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Items: 1 to 20 of 142


Population Dynamics Among six Major Groups of the Oryza rufipogon Species Complex, Wild Relative of Cultivated Asian Rice.

Kim H, Jung J, Singh N, Greenberg A, Doyle JJ, Tyagi W, Chung JW, Kimball J, Hamilton RS, McCouch SR.

Rice (N Y). 2016 Dec;9(1):56. doi: 10.1186/s12284-016-0119-0. Epub 2016 Oct 12. Erratum in: Rice (N Y). 2017 Dec;10 (1):17.


Polymorphism and phylogenetic relationships among species in the genus Oryza as determined by analysis of nuclear RFLPs.

Wang ZY, Second G, Tanksley SD.

Theor Appl Genet. 1992 Mar;83(5):565-81. doi: 10.1007/BF00226900.


Multilocus analysis of nucleotide variation of Oryza sativa and its wild relatives: severe bottleneck during domestication of rice.

Zhu Q, Zheng X, Luo J, Gaut BS, Ge S.

Mol Biol Evol. 2007 Mar;24(3):875-88. Epub 2007 Jan 11.


Chloroplast DNA polymorphism and evolutional relationships between Asian cultivated rice (Oryza sativa) and its wild relatives (O. rufipogon).

Li WJ, Zhang B, Huang GW, Kang GP, Liang MZ, Chen LB.

Genet Mol Res. 2012 Dec 17;11(4):4418-31. doi: 10.4238/2012.October.9.8.


Phylogeography of Asian wild rice, Oryza rufipogon: a genome-wide view.

Huang P, Molina J, Flowers JM, Rubinstein S, Jackson SA, Purugganan MD, Schaal BA.

Mol Ecol. 2012 Sep;21(18):4593-604. doi: 10.1111/j.1365-294X.2012.05625.x. Epub 2012 May 30.


Domestication and geographic origin of Oryza sativa in China: insights from multilocus analysis of nucleotide variation of O. sativa and O. rufipogon.

Wei X, Qiao WH, Chen YT, Wang RS, Cao LR, Zhang WX, Yuan NN, Li ZC, Zeng HL, Yang QW.

Mol Ecol. 2012 Oct;21(20):5073-87. doi: 10.1111/j.1365-294X.2012.05748.x. Epub 2012 Sep 18.


Phylogeography of Asian wild rice, Oryza rufipogon, reveals multiple independent domestications of cultivated rice, Oryza sativa.

Londo JP, Chiang YC, Hung KH, Chiang TY, Schaal BA.

Proc Natl Acad Sci U S A. 2006 Jun 20;103(25):9578-83. Epub 2006 Jun 9.


Morphological and Molecular Data Reveal Three Distinct Populations of Indian Wild Rice Oryza rufipogon Griff. Species Complex.

Singh B, Singh N, Mishra S, Tripathi K, Singh BP, Rai V, Singh AK, Singh NK.

Front Plant Sci. 2018 Feb 7;9:123. doi: 10.3389/fpls.2018.00123. eCollection 2018.


Genetic variation in the chloroplast genome suggests multiple domestication of cultivated Asian rice (Oryza sativa L.).

Kawakami S, Ebana K, Nishikawa T, Sato Y, Vaughan DA, Kadowaki K.

Genome. 2007 Feb;50(2):180-7.


RAPD, RFLP and SSLP analyses of phylogenetic relationships between cultivated and wild species of rice.

Bautista NS, Solis R, Kamijima O, Ishii T.

Genes Genet Syst. 2001 Apr;76(2):71-9.


Diversity of the Ty-1 copia retrotransposon Tos17 in rice (Oryza sativa L.) and the AA genome of the Oryza genus.

Petit J, Bourgeois E, Stenger W, Bès M, Droc G, Meynard D, Courtois B, Ghesquière A, Sabot F, Panaud O, Guiderdoni E.

Mol Genet Genomics. 2009 Dec;282(6):633-52. doi: 10.1007/s00438-009-0493-z. Epub 2009 Oct 25.


Polyphyletic origin of cultivated rice: based on the interspersion pattern of SINEs.

Cheng C, Motohashi R, Tsuchimoto S, Fukuta Y, Ohtsubo H, Ohtsubo E.

Mol Biol Evol. 2003 Jan;20(1):67-75.


Chloroplast genome sequence confirms distinctness of Australian and Asian wild rice.

Waters DL, Nock CJ, Ishikawa R, Rice N, Henry RJ.

Ecol Evol. 2012 Jan;2(1):211-7. doi: 10.1002/ece3.66.


The Rice Paradox: Multiple Origins but Single Domestication in Asian Rice.

Choi JY, Platts AE, Fuller DQ, Hsing YI, Wing RA, Purugganan MD.

Mol Biol Evol. 2017 Apr 1;34(4):969-979. doi: 10.1093/molbev/msx049.


Origin of Oryza sativa in China inferred by nucleotide polymorphisms of organelle DNA.

Wei X, Wang R, Cao L, Yuan N, Huang J, Qiao W, Zhang W, Zeng H, Yang Q.

PLoS One. 2012;7(11):e49546. doi: 10.1371/journal.pone.0049546. Epub 2012 Nov 15.


[A study of the genetic diversity of common wild rice (O. rufipogon Griff.) and cultivated rice (O. sativa L.) by RFLP analysis].

Sun CQ, Wang XK, Yoshimura A, Iwata N.

Yi Chuan Xue Bao. 2000;27(3):227-34. Chinese.


Australian wild rice reveals pre-domestication origin of polymorphism deserts in rice genome.

Krishnan S G, Waters DL, Henry RJ.

PLoS One. 2014 Jun 6;9(6):e98843. doi: 10.1371/journal.pone.0098843. eCollection 2014.


Evolutionary analysis of the Sub1 gene cluster that confers submergence tolerance to domesticated rice.

Fukao T, Harris T, Bailey-Serres J.

Ann Bot. 2009 Jan;103(2):143-50. doi: 10.1093/aob/mcn172. Epub 2008 Sep 29.


Evolutionary Insights Based on SNP Haplotypes of Red Pericarp, Grain Size and Starch Synthase Genes in Wild and Cultivated Rice.

Singh N, Singh B, Rai V, Sidhu S, Singh AK, Singh NK.

Front Plant Sci. 2017 Jun 9;8:972. doi: 10.3389/fpls.2017.00972. eCollection 2017.

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