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Items: 1 to 20 of 137

1.

Insights into Peptoid Helix Folding Cooperativity from an Improved Backbone Potential.

Mukherjee S, Zhou G, Michel C, Voelz VA.

J Phys Chem B. 2015 Dec 17;119(50):15407-17. doi: 10.1021/acs.jpcb.5b09625. Epub 2015 Dec 4.

PMID:
26584227
2.

Extraordinarily robust polyproline type I peptoid helices generated via the incorporation of α-chiral aromatic N-1-naphthylethyl side chains.

Stringer JR, Crapster JA, Guzei IA, Blackwell HE.

J Am Chem Soc. 2011 Oct 5;133(39):15559-67. doi: 10.1021/ja204755p. Epub 2011 Sep 13.

4.

Peptoid conformational free energy landscapes from implicit-solvent molecular simulations in AMBER.

Voelz VA, Dill KA, Chorny I.

Biopolymers. 2011;96(5):639-50. doi: 10.1002/bip.21575.

PMID:
21184487
5.

Structural and spectroscopic studies of peptoid oligomers with alpha-chiral aliphatic side chains.

Wu CW, Kirshenbaum K, Sanborn TJ, Patch JA, Huang K, Dill KA, Zuckermann RN, Barron AE.

J Am Chem Soc. 2003 Nov 5;125(44):13525-30.

PMID:
14583049
6.

De novo structure prediction and experimental characterization of folded peptoid oligomers.

Butterfoss GL, Yoo B, Jaworski JN, Chorny I, Dill KA, Zuckermann RN, Bonneau R, Kirshenbaum K, Voelz VA.

Proc Natl Acad Sci U S A. 2012 Sep 4;109(36):14320-5. doi: 10.1073/pnas.1209945109. Epub 2012 Aug 20.

7.

Synthesis and characterization of nitroaromatic peptoids: fine tuning peptoid secondary structure through monomer position and functionality.

Fowler SA, Luechapanichkul R, Blackwell HE.

J Org Chem. 2009 Feb 20;74(4):1440-9. doi: 10.1021/jo8023363.

8.

Peptoid oligomers with alpha-chiral, aromatic side chains: sequence requirements for the formation of stable peptoid helices.

Wu CW, Sanborn TJ, Huang K, Zuckermann RN, Barron AE.

J Am Chem Soc. 2001 Jul 18;123(28):6778-84.

PMID:
11448181
9.
10.

α-Aminoxy Peptoids: A Unique Peptoid Backbone with a Preference for cis-Amide Bonds.

Krieger V, Ciglia E, Thoma R, Vasylyeva V, Frieg B, de Sousa Amadeu N, Kurz T, Janiak C, Gohlke H, Hansen FK.

Chemistry. 2017 Mar 13;23(15):3699-3707. doi: 10.1002/chem.201605100. Epub 2017 Feb 13.

PMID:
28090689
11.

A rotamer library to enable modeling and design of peptoid foldamers.

Renfrew PD, Craven TW, Butterfoss GL, Kirshenbaum K, Bonneau R.

J Am Chem Soc. 2014 Jun 18;136(24):8772-82. doi: 10.1021/ja503776z. Epub 2014 Jun 9.

12.

New strategies for the design of folded peptoids revealed by a survey of noncovalent interactions in model systems.

Gorske BC, Stringer JR, Bastian BL, Fowler SA, Blackwell HE.

J Am Chem Soc. 2009 Nov 18;131(45):16555-67. doi: 10.1021/ja907184g.

13.

β-Peptoid Foldamers at Last.

Laursen JS, Engel-Andreasen J, Olsen CA.

Acc Chem Res. 2015 Oct 20;48(10):2696-704. doi: 10.1021/acs.accounts.5b00257. Epub 2015 Jul 15.

14.

Structural and dynamical characteristics of peptoid oligomers with achiral aliphatic side chains studied by molecular dynamics simulation.

Park SH, Szleifer I.

J Phys Chem B. 2011 Sep 22;115(37):10967-75. doi: 10.1021/jp2025957. Epub 2011 Aug 30.

15.

Peptoid oligomers with alpha-chiral, aromatic side chains: effects of chain length on secondary structure.

Wu CW, Sanborn TJ, Zuckermann RN, Barron AE.

J Am Chem Soc. 2001 Apr 4;123(13):2958-63.

PMID:
11457005
16.

Helices in peptoids of alpha- and beta-peptides.

Baldauf C, Günther R, Hofmann HJ.

Phys Biol. 2006 Feb 2;3(1):S1-9. Review.

PMID:
16582460
17.

"Bridged" n→π* interactions can stabilize peptoid helices.

Gorske BC, Nelson RC, Bowden ZS, Kufe TA, Childs AM.

J Org Chem. 2013 Nov 15;78(22):11172-83. doi: 10.1021/jo4014113. Epub 2013 Nov 4.

PMID:
24050840
18.

Solid-phase submonomer synthesis of peptoid polymers and their self-assembly into highly-ordered nanosheets.

Tran H, Gael SL, Connolly MD, Zuckermann RN.

J Vis Exp. 2011 Nov 2;(57):e3373. doi: 10.3791/3373.

19.

Structural characterization of a peptoid with lysine-like side chains and biological activity using NMR and computational methods.

Sternberg U, Birtalan E, Jakovkin I, Luy B, Schepers U, Bräse S, Muhle-Goll C.

Org Biomol Chem. 2013 Jan 28;11(4):640-7. doi: 10.1039/c2ob27039k. Epub 2012 Dec 5.

PMID:
23223799
20.

Development and use of an atomistic CHARMM-based forcefield for peptoid simulation.

Mirijanian DT, Mannige RV, Zuckermann RN, Whitelam S.

J Comput Chem. 2014 Feb 15;35(5):360-70. doi: 10.1002/jcc.23478. Epub 2013 Nov 29.

PMID:
24293222

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