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Items: 31

1.

Correction: Foxf Genes Integrate Tbx5 and Hedgehog Pathways in the Second Heart Field for Cardiac Septation.

Hoffmann AD, Yang XH, Burnicka-Turek O, Bosman JD, Ren X, Xie L, Steimle JD, Vokes SA, McMahon AP, Kalinichenko VV, Moskowitz IP.

PLoS Genet. 2016 Dec 29;12(12):e1006533. doi: 10.1371/journal.pgen.1006533. eCollection 2016 Dec.

2.

PRMT5 is essential for the maintenance of chondrogenic progenitor cells in the limb bud.

Norrie JL, Li Q, Co S, Huang BL, Ding D, Uy JC, Ji Z, Mackem S, Bedford MT, Galli A, Ji H, Vokes SA.

Development. 2016 Dec 15;143(24):4608-4619. Epub 2016 Nov 8.

3.

An interdigit signalling centre instructs coordinate phalanx-joint formation governed by 5'Hoxd-Gli3 antagonism.

Huang BL, Trofka A, Furusawa A, Norrie JL, Rabinowitz AH, Vokes SA, Mark Taketo M, Zakany J, Mackem S.

Nat Commun. 2016 Oct 7;7:12903. doi: 10.1038/ncomms12903.

4.

The Pluripotency Factor NANOG Binds to GLI Proteins and Represses Hedgehog-mediated Transcription.

Li Q, Lex RK, Chung H, Giovanetti SM, Ji Z, Ji H, Person MD, Kim J, Vokes SA.

J Biol Chem. 2016 Mar 25;291(13):7171-82. doi: 10.1074/jbc.M116.714857. Epub 2016 Jan 21.

5.

Turning publicly available gene expression data into discoveries using gene set context analysis.

Ji Z, Vokes SA, Dang CV, Ji H.

Nucleic Acids Res. 2016 Jan 8;44(1):e8. doi: 10.1093/nar/gkv873. Epub 2015 Sep 8.

6.

Spatiotemporal regulation of GLI target genes in the mammalian limb bud.

Lewandowski JP, Du F, Zhang S, Powell MB, Falkenstein KN, Ji H, Vokes SA.

Dev Biol. 2015 Oct 1;406(1):92-103. doi: 10.1016/j.ydbio.2015.07.022. Epub 2015 Jul 31.

7.

Foxf genes integrate tbx5 and hedgehog pathways in the second heart field for cardiac septation.

Hoffmann AD, Yang XH, Burnicka-Turek O, Bosman JD, Ren X, Steimle JD, Vokes SA, McMahon AP, Kalinichenko VV, Moskowitz IP.

PLoS Genet. 2014 Oct 30;10(10):e1004604. doi: 10.1371/journal.pgen.1004604. eCollection 2014 Oct. Erratum in: PLoS Genet. 2016 Dec 29;12 (12 ):e1006533.

8.

Delineation of the 3p14.1p13 microdeletion associated with syndromic distal limb contractures.

Thevenon J, Monnier N, Callier P, Dieterich K, Francoise M, Montgomery T, Kjaergaard S, Neas K, Dixon J, Dahm TL, Huet F, Ragon C, Mosca-Boidron AL, Marle N, Duplomb L, Aubriot-Lorton MH, Mugneret F, Vokes SA, Tucker HW, Lunardi J, Faivre L, Jouk PS, Thauvin-Robinet C.

Am J Med Genet A. 2014 Dec;164A(12):3027-34. doi: 10.1002/ajmg.a.36751. Epub 2014 Sep 24.

PMID:
25258245
9.

Dynamics of BMP signaling in limb bud mesenchyme and polydactyly.

Norrie JL, Lewandowski JP, Bouldin CM, Amarnath S, Li Q, Vokes MS, Ehrlich LIR, Harfe BD, Vokes SA.

Dev Biol. 2014 Sep 15;393(2):270-281. doi: 10.1016/j.ydbio.2014.07.003. Epub 2014 Jul 14.

10.

Transcriptional regulation of graded Hedgehog signaling.

Falkenstein KN, Vokes SA.

Semin Cell Dev Biol. 2014 Sep;33:73-80. doi: 10.1016/j.semcdb.2014.05.010. Epub 2014 May 23. Review.

11.

A Gli silencer is required for robust repression of gremlin in the vertebrate limb bud.

Li Q, Lewandowski JP, Powell MB, Norrie JL, Cho SH, Vokes SA.

Development. 2014 May;141(9):1906-14. doi: 10.1242/dev.104299. Epub 2014 Apr 3.

12.

Manipulating gene expression and signaling activity in cultured mouse limb bud cells.

Lewandowski JP, Pursell TA, Rabinowitz AH, Vokes SA.

