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Genomics-Informed Insights into Endosymbiotic Organelle Evolution in Photosynthetic Eukaryotes.

Nowack ECM, Weber APM.

Annu Rev Plant Biol. 2018 Feb 28. doi: 10.1146/annurev-arplant-042817-040209. [Epub ahead of print]


Uncoupling proteins 1 and 2 (UCP1 and UCP2) from Arabidopsis thaliana are mitochondrial transporters of aspartate, glutamate and dicarboxylates.

Monné M, Daddabbo L, Gagneul D, Obata T, Hielscher B, Palmieri L, Miniero DV, Fernie AR, Weber APM, Palmieri F.

J Biol Chem. 2018 Jan 25. pii: jbc.RA117.000771. doi: 10.1074/jbc.RA117.000771. [Epub ahead of print]


The Impacts of Fluctuating Light on Crop Performance.

Slattery RA, Walker BJ, Weber APM, Ort DR.

Plant Physiol. 2018 Feb;176(2):990-1003. doi: 10.1104/pp.17.01234. Epub 2017 Nov 30.


The Influence of a Cryptochrome on the Gene Expression Profile in the Diatom Phaeodactylum tricornutum under Blue Light and in Darkness.

König S, Eisenhut M, Bräutigam A, Kurz S, Weber APM, Büchel C.

Plant Cell Physiol. 2017 Nov 1;58(11):1914-1923. doi: 10.1093/pcp/pcx127.


Sometimes a rocker-switch motion.

Fischer K, Weber APM.

Nat Plants. 2017 Oct;3(10):771-772. doi: 10.1038/s41477-017-0026-4. No abstract available.


In Vitro Analysis of Metabolite Transport Proteins.

Roell MS, Kuhnert F, Zamani-Nour S, Weber APM.

Methods Mol Biol. 2017;1653:83-96. doi: 10.1007/978-1-4939-7225-8_6.


Transcriptional response of the extremophile red alga Cyanidioschyzon merolae to changes in CO2 concentrations.

Rademacher N, Wrobel TJ, Rossoni AW, Kurz S, Bräutigam A, Weber APM, Eisenhut M.

J Plant Physiol. 2017 Oct;217:49-56. doi: 10.1016/j.jplph.2017.06.014. Epub 2017 Jul 4.


Characterization of the Polycomb-Group Mark H3K27me3 in Unicellular Algae.

Mikulski P, Komarynets O, Fachinelli F, Weber APM, Schubert D.

Front Plant Sci. 2017 Apr 26;8:607. doi: 10.3389/fpls.2017.00607. eCollection 2017.


Machine Learning Techniques for Predicting Crop Photosynthetic Capacity from Leaf Reflectance Spectra.

Heckmann D, Schlüter U, Weber APM.

Mol Plant. 2017 Jun 5;10(6):878-890. doi: 10.1016/j.molp.2017.04.009. Epub 2017 Apr 28.


Metabolic Adaptation, a Specialized Leaf Organ Structure and Vascular Responses to Diurnal N2 Fixation by Nostoc azollae Sustain the Astonishing Productivity of Azolla Ferns without Nitrogen Fertilizer.

Brouwer P, Bräutigam A, Buijs VA, Tazelaar AO, van der Werf A, Schlüter U, Reichart GJ, Bolger A, Usadel B, Weber AP, Schluepmann H.

Front Plant Sci. 2017 Mar 31;8:442. doi: 10.3389/fpls.2017.00442. eCollection 2017.


Melatonin pretreatment improves gastric mucosal blood flow and maintains intestinal barrier function during hemorrhagic shock in dogs.

Vollmer C, Weber APM, Wallenfang M, Hoffmann T, Mettler-Altmann T, Truse R, Bauer I, Picker O, Mathes AM.

Microcirculation. 2017 May;24(4). doi: 10.1111/micc.12345.


An Efficient Visual Screen for CRISPR/Cas9 Activity in Arabidopsis thaliana.

Hahn F, Mantegazza O, Greiner A, Hegemann P, Eisenhut M, Weber AP.

Front Plant Sci. 2017 Jan 24;8:39. doi: 10.3389/fpls.2017.00039. eCollection 2017.


The Synechocystis Manganese Exporter Mnx Is Essential for Manganese Homeostasis in Cyanobacteria.

Brandenburg F, Schoffman H, Kurz S, Krämer U, Keren N, Weber AP, Eisenhut M.

Plant Physiol. 2017 Mar;173(3):1798-1810. doi: 10.1104/pp.16.01895. Epub 2017 Jan 30.


Photosynthesis in C3-C4 intermediate Moricandia species.

