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Items: 41

1.

Temporal phylogeography of Yersinia pestis in Madagascar: Insights into the long-term maintenance of plague.

Vogler AJ, Andrianaivoarimanana V, Telfer S, Hall CM, Sahl JW, Hepp CM, Centner H, Andersen G, Birdsell DN, Rahalison L, Nottingham R, Keim P, Wagner DM, Rajerison M.

PLoS Negl Trop Dis. 2017 Sep 5;11(9):e0005887. doi: 10.1371/journal.pntd.0005887. eCollection 2017 Sep.

2.

VNTR diversity in Yersinia pestis isolates from an animal challenge study reveals the potential for in vitro mutations during laboratory cultivation.

Vogler AJ, Nottingham R, Busch JD, Sahl JW, Shuey MM, Foster JT, Schupp JM, Smith SR, Rocke TE, Keim P, Wagner DM.

Infect Genet Evol. 2016 Nov;45:297-302. doi: 10.1016/j.meegid.2016.09.019. Epub 2016 Sep 21.

PMID:
27664903
3.

Effective Disinfectants for Coccidioides immitis and C. posadasii.

Vogler AJ, Nottingham R, Parise KL, Keim P, Barker BM.

Appl Biosaf. 2015;20(3):154-158.

4.

Viability of Yersinia pestis subcultures in agar stabs.

Leal NC, Sobreira M, Araújo AF, Magalhães JL, Vogler AJ, Bollig MC, Nottingham R, Keim P, Wagner DM, Almeida AM.

Lett Appl Microbiol. 2016 Jan;62(1):91-5. doi: 10.1111/lam.12519.

PMID:
26524218
5.

A review of methods for subtyping Yersinia pestis: From phenotypes to whole genome sequencing.

Vogler AJ, Keim P, Wagner DM.

Infect Genet Evol. 2016 Jan;37:21-36. doi: 10.1016/j.meegid.2015.10.024. Epub 2015 Oct 27. Review.

6.

Diverse Genotypes of Yersinia pestis Caused Plague in Madagascar in 2007.

Riehm JM, Projahn M, Vogler AJ, Rajerison M, Andersen G, Hall CM, Zimmermann T, Soanandrasana R, Andrianaivoarimanana V, Straubinger RK, Nottingham R, Keim P, Wagner DM, Scholz HC.

PLoS Negl Trop Dis. 2015 Jun 12;9(6):e0003844. doi: 10.1371/journal.pntd.0003844. eCollection 2015 Jun.

7.

Diverse Francisella tularensis strains and oropharyngeal tularemia, Turkey.

Özsürekci Y, Birdsell DN, Çelik M, Karadağ-Öncel E, Johansson A, Forsman M, Vogler AJ, Keim P, Ceyhan M, Wagner DM.

Emerg Infect Dis. 2015 Jan;21(1):173-5. doi: 10.3201/eid2101.141087. No abstract available.

8.

TaqMan real-time PCR assays for single-nucleotide polymorphisms which identify Francisella tularensis and its subspecies and subpopulations.

Birdsell DN, Vogler AJ, Buchhagen J, Clare A, Kaufman E, Naumann A, Driebe E, Wagner DM, Keim PS.

PLoS One. 2014 Sep 19;9(9):e107964. doi: 10.1371/journal.pone.0107964. eCollection 2014.

9.

Francisella tularensis subsp. tularensis group A.I, United States.

Birdsell DN, Johansson A, Öhrman C, Kaufman E, Molins C, Pearson T, Gyuranecz M, Naumann A, Vogler AJ, Myrtennäs K, Larsson P, Forsman M, Sjödin A, Gillece JD, Schupp J, Petersen JM, Keim P, Wagner DM.

Emerg Infect Dis. 2014 May;20(5):861-5. doi: 10.3201/eid2005.131559.

10.

Escherichia coli O157:H7 in Ecuador: animal reservoirs, yet no human disease.

Trueba G, Garcés V, V VB, Colman RE, Seymour M, Vogler AJ, Keim P.

Vector Borne Zoonotic Dis. 2013 May;13(5):295-8. doi: 10.1089/vbz.2012.1128. Epub 2013 Mar 8.

PMID:
23473224
11.

A decade of plague in Mahajanga, Madagascar: insights into the global maritime spread of pandemic plague.

Vogler AJ, Chan F, Nottingham R, Andersen G, Drees K, Beckstrom-Sternberg SM, Wagner DM, Chanteau S, Keim P.

MBio. 2013 Feb 12;4(1):e00623-12. doi: 10.1128/mBio.00623-12.

12.

Identification and typing of Francisella tularensis with a highly automated genotyping assay.

