Similar articles for PMID: 30509173

Year	Number of Results
2010	1
2011	2
2012	2
2013	4
2014	10
2015	13
2016	26
2017	17
2018	8
2019	4
2021	3
2022	1
2023	1
2024	0

1

Integrated genome sizing (IGS) approach for the parallelization of whole genome analysis.

Sona P, Hong JH, Lee S, Kim BJ, Hong WY, Jung J, Kim HN, Kim HL, Christopher D, Herviou L, Im YH, Lee KY, Kim TS, Jung J. Sona P, et al. BMC Bioinformatics. 2018 Dec 3;19(1):462. doi: 10.1186/s12859-018-2499-1. BMC Bioinformatics. 2018. PMID: 30509173 Free PMC article.

2

Group-based variant calling leveraging next-generation supercomputing for large-scale whole-genome sequencing studies.

Standish KA, Carland TM, Lockwood GK, Pfeiffer W, Tatineni M, Huang CC, Lamberth S, Cherkas Y, Brodmerkel C, Jaeger E, Smith L, Rajagopal G, Curran ME, Schork NJ. Standish KA, et al. BMC Bioinformatics. 2015 Sep 22;16(1):304. doi: 10.1186/s12859-015-0736-4. BMC Bioinformatics. 2015. PMID: 26395405 Free PMC article.

3

Supercomputing for the parallelization of whole genome analysis.

Puckelwartz MJ, Pesce LL, Nelakuditi V, Dellefave-Castillo L, Golbus JR, Day SM, Cappola TP, Dorn GW 2nd, Foster IT, McNally EM. Puckelwartz MJ, et al. Bioinformatics. 2014 Jun 1;30(11):1508-13. doi: 10.1093/bioinformatics/btu071. Epub 2014 Feb 12. Bioinformatics. 2014. PMID: 24526712 Free PMC article.

4

From Wet-Lab to Variations: Concordance and Speed of Bioinformatics Pipelines for Whole Genome and Whole Exome Sequencing.

Laurie S, Fernandez-Callejo M, Marco-Sola S, Trotta JR, Camps J, Chacón A, Espinosa A, Gut M, Gut I, Heath S, Beltran S. Laurie S, et al. Hum Mutat. 2016 Dec;37(12):1263-1271. doi: 10.1002/humu.23114. Epub 2016 Sep 26. Hum Mutat. 2016. PMID: 27604516 Free PMC article.

5

A Survey of Software and Hardware Approaches to Performing Read Alignment in Next Generation Sequencing.

Al Kawam A, Khatri S, Datta A. Al Kawam A, et al. IEEE/ACM Trans Comput Biol Bioinform. 2017 Nov-Dec;14(6):1202-1213. doi: 10.1109/TCBB.2016.2586070. Epub 2016 Jun 29. IEEE/ACM Trans Comput Biol Bioinform. 2017. PMID: 27362989

6

PGen: large-scale genomic variations analysis workflow and browser in SoyKB.

Liu Y, Khan SM, Wang J, Rynge M, Zhang Y, Zeng S, Chen S, Maldonado Dos Santos JV, Valliyodan B, Calyam PP, Merchant N, Nguyen HT, Xu D, Joshi T. Liu Y, et al. BMC Bioinformatics. 2016 Oct 6;17(Suppl 13):337. doi: 10.1186/s12859-016-1227-y. BMC Bioinformatics. 2016. PMID: 27766951 Free PMC article.

7

Next-generation sequencing: big data meets high performance computing.

Schmidt B, Hildebrandt A. Schmidt B, et al. Drug Discov Today. 2017 Apr;22(4):712-717. doi: 10.1016/j.drudis.2017.01.014. Epub 2017 Feb 2. Drug Discov Today. 2017. PMID: 28163155 Review.

8

Next-generation sequencing (NGS) in the microbiological world: How to make the most of your money.

Vincent AT, Derome N, Boyle B, Culley AI, Charette SJ. Vincent AT, et al. J Microbiol Methods. 2017 Jul;138:60-71. doi: 10.1016/j.mimet.2016.02.016. Epub 2016 Mar 16. J Microbiol Methods. 2017. PMID: 26995332 Review.

9

Parallel and Space-Efficient Construction of Burrows-Wheeler Transform and Suffix Array for Big Genome Data.

Liu Y, Hankeln T, Schmidt B. Liu Y, et al. IEEE/ACM Trans Comput Biol Bioinform. 2016 May-Jun;13(3):592-8. doi: 10.1109/TCBB.2015.2430314. IEEE/ACM Trans Comput Biol Bioinform. 2016. PMID: 27295644

10

Opportunities and challenges of whole-genome and -exome sequencing.

Petersen BS, Fredrich B, Hoeppner MP, Ellinghaus D, Franke A. Petersen BS, et al. BMC Genet. 2017 Feb 14;18(1):14. doi: 10.1186/s12863-017-0479-5. BMC Genet. 2017. PMID: 28193154 Free PMC article. Review.

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