Schlüter U, Bräutigam A, Gowik U, Melzer M, Christin PA, Kurz S, Mettler-Altmann T, Weber AP.

J Exp Bot. 2017 Jan;68(2):191-206. doi: 10.1093/jxb/erw391. Epub 2016 Oct 19.


Biotic Host-Pathogen Interactions As Major Drivers of Plastid Endosymbiosis.

Cenci U, Bhattacharya D, Weber APM, Colleoni C, Subtil A, Ball SG.

Trends Plant Sci. 2017 Apr;22(4):316-328. doi: 10.1016/j.tplants.2016.12.007. Epub 2017 Jan 12. Review.


Freeze-quenched maize mesophyll and bundle sheath separation uncovers bias in previous tissue-specific RNA-Seq data.

Denton AK, Maß J, Külahoglu C, Lercher MJ, Bräutigam A, Weber AP.

J Exp Bot. 2017 Jan;68(2):147-160. doi: 10.1093/jxb/erw463. Epub 2017 Jan 2.


Overexpression of the triose phosphate translocator (TPT) complements the abnormal metabolism and development of plastidial glycolytic glyceraldehyde-3-phosphate dehydrogenase mutants.

Flores-Tornero M, Anoman AD, Rosa-Téllez S, Toujani W, Weber AP, Eisenhut M, Kurz S, Alseekh S, Fernie AR, Muñoz-Bertomeu J, Ros R.

Plant J. 2017 Mar;89(6):1146-1158. doi: 10.1111/tpj.13452. Epub 2017 Feb 11.


Surveying the Oligomeric State of Arabidopsis thaliana Chloroplasts.

Lundquist PK, Mantegazza O, Stefanski A, Stühler K, Weber APM.

Mol Plant. 2017 Jan 9;10(1):197-211. doi: 10.1016/j.molp.2016.10.011. Epub 2016 Oct 26.


Entanglement and manipulation of the magnetic and spin-orbit order in multiferroic Rashba semiconductors.

Krempaský J, Muff S, Bisti F, Fanciulli M, Volfová H, Weber AP, Pilet N, Warnicke P, Ebert H, Braun J, Bertran F, Volobuev VV, Minár J, Springholz G, Dil JH, Strocov VN.

Nat Commun. 2016 Oct 21;7:13071. doi: 10.1038/ncomms13071.


Photorespiration Is Crucial for Dynamic Response of Photosynthetic Metabolism and Stomatal Movement to Altered CO2 Availability.

Eisenhut M, Bräutigam A, Timm S, Florian A, Tohge T, Fernie AR, Bauwe H, Weber APM.

Mol Plant. 2017 Jan 9;10(1):47-61. doi: 10.1016/j.molp.2016.09.011. Epub 2016 Oct 1.


Synthesis of Spherical Carbon Nitride-Based Polymer Composites by Continuous Aerosol-Photopolymerization with Efficient Light Harvesting.

Poostforooshan J, Badiei A, Kolahdouz M, Weber AP.

ACS Appl Mater Interfaces. 2016 Aug 24;8(33):21731-41. doi: 10.1021/acsami.6b07909. Epub 2016 Aug 11.


Systems analysis of cis-regulatory motifs in C4 photosynthesis genes using maize and rice leaf transcriptomic data during a process of de-etiolation.

Xu J, Bräutigam A, Weber AP, Zhu XG.

J Exp Bot. 2016 Sep;67(17):5105-17. doi: 10.1093/jxb/erw275. Epub 2016 Jul 19. Erratum in: J Exp Bot. 2017 May 17;68(11):3035.


Future Research into C4 Biology.

Taniguchi M, Weber AP, von Caemmerer S.

Plant Cell Physiol. 2016 May;57(5):879-80. doi: 10.1093/pcp/pcw082. No abstract available.


Infection and the first eukaryotes--Response.

Ball SG, Bhattacharya D, Weber AP.

Science. 2016 May 27;352(6289):1065-6. doi: 10.1126/science.aaf6733. No abstract available.


Comparative genomics explains the evolutionary success of reef-forming corals.

Bhattacharya D, Agrawal S, Aranda M, Baumgarten S, Belcaid M, Drake JL, Erwin D, Foret S, Gates RD, Gruber DF, Kamel B, Lesser MP, Levy O, Liew YJ, MacManes M, Mass T, Medina M, Mehr S, Meyer E, Price DC, Putnam HM, Qiu H, Shinzato C, Shoguchi E, Stokes AJ, Tambutté S, Tchernov D, Voolstra CR, Wagner N, Walker CW, Weber AP, Weis V, Zelzion E, Zoccola D, Falkowski PG.

