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Items: 15

1.

Whole Genome Sequencing-Based Discovery of Structural Variants in Glioblastoma.

Wrzeszczynski KO, Felice V, Shah M, Rahman S, Emde AK, Jobanputra V, O Frank M, Darnell RB.

Methods Mol Biol. 2018;1741:1-29. doi: 10.1007/978-1-4939-7659-1_1.

PMID:
29392687
2.

Pancreatic intraductal tubulopapillary neoplasm is genetically distinct from intraductal papillary mucinous neoplasm and ductal adenocarcinoma.

Basturk O, Berger MF, Yamaguchi H, Adsay V, Askan G, Bhanot UK, Zehir A, Carneiro F, Hong SM, Zamboni G, Dikoglu E, Jobanputra V, Wrzeszczynski KO, Balci S, Allen P, Ikari N, Takeuchi S, Akagawa H, Kanno A, Shimosegawa T, Morikawa T, Motoi F, Unno M, Higuchi R, Yamamoto M, Shimizu K, Furukawa T, Klimstra DS.

Mod Pathol. 2017 Dec;30(12):1760-1772. doi: 10.1038/modpathol.2017.60. Epub 2017 Aug 4.

PMID:
28776573
3.

Comparing sequencing assays and human-machine analyses in actionable genomics for glioblastoma.

Wrzeszczynski KO, Frank MO, Koyama T, Rhrissorrakrai K, Robine N, Utro F, Emde AK, Chen BJ, Arora K, Shah M, Vacic V, Norel R, Bilal E, Bergmann EA, Moore Vogel JL, Bruce JN, Lassman AB, Canoll P, Grommes C, Harvey S, Parida L, Michelini VV, Zody MC, Jobanputra V, Royyuru AK, Darnell RB.

Neurol Genet. 2017 Jul 11;3(4):e164. doi: 10.1212/NXG.0000000000000164. eCollection 2017 Aug.

4.

The oncocytic subtype is genetically distinct from other pancreatic intraductal papillary mucinous neoplasm subtypes.

Basturk O, Tan M, Bhanot U, Allen P, Adsay V, Scott SN, Shah R, Berger MF, Askan G, Dikoglu E, Jobanputra V, Wrzeszczynski KO, Sigel C, Iacobuzio-Donahue C, Klimstra DS.

Mod Pathol. 2016 Sep;29(9):1058-69. doi: 10.1038/modpathol.2016.98. Epub 2016 Jun 10.

5.

A quantitative proteomics-based signature of platinum sensitivity in ovarian cancer cell lines.

Fan G, Wrzeszczynski KO, Fu C, Su G, Pappin DJ, Lucito R, Tonks NK.

Biochem J. 2015 Feb 1;465(3):433-42. doi: 10.1042/BJ20141087.

6.

Integrative prediction of gene function and platinum-free survival from genomic and epigenetic features in ovarian cancer.

Wrzeszczynski KO, Varadan V, Kamalakaran S, Levine DA, Dimitrova N, Lucito R.

Methods Mol Biol. 2013;1049:35-51. doi: 10.1007/978-1-62703-547-7_4.

PMID:
23913207
7.

Loss of DOK2 induces carboplatin resistance in ovarian cancer via suppression of apoptosis.

Lum E, Vigliotti M, Banerjee N, Cutter N, Wrzeszczynski KO, Khan S, Kamalakaran S, Levine DA, Dimitrova N, Lucito R.

Gynecol Oncol. 2013 Aug;130(2):369-76. doi: 10.1016/j.ygyno.2013.05.002. Epub 2013 May 14.

8.

Identification of tumor suppressors and oncogenes from genomic and epigenetic features in ovarian cancer.

Wrzeszczynski KO, Varadan V, Byrnes J, Lum E, Kamalakaran S, Levine DA, Dimitrova N, Zhang MQ, Lucito R.

PLoS One. 2011;6(12):e28503. doi: 10.1371/journal.pone.0028503. Epub 2011 Dec 8.

9.

Functional mutation of SMAC/DIABLO, encoding a mitochondrial proapoptotic protein, causes human progressive hearing loss DFNA64.

Cheng J, Zhu Y, He S, Lu Y, Chen J, Han B, Petrillo M, Wrzeszczynski KO, Yang S, Dai P, Zhai S, Han D, Zhang MQ, Li W, Liu X, Li H, Chen ZY, Yuan H.

Am J Hum Genet. 2011 Jul 15;89(1):56-66. doi: 10.1016/j.ajhg.2011.05.027. Epub 2011 Jun 30.

10.

Physical protein-protein interactions predicted from microarrays.

Soong TT, Wrzeszczynski KO, Rost B.

Bioinformatics. 2008 Nov 15;24(22):2608-14. doi: 10.1093/bioinformatics/btn498. Epub 2008 Oct 1.

11.

Cell cycle kinases predicted from conserved biophysical properties.

Wrzeszczynski KO, Rost B.

Proteins. 2009 Feb 15;74(3):655-68. doi: 10.1002/prot.22181.

12.

Annotating proteins from endoplasmic reticulum and Golgi apparatus in eukaryotic proteomes.

Wrzeszczynski KO, Rost B.

Cell Mol Life Sci. 2004 Jun;61(11):1341-53.

PMID:
15170512
13.

Cataloging proteins in cell cycle control.

Wrzeszczynski KO, Rost B.

Methods Mol Biol. 2004;241:219-33. No abstract available.

PMID:
14970657
14.

Automatic prediction of protein function.

Rost B, Liu J, Nair R, Wrzeszczynski KO, Ofran Y.

Cell Mol Life Sci. 2003 Dec;60(12):2637-50. Review.

PMID:
14685688

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