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Items: 1 to 20 of 155

1.

Quantitative Comparison of Proteomes Using SILAC.

Deng J, Erdjument-Bromage H, Neubert TA.

Curr Protoc Protein Sci. 2018 Sep 20:e74. doi: 10.1002/cpps.74. [Epub ahead of print]

PMID:
30238645
2.

Dppa2/4 Facilitate Epigenetic Remodeling during Reprogramming to Pluripotency.

Hernandez C, Wang Z, Ramazanov B, Tang Y, Mehta S, Dambrot C, Lee YW, Tessema K, Kumar I, Astudillo M, Neubert TA, Guo S, Ivanova NB.

Cell Stem Cell. 2018 Sep 6;23(3):396-411.e8. doi: 10.1016/j.stem.2018.08.001. Epub 2018 Aug 23.

PMID:
30146411
3.

The vimentin intermediate filament network restrains regulatory T cell suppression of graft-versus-host disease.

McDonald-Hyman C, Muller JT, Loschi M, Thangavelu G, Saha A, Kumari S, Reichenbach DK, Smith MJ, Zhang G, Koehn BH, Lin J, Mitchell JS, Fife BT, Panoskaltsis-Mortari A, Feser CJ, Kirchmeier AK, Osborn MJ, Hippen KL, Kelekar A, Serody JS, Turka LA, Munn DH, Chi H, Neubert TA, Dustin ML, Blazar BR.

J Clin Invest. 2018 Aug 14. pii: 95713. doi: 10.1172/JCI95713. [Epub ahead of print]

4.

Unveiling Brain Aβ Heterogeneity Through Targeted Proteomic Analysis.

Rostagno A, Neubert TA, Ghiso J.

Methods Mol Biol. 2018;1779:23-43. doi: 10.1007/978-1-4939-7816-8_3.

PMID:
29886525
5.

Designing a Tablet-Based Software App for Mapping Bodily Symptoms: Usability Evaluation and Reproducibility Analysis.

Neubert TA, Dusch M, Karst M, Beissner F.

JMIR Mhealth Uhealth. 2018 May 30;6(5):e127. doi: 10.2196/mhealth.8409.

6.

Communicating the nutritional value of sugar in Drosophila.

Abu F, Wang JG, Oh Y, Deng J, Neubert TA, Suh GSB.

Proc Natl Acad Sci U S A. 2018 Mar 20;115(12):E2829-E2838. doi: 10.1073/pnas.1719827115. Epub 2018 Mar 5.

7.

Sample Preparation for Relative Quantitation of Proteins Using Tandem Mass Tags (TMT) and Mass Spectrometry (MS).

Erdjument-Bromage H, Huang FK, Neubert TA.

Methods Mol Biol. 2018;1741:135-149. doi: 10.1007/978-1-4939-7659-1_11.

PMID:
29392697
8.

Metabolomic Analysis of Glioma Cells Using Nanoflow Liquid Chromatography-Tandem Mass Spectrometry.

Deng J, Zhang G, Neubert TA.

Methods Mol Biol. 2018;1741:125-134. doi: 10.1007/978-1-4939-7659-1_10.

PMID:
29392696
9.

A Non-canonical BCOR-PRC1.1 Complex Represses Differentiation Programs in Human ESCs.

Wang Z, Gearhart MD, Lee YW, Kumar I, Ramazanov B, Zhang Y, Hernandez C, Lu AY, Neuenkirchen N, Deng J, Jin J, Kluger Y, Neubert TA, Bardwell VJ, Ivanova NB.

Cell Stem Cell. 2018 Feb 1;22(2):235-251.e9. doi: 10.1016/j.stem.2017.12.002. Epub 2018 Jan 11.

PMID:
29337181
10.

Low-Grade Astrocytoma Mutations in IDH1, P53, and ATRX Cooperate to Block Differentiation of Human Neural Stem Cells via Repression of SOX2.

Modrek AS, Golub D, Khan T, Bready D, Prado J, Bowman C, Deng J, Zhang G, Rocha PP, Raviram R, Lazaris C, Stafford JM, LeRoy G, Kader M, Dhaliwal J, Bayin NS, Frenster JD, Serrano J, Chiriboga L, Baitalmal R, Nanjangud G, Chi AS, Golfinos JG, Wang J, Karajannis MA, Bonneau RA, Reinberg D, Tsirigos A, Zagzag D, Snuderl M, Skok JA, Neubert TA, Placantonakis DG.

Cell Rep. 2017 Oct 31;21(5):1267-1280. doi: 10.1016/j.celrep.2017.10.009.

11.

A novel requirement for DROSHA in maintenance of mammalian CG methylation.