Elife. 2016 May 24;5. pii: e13288. doi: 10.7554/eLife.13288.


The Peroxisomal NAD Carrier from Arabidopsis Imports NAD in Exchange with AMP.

van Roermund CW, Schroers MG, Wiese J, Facchinelli F, Kurz S, Wilkinson S, Charton L, Wanders RJ, Waterham HR, Weber AP, Link N.

Plant Physiol. 2016 Jul;171(3):2127-39. doi: 10.1104/pp.16.00540. Epub 2016 May 2.


Venus flytrap carnivorous lifestyle builds on herbivore defense strategies.

Bemm F, Becker D, Larisch C, Kreuzer I, Escalante-Perez M, Schulze WX, Ankenbrand M, Van de Weyer AL, Krol E, Al-Rasheid KA, Mithöfer A, Weber AP, Schultz J, Hedrich R.

Genome Res. 2016 Jun;26(6):812-25. doi: 10.1101/gr.202200.115. Epub 2016 May 4.


Commentary: Plastid establishment did not require a chlamydial partner.

Ball SG, Bhattacharya D, Qiu H, Weber AP.

Front Cell Infect Microbiol. 2016 Apr 13;6:43. doi: 10.3389/fcimb.2016.00043. eCollection 2016. No abstract available.


Perspectives for a better understanding of the metabolic integration of photorespiration within a complex plant primary metabolism network.

Hodges M, Dellero Y, Keech O, Betti M, Raghavendra AS, Sage R, Zhu XG, Allen DK, Weber AP.

J Exp Bot. 2016 May;67(10):3015-26. doi: 10.1093/jxb/erw145. Epub 2016 Apr 6. Review.


The Evolutionarily Conserved Protein PHOTOSYNTHESIS AFFECTED MUTANT71 Is Required for Efficient Manganese Uptake at the Thylakoid Membrane in Arabidopsis.

Schneider A, Steinberger I, Herdean A, Gandini C, Eisenhut M, Kurz S, Morper A, Hoecker N, Rühle T, Labs M, Flügge UI, Geimer S, Schmidt SB, Husted S, Weber AP, Spetea C, Leister D.

Plant Cell. 2016 Apr;28(4):892-910. doi: 10.1105/tpc.15.00812. Epub 2016 Mar 28.


Photorespiratory glycolate oxidase is essential for the survival of the red alga Cyanidioschyzon merolae under ambient CO2 conditions.

Rademacher N, Kern R, Fujiwara T, Mettler-Altmann T, Miyagishima SY, Hagemann M, Eisenhut M, Weber AP.

J Exp Bot. 2016 May;67(10):3165-75. doi: 10.1093/jxb/erw118. Epub 2016 Mar 19.


Manipulating photorespiration to increase plant productivity: recent advances and perspectives for crop improvement.

Betti M, Bauwe H, Busch FA, Fernie AR, Keech O, Levey M, Ort DR, Parry MA, Sage R, Timm S, Walker B, Weber AP.

J Exp Bot. 2016 May;67(10):2977-88. doi: 10.1093/jxb/erw076. Epub 2016 Mar 7. Review.


Engineering C4 photosynthesis into C3 chassis in the synthetic biology age.

Schuler ML, Mantegazza O, Weber AP.

Plant J. 2016 Jul;87(1):51-65. doi: 10.1111/tpj.13155. Epub 2016 Apr 18. Review.


Evolution of photorespiration from cyanobacteria to land plants, considering protein phylogenies and acquisition of carbon concentrating mechanisms.

Hagemann M, Kern R, Maurino VG, Hanson DT, Weber AP, Sage RF, Bauwe H.

J Exp Bot. 2016 May;67(10):2963-76. doi: 10.1093/jxb/erw063. Epub 2016 Mar 1. Review.


EVOLUTION. Pathogen to powerhouse.

Ball SG, Bhattacharya D, Weber AP.

Science. 2016 Feb 12;351(6274):659-60. doi: 10.1126/science.aad8864. No abstract available.


The Road to C4 Photosynthesis: Evolution of a Complex Trait via Intermediary States.

Schlüter U, Weber AP.

Plant Cell Physiol. 2016 May;57(5):881-9. doi: 10.1093/pcp/pcw009. Epub 2016 Feb 17. Review.


Balancing of B6 Vitamers Is Essential for Plant Development and Metabolism in Arabidopsis.

Colinas M, Eisenhut M, Tohge T, Pesquera M, Fernie AR, Weber AP, Fitzpatrick TB.

Plant Cell. 2016 Feb;28(2):439-53. doi: 10.1105/tpc.15.01033. Epub 2016 Feb 8.


