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Microbial Ecology of the Human Skin.

Cundell AM.

Microb Ecol. 2018 Jul;76(1):113-120. doi: 10.1007/s00248-016-0789-6. Epub 2016 May 31. Review.


Immune status, antibiotic medication and pH are associated with changes in the stomach fluid microbiota.

von Rosenvinge EC, Song Y, White JR, Maddox C, Blanchard T, Fricke WF.

ISME J. 2013 Jul;7(7):1354-66. doi: 10.1038/ismej.2013.33. Epub 2013 Mar 7.


Accessing the Hidden Microbial Diversity of Aphids: an Illustration of How Culture-Dependent Methods Can Be Used to Decipher the Insect Microbiota.

Grigorescu AS, Renoz F, Sabri A, Foray V, Hance T, Thonart P.

Microb Ecol. 2018 May;75(4):1035-1048. doi: 10.1007/s00248-017-1092-x. Epub 2017 Nov 9.


Optimisation of methods for bacterial skin microbiome investigation: primer selection and comparison of the 454 versus MiSeq platform.

Castelino M, Eyre S, Moat J, Fox G, Martin P, Ho P, Upton M, Barton A.

BMC Microbiol. 2017 Jan 21;17(1):23. doi: 10.1186/s12866-017-0927-4.


Topographic diversity of fungal and bacterial communities in human skin.

Findley K, Oh J, Yang J, Conlan S, Deming C, Meyer JA, Schoenfeld D, Nomicos E, Park M; NIH Intramural Sequencing Center Comparative Sequencing Program, Kong HH, Segre JA.

Nature. 2013 Jun 20;498(7454):367-70. doi: 10.1038/nature12171. Epub 2013 May 22.


Structure and function of the human skin microbiome.

Schommer NN, Gallo RL.

Trends Microbiol. 2013 Dec;21(12):660-8. doi: 10.1016/j.tim.2013.10.001. Epub 2013 Nov 12. Review.


Individual- and Species-Specific Skin Microbiomes in Three Different Estrildid Finch Species Revealed by 16S Amplicon Sequencing.

Engel K, Sauer J, Jünemann S, Winkler A, Wibberg D, Kalinowski J, Tauch A, Caspers BA.

Microb Ecol. 2018 Aug;76(2):518-529. doi: 10.1007/s00248-017-1130-8. Epub 2017 Dec 27.


Effects of host species and environment on the skin microbiome of Plethodontid salamanders.

Muletz Wolz CR, Yarwood SA, Campbell Grant EH, Fleischer RC, Lips KR.

J Anim Ecol. 2018 Mar;87(2):341-353. doi: 10.1111/1365-2656.12726. Epub 2017 Aug 21.


Bacterial and fungal core microbiomes associated with small grain silages during ensiling and aerobic spoilage.

Duniere L, Xu S, Long J, Elekwachi C, Wang Y, Turkington K, Forster R, McAllister TA.

BMC Microbiol. 2017 Mar 3;17(1):50. doi: 10.1186/s12866-017-0947-0.


The altered landscape of the human skin microbiome in patients with primary immunodeficiencies.

Oh J, Freeman AF; NISC Comparative Sequencing Program, Park M, Sokolic R, Candotti F, Holland SM, Segre JA, Kong HH.

Genome Res. 2013 Dec;23(12):2103-14. doi: 10.1101/gr.159467.113. Epub 2013 Oct 29.


Molecular analysis of the prevalent microbiota of human male and female forehead skin compared to forearm skin and the influence of make-up.

Staudinger T, Pipal A, Redl B.

J Appl Microbiol. 2011 Jun;110(6):1381-9. doi: 10.1111/j.1365-2672.2011.04991.x. Epub 2011 Mar 17.


Cutaneous microbiome studies in the times of affordable sequencing.

Tomic-Canic M, Perez-Perez GI, Blumenberg M.

J Dermatol Sci. 2014 Aug;75(2):82-7. doi: 10.1016/j.jdermsci.2014.05.001. Epub 2014 May 23.


Nested PCR-denaturing gradient gel electrophoresis analysis of human skin microbial diversity with age.

Li W, Han L, Yu P, Ma C, Wu X, Xu J.

Microbiol Res. 2014 Sep-Oct;169(9-10):686-92. doi: 10.1016/j.micres.2014.02.008. Epub 2014 Mar 1.


Fungal and Bacterial Diversity of Airway Microbiota in Adults with Cystic Fibrosis: Concordance Between Conventional Methods and Ultra-Deep Sequencing, and Their Practical use in the Clinical Laboratory.

Botterel F, Angebault C, Cabaret O, Stressmann FA, Costa JM, Wallet F, Wallaert B, Bruce K, Delhaes L.

Mycopathologia. 2018 Feb;183(1):171-183. doi: 10.1007/s11046-017-0185-x. Epub 2017 Aug 1.


Effects of cosmetics on the skin microbiome of facial cheeks with different hydration levels.

Lee HJ, Jeong SE, Lee S, Kim S, Han H, Jeon CO.

Microbiologyopen. 2018 Apr;7(2):e00557. doi: 10.1002/mbo3.557. Epub 2017 Nov 29.


Profile of the skin microbiota in a healthy Chinese population.

Zhai W, Huang Y, Zhang X, Fei W, Chang Y, Cheng S, Zhou Y, Gao J, Tang X, Zhang X, Yang S.

J Dermatol. 2018 Nov;45(11):1289-1300. doi: 10.1111/1346-8138.14594. Epub 2018 Sep 5.


Resistance and resilience of the forest soil microbiome to logging-associated compaction.

Hartmann M, Niklaus PA, Zimmermann S, Schmutz S, Kremer J, Abarenkov K, Lüscher P, Widmer F, Frey B.

ISME J. 2014 Jan;8(1):226-44. doi: 10.1038/ismej.2013.141. Epub 2013 Sep 12.


Microbial ecology of the skin in the era of metagenomics and molecular microbiology.

Hannigan GD, Grice EA.

Cold Spring Harb Perspect Med. 2013 Dec 1;3(12):a015362. doi: 10.1101/cshperspect.a015362. Review.


Sequencing the human microbiome in health and disease.

Cox MJ, Cookson WO, Moffatt MF.

Hum Mol Genet. 2013 Oct 15;22(R1):R88-94. doi: 10.1093/hmg/ddt398. Epub 2013 Aug 13. Review.


Characterization of the Axillary Microbiota of Japanese Male Subjects with Spicy and Milky Odor Types by Pyrosequencing.

Okamoto H, Koizumi S, Shimizu H, Cho O, Sugita T.

Biocontrol Sci. 2018;23(1):1-5. doi: 10.4265/bio.23.1.

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