Stathopoulou A, Chhetri JB, Ambrose JC, Estève PO, Ji L, Erdjument-Bromage H, Zhang G, Neubert TA, Pradhan S, Herrero J, Schmitz RJ, Ooi SKT.

Nucleic Acids Res. 2017 Sep 19;45(16):9810. doi: 10.1093/nar/gkx736. No abstract available.

12.

A novel requirement for DROSHA in maintenance of mammalian CG methylation.

Stathopoulou A, Chhetri JB, Ambrose JC, Estève PO, Ji L, Erdjument-Bromage H, Zhang G, Neubert TA, Pradhan S, Herrero J, Schmitz RJ, Ooi SKT.

Nucleic Acids Res. 2017 Sep 19;45(16):9398-9412. doi: 10.1093/nar/gkx695.

13.

Enhanced exosome secretion in Down syndrome brain - a protective mechanism to alleviate neuronal endosomal abnormalities.

Gauthier SA, Pérez-González R, Sharma A, Huang FK, Alldred MJ, Pawlik M, Kaur G, Ginsberg SD, Neubert TA, Levy E.

Acta Neuropathol Commun. 2017 Aug 29;5(1):65. doi: 10.1186/s40478-017-0466-0.

14.

Uncoupling the Mitogenic and Metabolic Functions of FGF1 by Tuning FGF1-FGF Receptor Dimer Stability.

Huang Z, Tan Y, Gu J, Liu Y, Song L, Niu J, Zhao L, Srinivasan L, Lin Q, Deng J, Li Y, Conklin DJ, Neubert TA, Cai L, Li X, Mohammadi M.

Cell Rep. 2017 Aug 15;20(7):1717-1728. doi: 10.1016/j.celrep.2017.06.063.

15.

Extracellular phosphorylation of a receptor tyrosine kinase controls synaptic localization of NMDA receptors and regulates pathological pain.

Hanamura K, Washburn HR, Sheffler-Collins SI, Xia NL, Henderson N, Tillu DV, Hassler S, Spellman DS, Zhang G, Neubert TA, Price TJ, Dalva MB.

PLoS Biol. 2017 Jul 18;15(7):e2002457. doi: 10.1371/journal.pbio.2002457. eCollection 2017 Jul.

16.

Aβ truncated species: Implications for brain clearance mechanisms and amyloid plaque deposition.

Cabrera E, Mathews P, Mezhericher E, Beach TG, Deng J, Neubert TA, Rostagno A, Ghiso J.

Biochim Biophys Acta Mol Basis Dis. 2018 Jan;1864(1):208-225. doi: 10.1016/j.bbadis.2017.07.005. Epub 2017 Jul 13.

PMID:
28711595
17.

Endothelium-Independent Primitive Myxoid Vascularization Creates Invertebrate-Like Channels to Maintain Blood Supply in Optic Gliomas.

Snuderl M, Zhang G, Wu P, Jennings TS, Shroff S, Ortenzi V, Jain R, Cohen B, Reidy JJ, Dushay MS, Wisoff JH, Harter DH, Karajannis MA, Fenyo D, Neubert TA, Zagzag D.

Am J Pathol. 2017 Aug;187(8):1867-1878. doi: 10.1016/j.ajpath.2017.04.004. Epub 2017 Jun 9.

18.

Elucidation of a four-site allosteric network in fibroblast growth factor receptor tyrosine kinases.

Chen H, Marsiglia WM, Cho MK, Huang Z, Deng J, Blais SP, Gai W, Bhattacharya S, Neubert TA, Traaseth NJ, Mohammadi M.

Elife. 2017 Feb 6;6. pii: e21137. doi: 10.7554/eLife.21137.

19.

Deep Coverage of Global Protein Expression and Phosphorylation in Breast Tumor Cell Lines Using TMT 10-plex Isobaric Labeling.

Huang FK, Zhang G, Lawlor K, Nazarian A, Philip J, Tempst P, Dephoure N, Neubert TA.

J Proteome Res. 2017 Mar 3;16(3):1121-1132. doi: 10.1021/acs.jproteome.6b00374. Epub 2017 Feb 3.

20.

ABRF Proteome Informatics Research Group (iPRG) 2015 Study: Detection of Differentially Abundant Proteins in Label-Free Quantitative LC-MS/MS Experiments.

Choi M, Eren-Dogu ZF, Colangelo C, Cottrell J, Hoopmann MR, Kapp EA, Kim S, Lam H, Neubert TA, Palmblad M, Phinney BS, Weintraub ST, MacLean B, Vitek O.

J Proteome Res. 2017 Feb 3;16(2):945-957. doi: 10.1021/acs.jproteome.6b00881. Epub 2017 Jan 3.

PMID:
27990823

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