Duncan DD, Vogler AJ, Wolcott MJ, Li F, Sarovich DS, Birdsell DN, Watson LM, Hall TA, Sampath R, Housley R, Blyn LB, Hofstadler SA, Ecker DJ, Keim P, Wagner DM, Eshoo MW.

Lett Appl Microbiol. 2013 Feb;56(2):128-34. doi: 10.1111/lam.12022. Epub 2012 Nov 28.

13.

Phylogeography of Francisella tularensis subsp. holarctica, Europe.

Gyuranecz M, Birdsell DN, Splettstoesser W, Seibold E, Beckstrom-Sternberg SM, Makrai L, Fodor L, Fabbi M, Vicari N, Johansson A, Busch JD, Vogler AJ, Keim P, Wagner DM.

Emerg Infect Dis. 2012 Feb;18(2):290-3. doi: 10.3201/eid1802.111305.

14.

Tularemia in Alaska, 1938 - 2010.

Hansen CM, Vogler AJ, Keim P, Wagner DM, Hueffer K.

Acta Vet Scand. 2011 Nov 18;53:61. doi: 10.1186/1751-0147-53-61.

15.

Phylogeography and molecular epidemiology of Yersinia pestis in Madagascar.

Vogler AJ, Chan F, Wagner DM, Roumagnac P, Lee J, Nera R, Eppinger M, Ravel J, Rahalison L, Rasoamanana BW, Beckstrom-Sternberg SM, Achtman M, Chanteau S, Keim P.

PLoS Negl Trop Dis. 2011 Sep;5(9):e1319. doi: 10.1371/journal.pntd.0001319. Epub 2011 Sep 13.

16.

Phylogeography of Francisella tularensis subspecies holarctica from the country of Georgia.

Chanturia G, Birdsell DN, Kekelidze M, Zhgenti E, Babuadze G, Tsertsvadze N, Tsanava S, Imnadze P, Beckstrom-Sternberg SM, Beckstrom-Sternberg JS, Champion MD, Sinari S, Gyuranecz M, Farlow J, Pettus AH, Kaufman EL, Busch JD, Pearson T, Foster JT, Vogler AJ, Wagner DM, Keim P.

BMC Microbiol. 2011 Jun 17;11:139. doi: 10.1186/1471-2180-11-139.

17.

Phylogeography of Francisella tularensis ssp. holarctica in France.

Vogler AJ, Birdsell DN, Lee J, Vaissaire J, Doujet CL, Lapalus M, Wagner DM, Keim P.

Lett Appl Microbiol. 2011 Feb;52(2):177-80. doi: 10.1111/j.1472-765X.2010.02977.x.

18.

Accurate, rapid and high-throughput detection of strain-specific polymorphisms in Bacillus anthracis and Yersinia pestis by next-generation sequencing.

Cummings CA, Bormann Chung CA, Fang R, Barker M, Brzoska P, Williamson PC, Beaudry J, Matthews M, Schupp J, Wagner DM, Birdsell D, Vogler AJ, Furtado MR, Keim P, Budowle B.

Investig Genet. 2010 Sep 1;1(1):5. doi: 10.1186/2041-2223-1-5.

19.

Yersinia pestis genome sequencing identifies patterns of global phylogenetic diversity.

Morelli G, Song Y, Mazzoni CJ, Eppinger M, Roumagnac P, Wagner DM, Feldkamp M, Kusecek B, Vogler AJ, Li Y, Cui Y, Thomson NR, Jombart T, Leblois R, Lichtner P, Rahalison L, Petersen JM, Balloux F, Keim P, Wirth T, Ravel J, Yang R, Carniel E, Achtman M.

Nat Genet. 2010 Dec;42(12):1140-3. doi: 10.1038/ng.705. Epub 2010 Oct 31.

20.

Physiological responses to ergometer and on-water incremental rowing tests.

Vogler AJ, Rice AJ, Gore CJ.

Int J Sports Physiol Perform. 2010 Sep;5(3):342-58.

PMID:
20861524
21.

Validity and reliability of the Cortex MetaMax3B portable metabolic system.

Vogler AJ, Rice AJ, Gore CJ.

J Sports Sci. 2010 May;28(7):733-42. doi: 10.1080/02640410903582776.

PMID:
20419553
22.

No resistance plasmid in Yersinia pestis, North America.

Wagner DM, Runberg J, Vogler AJ, Lee J, Driebe E, Price LB, Engelthaler DM, Fricke WF, Ravel J, Keim P.

Emerg Infect Dis. 2010 May;16(5):885-7. doi: 10.3201/eid1605.090892. No abstract available.

23.

Within-host evolution of Burkholderia pseudomallei in four cases of acute melioidosis.

Price EP, Hornstra HM, Limmathurotsakul D, Max TL, Sarovich DS, Vogler AJ, Dale JL, Ginther JL, Leadem B, Colman RE, Foster JT, Tuanyok A, Wagner DM, Peacock SJ, Pearson T, Keim P.

