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Items: 1 to 20 of 105

1.

Detection of Uncommon Enteric Bacterial Pathogens from Acute Diarrheal Specimens Using SYBR-Green Real Time PCR.

Chowdhury G, Stine OC, Rajendran K, Mukhopadhyay AK, Okamoto K, Ramamurthy T.

Jpn J Infect Dis. 2019 Mar 25;72(2):88-93. doi: 10.7883/yoken.JJID.2018.142. Epub 2018 Oct 31.

2.

A quantitative polymerase chain reaction assay for rapid detection of 9 pathogens directly from stools of travelers with diarrhea.

Antikainen J, Kantele A, Pakkanen SH, Lääveri T, Riutta J, Vaara M, Kirveskari J.

Clin Gastroenterol Hepatol. 2013 Oct;11(10):1300-1307.e3. doi: 10.1016/j.cgh.2013.03.037. Epub 2013 Apr 29.

PMID:
23639597
3.
4.

Evaluation of Luminex xTAG Gastrointestinal Pathogen Panel Assay for Detection of Multiple Diarrheal Pathogens in Fecal Samples in Vietnam.

Duong VT, Phat VV, Tuyen HT, Dung TT, Trung PD, Minh PV, Tu le TP, Campbell JI, Le Phuc H, Ha TT, Ngoc NM, Huong NT, Tam PT, Huong DT, Xang NV, Dong N, Phuong le T, Hung NV, Phu BD, Phuc TM, Thwaites GE, Vi LL, Rabaa MA, Thompson CN, Baker S.

J Clin Microbiol. 2016 Apr;54(4):1094-100. doi: 10.1128/JCM.03321-15. Epub 2016 Feb 10.

5.

Survey of culture, goldengate assay, universal biosensor assay, and 16S rRNA Gene sequencing as alternative methods of bacterial pathogen detection.

Lindsay B, Pop M, Antonio M, Walker AW, Mai V, Ahmed D, Oundo J, Tamboura B, Panchalingam S, Levine MM, Kotloff K, Li S, Magder LS, Paulson JN, Liu B, Ikumapayi U, Ebruke C, Dione M, Adeyemi M, Rance R, Stares MD, Ukhanova M, Barnes B, Lewis I, Ahmed F, Alam MT, Amin R, Siddiqui S, Ochieng JB, Ouma E, Juma J, Mailu E, Omore R, O'Reilly CE, Hannis J, Manalili S, Deleon J, Yasuda I, Blyn L, Ranken R, Li F, Housley R, Ecker DJ, Hossain MA, Breiman RF, Morris JG, McDaniel TK, Parkhill J, Saha D, Sampath R, Stine OC, Nataro JP.

J Clin Microbiol. 2013 Oct;51(10):3263-9. doi: 10.1128/JCM.01342-13. Epub 2013 Jul 24.

6.

A duplex real-time PCR for the detection of Streptococcus pneumoniae and Neisseria meningitidis in cerebrospinal fluid.

Diawara I, Katfy K, Zerouali K, Belabbes H, Elmdaghri N.

J Infect Dev Ctries. 2016 Jan 31;10(1):53-61. doi: 10.3855/jidc.5647.

7.

Pentaplex PCR assay for detection of hemorrhagic bacteria from stool samples.

Al-Talib H, Latif B, Mohd-Zain Z.

J Clin Microbiol. 2014 Sep;52(9):3244-9. doi: 10.1128/JCM.00891-14. Epub 2014 Jun 23.

8.

A probe-free four-tube real-time PCR assay for simultaneous detection of twelve enteric viruses and bacteria.

Zhang C, Niu P, Hong Y, Wang J, Zhang J, Ma X.

J Microbiol Methods. 2015 Nov;118:93-8. doi: 10.1016/j.mimet.2015.08.023. Epub 2015 Sep 3.

PMID:
26342434
9.

Multisite Evaluation of the BD Max Extended Enteric Bacterial Panel for Detection of Yersinia enterocolitica, Enterotoxigenic Escherichia coli, Vibrio, and Plesiomonas shigelloides from Stool Specimens.

Simner PJ, Oethinger M, Stellrecht KA, Pillai DR, Yogev R, Leblond H, Mortensen J.

J Clin Microbiol. 2017 Nov;55(11):3258-3266. doi: 10.1128/JCM.00911-17. Epub 2017 Sep 6.

10.

