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Items: 7

1.

Detecting miRNA Mentions and Relations in Biomedical Literature.

Bagewadi S, Bobić T, Hofmann-Apitius M, Fluck J, Klinger R.

Version 3. F1000Res. 2014 Aug 28 [revised 2015 Jan 1];3:205. doi: 10.12688/f1000research.4591.3. eCollection 2014.

2.

Challenges in the association of human single nucleotide polymorphism mentions with unique database identifiers.

Thomas PE, Klinger R, Furlong LI, Hofmann-Apitius M, Friedrich CM.

BMC Bioinformatics. 2011;12 Suppl 4:S4. doi: 10.1186/1471-2105-12-S4-S4. Epub 2011 Jul 5.

3.

Identification of histone modifications in biomedical text for supporting epigenomic research.

Kolárik C, Klinger R, Hofmann-Apitius M.

BMC Bioinformatics. 2009 Jan 30;10 Suppl 1:S28. doi: 10.1186/1471-2105-10-S1-S28.

4.

Overview of BioCreative II gene mention recognition.

Smith L, Tanabe LK, Ando RJ, Kuo CJ, Chung IF, Hsu CN, Lin YS, Klinger R, Friedrich CM, Ganchev K, Torii M, Liu H, Haddow B, Struble CA, Povinelli RJ, Vlachos A, Baumgartner WA Jr, Hunter L, Carpenter B, Tsai RT, Dai HJ, Liu F, Chen Y, Sun C, Katrenko S, Adriaans P, Blaschke C, Torres R, Neves M, Nakov P, Divoli A, Maña-López M, Mata J, Wilbur WJ.

Genome Biol. 2008;9 Suppl 2:S2. doi: 10.1186/gb-2008-9-s2-s2. Epub 2008 Sep 1.

5.

Detection of IUPAC and IUPAC-like chemical names.

Klinger R, Kolárik C, Fluck J, Hofmann-Apitius M, Friedrich CM.

Bioinformatics. 2008 Jul 1;24(13):i268-76. doi: 10.1093/bioinformatics/btn181.

6.

Knowledge environments representing molecular entities for the virtual physiological human.

Hofmann-Apitius M, Fluck J, Furlong L, Fornes O, Kolárik C, Hanser S, Boeker M, Schulz S, Sanz F, Klinger R, Mevissen T, Gattermayer T, Oliva B, Friedrich CM.

Philos Trans A Math Phys Eng Sci. 2008 Sep 13;366(1878):3091-110. doi: 10.1098/rsta.2008.0099.

7.

Identifying gene-specific variations in biomedical text.

Klinger R, Friedrich CM, Mevissen HT, Fluck J, Hofmann-Apitius M, Furlong LI, Sanz F.

J Bioinform Comput Biol. 2007 Dec;5(6):1277-96.

PMID:
18172929

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