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Items: 28


Molecular Epidemiology of HIV-1 Subtype B Reveals Heterogeneous Transmission Risk: Implications for Intervention and Control.

Volz EM, Le Vu S, Ratmann O, Tostevin A, Dunn D, Orkin C, O'Shea S, Delpech V, Brown A, Gill N, Fraser C; UK HIV Drug Resistance Database.

J Infect Dis. 2018 Feb 26. doi: 10.1093/infdis/jiy044. [Epub ahead of print]


Magnetic Macroporous Hydrogels as a Novel Approach for Perfused Stem Cell Culture in 3D Scaffolds via Contactless Motion Control.

Rödling L, Volz EM, Raic A, Brändle K, Franzreb M, Lee-Thedieck C.

Adv Healthc Mater. 2018 Jan 19. doi: 10.1002/adhm.201701403. [Epub ahead of print]


Comparison of cluster-based and source-attribution methods for estimating transmission risk using large HIV sequence databases.

Le Vu S, Ratmann O, Delpech V, Brown AE, Gill ON, Tostevin A, Fraser C, Volz EM.

Epidemics. 2017 Oct 20. pii: S1755-4365(17)30115-9. doi: 10.1016/j.epidem.2017.10.001. [Epub ahead of print]


Phylodynamic analysis to inform prevention efforts in mixed HIV epidemics.

Volz EM, Ndembi N, Nowak R, Kijak GH, Idoko J, Dakum P, Royal W, Baral S, Dybul M, Blattner WA, Charurat M.

Virus Evol. 2017 Jul 28;3(2):vex014. doi: 10.1093/ve/vex014. eCollection 2017 Jul.


Phylodynamic Inference across Epidemic Scales.

Volz EM, Romero-Severson E, Leitner T.

Mol Biol Evol. 2017 May 1;34(5):1276-1288. doi: 10.1093/molbev/msx077.


Sampling through time and phylodynamic inference with coalescent and birth-death models.

Volz EM, Frost SD.

J R Soc Interface. 2014 Dec 6;11(101):20140945.


Phylodynamic inference for structured epidemiological models.

Rasmussen DA, Volz EM, Koelle K.

PLoS Comput Biol. 2014 Apr 17;10(4):e1003570. doi: 10.1371/journal.pcbi.1003570. eCollection 2014 Apr.


A generating function approach to HIV transmission with dynamic contact rates.

Romero-Severson EO, Meadors GD, Volz EM.

Math Model Nat Phenom. 2014 Mar 1;9(2):121-135. Epub 2014 Apr 24.


Inferring the source of transmission with phylogenetic data.

Volz EM, Frost SD.

PLoS Comput Biol. 2013;9(12):e1003397. doi: 10.1371/journal.pcbi.1003397. Epub 2013 Dec 19.


HIV-1 transmission during early infection in men who have sex with men: a phylodynamic analysis.

Volz EM, Ionides E, Romero-Severson EO, Brandt MG, Mokotoff E, Koopman JS.

PLoS Med. 2013 Dec;10(12):e1001568; discussion e1001568. doi: 10.1371/journal.pmed.1001568. Epub 2013 Dec 10.


Share2Quit: Web-Based Peer-Driven Referrals for Smoking Cessation.

Sadasivam RS, Volz EM, Kinney RL, Rao SR, Houston TK.

JMIR Res Protoc. 2013 Sep 24;2(2):e37. doi: 10.2196/resprot.2786.


Episodic HIV Risk Behavior Can Greatly Amplify HIV Prevalence and the Fraction of Transmissions from Acute HIV Infection.

Zhang X, Zhong L, Romero-Severson E, Alam SJ, Henry CJ, Volz EM, Koopman JS.

Stat Commun Infect Dis. 2012 Nov 1;4(1). pii: 1041.


Incorporating disease and population structure into models of SIR disease in contact networks.

Miller JC, Volz EM.

PLoS One. 2013 Aug 19;8(8):e69162. doi: 10.1371/journal.pone.0069162. eCollection 2013.


Heterogeneity in Number and Type of Sexual Contacts in a Gay Urban Cohort.

