Format
Sort by
Items per page

Send to

Choose Destination

Links from PubMed

Items: 1 to 20 of 30

1.

Corrigendum: Open access resources for genome-wide association mapping in rice.

McCouch SR, Wright MH, Tung CW, Maron LG, McNally KL, Fitzgerald M, Singh N, DeClerck G, Perez FA, Korniliev P, Greenberg AJ, Naredo ME, Mercado SM, Harrington SE, Shi Y, Branchini DA, Kuser-Falcão PR, Leung H, Ebana K, Yano M, Eizenga G, McClung A, Mezey J.

Nat Commun. 2016 Apr 20;7:11346. doi: 10.1038/ncomms11346. No abstract available.

2.

Genome-wide association mapping reveals a rich genetic architecture of complex traits in Oryza sativa.

Zhao K, Tung CW, Eizenga GC, Wright MH, Ali ML, Price AH, Norton GJ, Islam MR, Reynolds A, Mezey J, McClung AM, Bustamante CD, McCouch SR.

Nat Commun. 2011 Sep 13;2:467. doi: 10.1038/ncomms1467.

3.

From mapping to sequencing, post-sequencing and beyond.

Sasaki T, Matsumoto T, Antonio BA, Nagamura Y.

Plant Cell Physiol. 2005 Jan;46(1):3-13. Epub 2005 Jan 19. Review.

PMID:
15659433
4.

Rice at the forefront of plant genome informatics.

Antonio BA, Sakata K, Sasaki T.

Genome Inform Ser Workshop Genome Inform. 2000;11:3-11.

PMID:
11700582
5.

Resequencing rice genomes: an emerging new era of rice genomics.

Huang X, Lu T, Han B.

Trends Genet. 2013 Apr;29(4):225-32. doi: 10.1016/j.tig.2012.12.001. Epub 2013 Jan 4. Review.

PMID:
23295340
6.

Genome-wide Association Mapping of Quantitative Trait Loci (QTLs) for Contents of Eight Elements in Brown Rice (Oryza sativa L.).

Nawaz Z, Kakar KU, Li XB, Li S, Zhang B, Shou HX, Shu QY.

J Agric Food Chem. 2015 Sep 16;63(36):8008-16. doi: 10.1021/acs.jafc.5b01191. Epub 2015 Sep 8.

PMID:
26317332
7.

Sequencing-based genome-wide association study in rice.

Han B, Huang X.

Curr Opin Plant Biol. 2013 May;16(2):133-8. doi: 10.1016/j.pbi.2013.03.006. Epub 2013 Apr 4. Review.

PMID:
23562592
8.

Towards a better bowl of rice: assigning function to tens of thousands of rice genes.

Jung KH, An G, Ronald PC.

Nat Rev Genet. 2008 Feb;9(2):91-101. Review.

9.

Genomic selection and association mapping in rice (Oryza sativa): effect of trait genetic architecture, training population composition, marker number and statistical model on accuracy of rice genomic selection in elite, tropical rice breeding lines.

Spindel J, Begum H, Akdemir D, Virk P, Collard B, Redoña E, Atlin G, Jannink JL, McCouch SR.

PLoS Genet. 2015 Feb 17;11(2):e1004982. doi: 10.1371/journal.pgen.1004982. eCollection 2015 Feb. Erratum in: PLoS Genet. 2015 Jun;11(6):e1005350.

10.

Genome-Wide Association of Rice Blast Disease Resistance and Yield-Related Components of Rice.

Wang X, Jia MH, Ghai P, Lee FN, Jia Y.

Mol Plant Microbe Interact. 2015 Dec;28(12):1383-92. doi: 10.1094/MPMI-06-15-0131-R. Epub 2015 Oct 30.

11.

Bioinformatics for rice resources.

Sobral BW, Mangalam H, Siepel A, Mendes P, Pecherer R, McLaren G.

Novartis Found Symp. 2001;236:59-81; discussion 81-4. Review.

PMID:
11387987
12.

Genomic resources for functional analyses of the rice genome.

Yang Y, Li Y, Wu C.

Curr Opin Plant Biol. 2013 May;16(2):157-63. doi: 10.1016/j.pbi.2013.03.010. Epub 2013 Apr 6. Review.

PMID:
23571012
13.

Single nucleotide polymorphisms generated by genotyping by sequencing to characterize genome-wide diversity, linkage disequilibrium, and selective sweeps in cultivated watermelon.

Nimmakayala P, Levi A, Abburi L, Abburi VL, Tomason YR, Saminathan T, Vajja VG, Malkaram S, Reddy R, Wehner TC, Mitchell SE, Reddy UK.

BMC Genomics. 2014 Sep 8;15:767. doi: 10.1186/1471-2164-15-767.

14.

Genome-wide survey and comparative analysis of LTR retrotransposons and their captured genes in rice and sorghum.

Jiang SY, Ramachandran S.

PLoS One. 2013 Jul 29;8(7):e71118. doi: 10.1371/journal.pone.0071118. Print 2013.

15.

Genome-wide analysis of endosperm-specific genes in rice.

Nie DM, Ouyang YD, Wang X, Zhou W, Hu CG, Yao J.

Gene. 2013 Nov 10;530(2):236-47. doi: 10.1016/j.gene.2013.07.088. Epub 2013 Aug 13.

PMID:
23948082
16.

The Rice Annotation Project Database (RAP-DB): hub for Oryza sativa ssp. japonica genome information.

Ohyanagi H, Tanaka T, Sakai H, Shigemoto Y, Yamaguchi K, Habara T, Fujii Y, Antonio BA, Nagamura Y, Imanishi T, Ikeo K, Itoh T, Gojobori T, Sasaki T.

Nucleic Acids Res. 2006 Jan 1;34(Database issue):D741-4.

17.

Association analysis of the amino acid contents in rice.

Zhao W, Park EJ, Chung JW, Park YJ, Chung IM, Ahn JK, Kim GH.

J Integr Plant Biol. 2009 Dec;51(12):1126-37. doi: 10.1111/j.1744-7909.2009.00883.x.

PMID:
20021560
18.

Use of Nipponbare BAC clones for physical mapping of an R gene locus in rice.

Jeon JS, Ronald PC.

Methods Mol Biol. 2007;354:45-56.

PMID:
17172743
19.

Genome-wide transcription analyses in rice using tiling microarrays.

Li L, Wang X, Stolc V, Li X, Zhang D, Su N, Tongprasit W, Li S, Cheng Z, Wang J, Deng XW.

Nat Genet. 2006 Jan;38(1):124-9. Epub 2005 Dec 20.

PMID:
16369532
20.

Genome-wide association mapping in tomato (Solanum lycopersicum) is possible using genome admixture of Solanum lycopersicum var. cerasiforme.

Ranc N, Muños S, Xu J, Le Paslier MC, Chauveau A, Bounon R, Rolland S, Bouchet JP, Brunel D, Causse M.

G3 (Bethesda). 2012 Aug;2(8):853-64. doi: 10.1534/g3.112.002667. Epub 2012 Aug 1.

Supplemental Content

Support Center