Dev Dyn. 2014 Jul;243(7):928-36. doi: 10.1002/dvdy.24128. Epub 2014 Apr 17.

13.

Sonic hedgehog signaling directly targets Hyaluronic Acid Synthase 2, an essential regulator of phalangeal joint patterning.

Liu J, Li Q, Kuehn MR, Litingtung Y, Vokes SA, Chiang C.

Dev Biol. 2013 Mar 15;375(2):160-71. doi: 10.1016/j.ydbio.2012.12.018. Epub 2013 Jan 8.

14.

Deletion of Mthfd1l causes embryonic lethality and neural tube and craniofacial defects in mice.

Momb J, Lewandowski JP, Bryant JD, Fitch R, Surman DR, Vokes SA, Appling DR.

Proc Natl Acad Sci U S A. 2013 Jan 8;110(2):549-54. doi: 10.1073/pnas.1211199110. Epub 2012 Dec 24.

15.

Integration of the transcriptional networks regulating limb morphogenesis.

Rabinowitz AH, Vokes SA.

Dev Biol. 2012 Aug 15;368(2):165-80. doi: 10.1016/j.ydbio.2012.05.035. Epub 2012 Jun 7. Review.

16.

Hedgehog pathway-regulated gene networks in cerebellum development and tumorigenesis.

Lee EY, Ji H, Ouyang Z, Zhou B, Ma W, Vokes SA, McMahon AP, Wong WH, Scott MP.

Proc Natl Acad Sci U S A. 2010 May 25;107(21):9736-41. doi: 10.1073/pnas.1004602107. Epub 2010 May 11.

17.

Sox17 promotes differentiation in mouse embryonic stem cells by directly regulating extraembryonic gene expression and indirectly antagonizing self-renewal.

Niakan KK, Ji H, Maehr R, Vokes SA, Rodolfa KT, Sherwood RI, Yamaki M, Dimos JT, Chen AE, Melton DA, McMahon AP, Eggan K.

Genes Dev. 2010 Feb 1;24(3):312-26. doi: 10.1101/gad.1833510.

18.

Modeling the spatio-temporal network that drives patterning in the vertebrate central nervous system.

Nishi Y, Ji H, Wong WH, McMahon AP, Vokes SA.

Biochim Biophys Acta. 2009 Apr;1789(4):299-305. doi: 10.1016/j.bbagrm.2009.01.002. Review.

PMID:
19445894
19.

A genome-scale analysis of the cis-regulatory circuitry underlying sonic hedgehog-mediated patterning of the mammalian limb.

Vokes SA, Ji H, Wong WH, McMahon AP.

Genes Dev. 2008 Oct 1;22(19):2651-63. doi: 10.1101/gad.1693008.

20.

Genomic characterization of Gli-activator targets in sonic hedgehog-mediated neural patterning.

Vokes SA, Ji H, McCuine S, Tenzen T, Giles S, Zhong S, Longabaugh WJ, Davidson EH, Wong WH, McMahon AP.

Development. 2007 May;134(10):1977-89. Epub 2007 Apr 18.

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23.

A genome-wide RNA interference screen in Drosophila melanogaster cells for new components of the Hh signaling pathway.

Nybakken K, Vokes SA, Lin TY, McMahon AP, Perrimon N.

Nat Genet. 2005 Dec;37(12):1323-32. Epub 2005 Nov 20.

PMID:
16311596
24.

Hedgehog signaling: iguana debuts as a nuclear gatekeeper.

Vokes SA, McMahon AP.

Curr Biol. 2004 Aug 24;14(16):R668-70. Review.

25.

Hedgehog signaling is essential for endothelial tube formation during vasculogenesis.

Vokes SA, Yatskievych TA, Heimark RL, McMahon J, McMahon AP, Antin PB, Krieg PA.

Development. 2004 Sep;131(17):4371-80. Epub 2004 Aug 4.

26.

A role for the RNA-binding protein, hermes, in the regulation of heart development.

Gerber WV, Vokes SA, Zearfoss NR, Krieg PA.

Dev Biol. 2002 Jul 1;247(1):116-26.

27.
28.

Developmental expression of the Xenopus Iroquois-family homeobox genes, Irx4 and Irx5.

Garriock RJ, Vokes SA, Small EM, Larson R, Krieg PA.

Dev Genes Evol. 2001 May;211(5):257-60.

PMID:
11455441
29.

Developmental expression of the Xenopus Nkx2-1 and Nkx2-4 genes.

Small EM, Vokes SA, Garriock RJ, Li D, Krieg PA.

Mech Dev. 2000 Sep;96(2):259-62.

31.

The aerobactin iron transport system genes in Shigella flexneri are present within a pathogenicity island.

Vokes SA, Reeves SA, Torres AG, Payne SM.

Mol Microbiol. 1999 Jul;33(1):63-73.

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