Romero-Severson EO, Alam SJ, Volz EM, Koopman JS.

Stat Commun Infect Dis. 2012 Nov 4;4(1). pii: 4.


Viral phylodynamics.

Volz EM, Koelle K, Bedford T.

PLoS Comput Biol. 2013;9(3):e1002947. doi: 10.1371/journal.pcbi.1002947. Epub 2013 Mar 21. Review.


Detectable signals of episodic risk effects on acute HIV transmission: strategies for analyzing transmission systems using genetic data.

Alam SJ, Zhang X, Romero-Severson EO, Henry C, Zhong L, Volz EM, Brenner BG, Koopman JS.

Epidemics. 2013 Mar;5(1):44-55. doi: 10.1016/j.epidem.2012.11.003. Epub 2012 Nov 23.


Modelling tree shape and structure in viral phylodynamics.

Frost SD, Volz EM.

Philos Trans R Soc Lond B Biol Sci. 2013 Feb 4;368(1614):20120208. doi: 10.1098/rstb.2012.0208. Print 2013 Mar 19.


Model hierarchies in edge-based compartmental modeling for infectious disease spread.

Miller JC, Volz EM.

J Math Biol. 2013 Oct;67(4):869-99. doi: 10.1007/s00285-012-0572-3. Epub 2012 Aug 22.


Simple epidemiological dynamics explain phylogenetic clustering of HIV from patients with recent infection.

Volz EM, Koopman JS, Ward MJ, Brown AL, Frost SD.

PLoS Comput Biol. 2012;8(6):e1002552. doi: 10.1371/journal.pcbi.1002552. Epub 2012 Jun 28.


Complex population dynamics and the coalescent under neutrality.

Volz EM.

Genetics. 2012 Jan;190(1):187-201. doi: 10.1534/genetics.111.134627. Epub 2011 Oct 31. Erratum in: Genetics. 2013 Nov;195(3):1199.


Edge-based compartmental modelling for infectious disease spread.

Miller JC, Slim AC, Volz EM.

J R Soc Interface. 2012 May 7;9(70):890-906. doi: 10.1098/rsif.2011.0403. Epub 2011 Oct 5.


Effects of heterogeneous and clustered contact patterns on infectious disease dynamics.

Volz EM, Miller JC, Galvani A, Ancel Meyers L.

PLoS Comput Biol. 2011 Jun;7(6):e1002042. doi: 10.1371/journal.pcbi.1002042. Epub 2011 Jun 2. Erratum in: PLoS Comput Biol. 2011 Jul;7(7). doi: 10.1371/annotation/85b99614-44b4-4052-9195-a77d52dbdc05.


Viral phylodynamics and the search for an 'effective number of infections'.

Frost SD, Volz EM.

Philos Trans R Soc Lond B Biol Sci. 2010 Jun 27;365(1548):1879-90. doi: 10.1098/rstb.2010.0060.


Evolution of the coronary care unit: clinical characteristics and temporal trends in healthcare delivery and outcomes.

Katz JN, Shah BR, Volz EM, Horton JR, Shaw LK, Newby LK, Granger CB, Mark DB, Califf RM, Becker RC.

Crit Care Med. 2010 Feb;38(2):375-81. doi: 10.1097/CCM.0b013e3181cb0a63.


How to use diuretics in heart failure.

Volz EM, Felker GM.

Curr Treat Options Cardiovasc Med. 2009 Dec;11(6):426-32.


Phylodynamics of infectious disease epidemics.

Volz EM, Kosakovsky Pond SL, Ward MJ, Leigh Brown AJ, Frost SD.

Genetics. 2009 Dec;183(4):1421-30. doi: 10.1534/genetics.109.106021. Epub 2009 Sep 21.


Using respondent-driven sampling in a hidden population at risk of HIV infection: who do HIV-positive recruiters recruit?

Abramovitz D, Volz EM, Strathdee SA, Patterson TL, Vera A, Frost SD; Proyecto ElCuete.

Sex Transm Dis. 2009 Dec;36(12):750-6. doi: 10.1097/OLQ.0b013e3181b0f311.

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