Multicenter evaluation of the BD max enteric bacterial panel PCR assay for rapid detection of Salmonella spp., Shigella spp., Campylobacter spp. (C. jejuni and C. coli), and Shiga toxin 1 and 2 genes.

Harrington SM, Buchan BW, Doern C, Fader R, Ferraro MJ, Pillai DR, Rychert J, Doyle L, Lainesse A, Karchmer T, Mortensen JE.

J Clin Microbiol. 2015 May;53(5):1639-47. doi: 10.1128/JCM.03480-14. Epub 2015 Mar 4.

11.

A SYBR Green-based real-time RT-PCR assay for simple and rapid detection and differentiation of highly pathogenic and classical type 2 porcine reproductive and respiratory syndrome virus circulating in China.

Chai Z, Ma W, Fu F, Lang Y, Wang W, Tong G, Liu Q, Cai X, Li X.

Arch Virol. 2013 Feb;158(2):407-15. doi: 10.1007/s00705-012-1504-7. Epub 2012 Oct 16.

PMID:
23070137
12.

Detection of major diarrheagenic bacterial pathogens by multiplex PCR panels.

Sjöling Å, Sadeghipoorjahromi L, Novak D, Tobias J.

Microbiol Res. 2015 Mar;172:34-40. doi: 10.1016/j.micres.2014.12.003. Epub 2014 Dec 12.

13.

Case-control comparison of bacterial and protozoan microorganisms associated with gastroenteritis: application of molecular detection.

Bruijnesteijn van Coppenraet LE, Dullaert-de Boer M, Ruijs GJ, van der Reijden WA, van der Zanden AG, Weel JF, Schuurs TA.

Clin Microbiol Infect. 2015 Jun;21(6):592.e9-19. doi: 10.1016/j.cmi.2015.02.007. Epub 2015 Feb 18.

14.

Rapid Molecular Detection of Gastrointestinal Pathogens and Its Role in Antimicrobial Stewardship.

Keske Ş, Zabun B, Aksoy K, Can F, Palaoğlu E, Ergönül Ö.

J Clin Microbiol. 2018 Apr 25;56(5). pii: e00148-18. doi: 10.1128/JCM.00148-18. Print 2018 May.

15.
16.

Development of a SYBR green I real-time PCR assay for specific identification of the fish pathogen Aeromonas salmonicida subspecies salmonicida.

Fernández-Álvarez C, González SF, Santos Y.

Appl Microbiol Biotechnol. 2016 Dec;100(24):10585-10595. Epub 2016 Nov 12.

PMID:
27838837
17.

Culture-independent real-time PCR reveals extensive polymicrobial infections in hospitalized diarrhoea cases in Kolkata, India.

Sinha A, SenGupta S, Guin S, Dutta S, Ghosh S, Mukherjee P, Mukhopadhyay AK, Ramamurthy T, Takeda Y, Kurakawa T, Nomoto K, Nair GB, Nandy RK.

Clin Microbiol Infect. 2013 Feb;19(2):173-80. doi: 10.1111/j.1469-0691.2011.03746.x. Epub 2012 Jan 23.

18.

Sensitive quantification of Clostridium perfringens in human feces by quantitative real-time PCR targeting alpha-toxin and enterotoxin genes.

Nagpal R, Ogata K, Tsuji H, Matsuda K, Takahashi T, Nomoto K, Suzuki Y, Kawashima K, Nagata S, Yamashiro Y.

BMC Microbiol. 2015 Oct 19;15:219. doi: 10.1186/s12866-015-0561-y.

19.

FilmArray™ GI panel performance for the diagnosis of acute gastroenteritis or hemorragic diarrhea.

Piralla A, Lunghi G, Ardissino G, Girello A, Premoli M, Bava E, Arghittu M, Colombo MR, Cognetto A, Bono P, Campanini G, Marone P, Baldanti F.

BMC Microbiol. 2017 May 12;17(1):111. doi: 10.1186/s12866-017-1018-2.

20.

Pathogen-Specific Burden of Outpatient Diarrhea in Infants in Nepal: A Multisite Prospective Case-Control Study.

Cardemil CV, Sherchand JB, Shrestha L, Sharma A, Gary HE, Estivariz CF, Diez-Valcarce M, Ward ML, Bowen MD, Vinjé J, Parashar U, Chu SY.

J Pediatric Infect Dis Soc. 2017 Sep 1;6(3):e75-e85. doi: 10.1093/jpids/pix009.

PMID:
28472489

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