Polisecki E, Ramos F, Rideout TC, Schaefer EJ, Schmitz G, Wang Y, Zerbinati C, Diczfalusy U, Schött HF.

J Steroid Biochem Mol Biol. 2019 Jun;190:115-125. doi: 10.1016/j.jsbmb.2019.03.025. Epub 2019 Mar 30.

7.

ArhGEF37 assists dynamin 2 during clathrin-mediated endocytosis.

Viplav A, Saha T, Huertas J, Selenschik P, Ebrahimkutty MP, Grill D, Lehrich J, Hentschel A, Biasizzo M, Mengoni S, Ahrends R, Gerke V, Cojocaru V, Klingauf J, Galic M.

J Cell Sci. 2019 May 8;132(9). pii: jcs226530. doi: 10.1242/jcs.226530.

8.

Nano-LC/NSI MS Refines Lipidomics by Enhancing Lipid Coverage, Measurement Sensitivity, and Linear Dynamic Range.

Danne-Rasche N, Coman C, Ahrends R.

Anal Chem. 2018 Jul 3;90(13):8093-8101. doi: 10.1021/acs.analchem.8b01275. Epub 2018 Jun 11.

PMID:
29792796
9.

Identification of key lipids critical for platelet activation by comprehensive analysis of the platelet lipidome.

Peng B, Geue S, Coman C, Münzer P, Kopczynski D, Has C, Hoffmann N, Manke MC, Lang F, Sickmann A, Gawaz M, Borst O, Ahrends R.

Blood. 2018 Aug 2;132(5):e1-e12. doi: 10.1182/blood-2017-12-822890. Epub 2018 May 21.

10.

UDP-glucose ceramide glucosyltransferase activates AKT, promoted proliferation, and doxorubicin resistance in breast cancer cells.

Wegner MS, Schömel N, Gruber L, Örtel SB, Kjellberg MA, Mattjus P, Kurz J, Trautmann S, Peng B, Wegner M, Kaulich M, Ahrends R, Geisslinger G, Grösch S.

Cell Mol Life Sci. 2018 Sep;75(18):3393-3410. doi: 10.1007/s00018-018-2799-7. Epub 2018 Mar 17.

PMID:
29549423
11.

Proposal for a common nomenclature for fragment ions in mass spectra of lipids.

Pauling JK, Hermansson M, Hartler J, Christiansen K, Gallego SF, Peng B, Ahrends R, Ejsing CS.

PLoS One. 2017 Nov 21;12(11):e0188394. doi: 10.1371/journal.pone.0188394. eCollection 2017.

12.

A Comprehensive High-Resolution Targeted Workflow for the Deep Profiling of Sphingolipids.

Peng B, Weintraub ST, Coman C, Ponnaiyan S, Sharma R, Tews B, Winter D, Ahrends R.

Anal Chem. 2017 Nov 21;89(22):12480-12487. doi: 10.1021/acs.analchem.7b03576. Epub 2017 Nov 2.

PMID:
29039908
13.

Landscape of submitochondrial protein distribution.

Vögtle FN, Burkhart JM, Gonczarowska-Jorge H, Kücükköse C, Taskin AA, Kopczynski D, Ahrends R, Mossmann D, Sickmann A, Zahedi RP, Meisinger C.

Nat Commun. 2017 Aug 18;8(1):290. doi: 10.1038/s41467-017-00359-0.

14.

Computational proteomics tools for identification and quality control.

Kopczynski D, Sickmann A, Ahrends R.

J Biotechnol. 2017 Nov 10;261:126-130. doi: 10.1016/j.jbiotec.2017.06.1199. Epub 2017 Jul 1. Review.

PMID:
28676234
15.

LILY-lipidome isotope labeling of yeast: in vivo synthesis of 13C labeled reference lipids for quantification by mass spectrometry.

Rampler E, Coman C, Hermann G, Sickmann A, Ahrends R, Koellensperger G.

Analyst. 2017 Jun 7;142(11):1891-1899. doi: 10.1039/c7an00107j. Epub 2017 May 5.

PMID:
28475182
16.

PeptideMapper: efficient and versatile amino acid sequence and tag mapping.

Kopczynski D, Barsnes H, Njølstad PR, Sickmann A, Vaudel M, Ahrends R.

Bioinformatics. 2017 Jul 1;33(13):2042-2044. doi: 10.1093/bioinformatics/btx122.

PMID:
28334306
17.

A novel physiological role for cardiac myoglobin in lipid metabolism.

Hendgen-Cotta UB, Esfeld S, Coman C, Ahrends R, Klein-Hitpass L, Flögel U, Rassaf T, Totzeck M.

Sci Rep. 2017 Feb 23;7:43219. doi: 10.1038/srep43219.

18.

Multi-OMICS: a critical technical perspective on integrative lipidomics approaches.

Kopczynski D, Coman C, Zahedi RP, Lorenz K, Sickmann A, Ahrends R.

Biochim Biophys Acta Mol Cell Biol Lipids. 2017 Aug;1862(8):808-811. doi: 10.1016/j.bbalip.2017.02.003. Epub 2017 Feb 11. Review.

PMID:
28193460
19.

Simultaneous Metabolite, Protein, Lipid Extraction (SIMPLEX): A Combinatorial Multimolecular Omics Approach for Systems Biology.

Coman C, Solari FA, Hentschel A, Sickmann A, Zahedi RP, Ahrends R.

Mol Cell Proteomics. 2016 Apr;15(4):1453-66. doi: 10.1074/mcp.M115.053702. Epub 2016 Jan 26.

20.

Monitoring PPARG-Induced Changes in Glycolysis by Selected Reaction Monitoring Mass Spectrometry.

Hentschel A, Ahrends R.

Methods Mol Biol. 2016;1394:57-74. doi: 10.1007/978-1-4939-3341-9_5.

PMID:
26700041

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