Post-Plasma SiOx Coatings of Metal and Metal Oxide Nanoparticles for Enhanced Thermal Stability and Tunable Photoactivity Applications.

Post P, Jidenko N, Weber AP, Borra JP.

Nanomaterials (Basel). 2016 May 13;6(5). pii: E91. doi: 10.3390/nano6050091.


Reversible Burst of Transcriptional Changes during Induction of Crassulacean Acid Metabolism in Talinum triangulare.

Brilhaus D, Bräutigam A, Mettler-Altmann T, Winter K, Weber AP.

Plant Physiol. 2016 Jan;170(1):102-22. doi: 10.1104/pp.15.01076. Epub 2015 Nov 3.


Remobilization of Phytol from Chlorophyll Degradation Is Essential for Tocopherol Synthesis and Growth of Arabidopsis.

Vom Dorp K, Hölzl G, Plohmann C, Eisenhut M, Abraham M, Weber AP, Hanson AD, Dörmann P.

Plant Cell. 2015 Oct;27(10):2846-59. doi: 10.1105/tpc.15.00395. Epub 2015 Oct 9.


Discovering New Biology through Sequencing of RNA.

Weber AP.

Plant Physiol. 2015 Nov;169(3):1524-31. doi: 10.1104/pp.15.01081. Epub 2015 Sep 9.


Gapped Surface States in a Strong-Topological-Insulator Material.

Weber AP, Gibson QD, Ji H, Caruso AN, Fedorov AV, Cava RJ, Valla T.

Phys Rev Lett. 2015 Jun 26;114(25):256401. Epub 2015 Jun 23.


Redesigning photosynthesis to sustainably meet global food and bioenergy demand.

Ort DR, Merchant SS, Alric J, Barkan A, Blankenship RE, Bock R, Croce R, Hanson MR, Hibberd JM, Long SP, Moore TA, Moroney J, Niyogi KK, Parry MA, Peralta-Yahya PP, Prince RC, Redding KE, Spalding MH, van Wijk KJ, Vermaas WF, von Caemmerer S, Weber AP, Yeates TO, Yuan JS, Zhu XG.

Proc Natl Acad Sci U S A. 2015 Jul 14;112(28):8529-36. doi: 10.1073/pnas.1424031112. Epub 2015 Jun 29.


[Food insecurity and overweight in first grade students in the municipal school system in São Leopoldo, Rio Grande do Sul State, Brazil].

Vicenzi K, Henn RL, Weber AP, Backes V, Paniz VM, Donatti T, Olinto MT.

Cad Saude Publica. 2015 May;31(5):1084-94. doi: 10.1590/0102-311X00055914. Portuguese.


Metabolic connectivity as a driver of host and endosymbiont integration.

Karkar S, Facchinelli F, Price DC, Weber AP, Bhattacharya D.

Proc Natl Acad Sci U S A. 2015 Aug 18;112(33):10208-15. doi: 10.1073/pnas.1421375112. Epub 2015 Mar 30.


Extreme features of the Galdieria sulphuraria organellar genomes: a consequence of polyextremophily?

Jain K, Krause K, Grewe F, Nelson GF, Weber AP, Christensen AC, Mower JP.

Genome Biol Evol. 2014 Dec 30;7(1):367-80. doi: 10.1093/gbe/evu290.


Plastidial metabolite transporters integrate photorespiration with carbon, nitrogen, and sulfur metabolism.

Eisenhut M, Hocken N, Weber AP.

Cell Calcium. 2015 Jul;58(1):98-104. doi: 10.1016/j.ceca.2014.10.007. Epub 2014 Oct 29. Review.


Floridoside and isofloridoside are synthesized by trehalose 6-phosphate synthase-like enzymes in the red alga Galdieria sulphuraria.

Pade N, Linka N, Ruth W, Weber AP, Hagemann M.

New Phytol. 2015 Feb;205(3):1227-38. doi: 10.1111/nph.13108. Epub 2014 Oct 17.


Unknown components of the plastidial permeome.

Pick TR, Weber AP.

Front Plant Sci. 2014 Aug 19;5:410. doi: 10.3389/fpls.2014.00410. eCollection 2014. Review.


Absence of a proximity effect for a thin-films of a Bi2Se3 topological insulator grown on top of a Bi2Sr2CaCu2O(8+δ) cuprate superconductor.

Yilmaz T, Pletikosić I, Weber AP, Sadowski JT, Gu GD, Caruso AN, Sinkovic B, Valla T.

Phys Rev Lett. 2014 Aug 8;113(6):067003. Epub 2014 Aug 7.


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