PLoS Pathog. 2010 Jan 15;6(1):e1000725. doi: 10.1371/journal.ppat.1000725.

24.

Francisella tularensis subsp. novicida isolated from a human in Arizona.

Birdsell DN, Stewart T, Vogler AJ, Lawaczeck E, Diggs A, Sylvester TL, Buchhagen JL, Auerbach RK, Keim P, Wagner DM.

BMC Res Notes. 2009 Nov 6;2:223. doi: 10.1186/1756-0500-2-223.

25.

Fine-scale identification of the most likely source of a human plague infection.

Colman RE, Vogler AJ, Lowell JL, Gage KL, Morway C, Reynolds PJ, Ettestad P, Keim P, Kosoy MY, Wagner DM.

Emerg Infect Dis. 2009 Oct;15(10):1623-5. doi: 10.3201/eid1510.090188.

26.

Phylogeography of Francisella tularensis: global expansion of a highly fit clone.

Vogler AJ, Birdsell D, Price LB, Bowers JR, Beckstrom-Sternberg SM, Auerbach RK, Beckstrom-Sternberg JS, Johansson A, Clare A, Buchhagen JL, Petersen JM, Pearson T, Vaissaire J, Dempsey MP, Foxall P, Engelthaler DM, Wagner DM, Keim P.

J Bacteriol. 2009 Apr;191(8):2474-84. doi: 10.1128/JB.01786-08. Epub 2009 Feb 27.

27.

Physiological responses to exercise on different models of the concept II rowing ergometer.

Vogler AJ, Rice AJ, Withers RT.

Int J Sports Physiol Perform. 2007 Dec;2(4):360-70.

PMID:
19171954
28.

An optimized, multiplexed multi-locus variable-number tandem repeat analysis system for genotyping Francisella tularensis.

Vogler AJ, Birdsell D, Wagner DM, Keim P.

Lett Appl Microbiol. 2009 Jan;48(1):140-4. doi: 10.1111/j.1472-765X.2008.02484.x. Epub 2008 Nov 19.

29.

Assays for the rapid and specific identification of North American Yersinia pestis and the common laboratory strain CO92.

Vogler AJ, Driebe EM, Lee J, Auerbach RK, Allender CJ, Stanley M, Kubota K, Andersen GL, Radnedge L, Worsham PL, Keim P, Wagner DM.

Biotechniques. 2008 Feb;44(2):201, 203-4, 207.

30.

Genomic deletion marking an emerging subclone of Francisella tularensis subsp. holarctica in France and the Iberian Peninsula.

Dempsey MP, Dobson M, Zhang C, Zhang M, Lion C, Gutiérrez-Martín CB, Iwen PC, Fey PD, Olson ME, Niemeyer D, Francesconi S, Crawford R, Stanley M, Rhodes J, Wagner DM, Vogler AJ, Birdsell D, Keim P, Johansson A, Hinrichs SH, Benson AK.

Appl Environ Microbiol. 2007 Nov;73(22):7465-70. Epub 2007 Sep 21.

31.

Yersinia pestis evolution on a small timescale: comparison of whole genome sequences from North America.

Auerbach RK, Tuanyok A, Probert WS, Kenefic L, Vogler AJ, Bruce DC, Munk C, Brettin TS, Eppinger M, Ravel J, Wagner DM, Keim P.

PLoS One. 2007 Aug 22;2(8):e770.

32.

A North American Yersinia pestis draft genome sequence: SNPs and phylogenetic analysis.

Touchman JW, Wagner DM, Hao J, Mastrian SD, Shah MK, Vogler AJ, Allender CJ, Clark EA, Benitez DS, Youngkin DJ, Girard JM, Auerbach RK, Beckstrom-Sternberg SM, Keim P.

PLoS One. 2007 Feb 21;2(2):e220.

33.

VNTR analysis of selected outbreaks of Burkholderia pseudomallei in Australia.

Pearson T, U'Ren JM, Schupp JM, Allan GJ, Foster PG, Mayo MJ, Gal D, Choy JL, Daugherty RL, Kachur S, Friedman CL, Leadem B, Georgia S, Hornstra H, Vogler AJ, Wagner DM, Keim P, Currie BJ.

Infect Genet Evol. 2007 Jul;7(4):416-23. Epub 2006 Dec 20.

PMID:
17258514
34.

Mutations, mutation rates, and evolution at the hypervariable VNTR loci of Yersinia pestis.

Vogler AJ, Keys CE, Allender C, Bailey I, Girard J, Pearson T, Smith KL, Wagner DM, Keim P.

Mutat Res. 2007 Mar 1;616(1-2):145-58. Epub 2006 Dec 11.

PMID:
17161849
35.

Effect of repeat copy number on variable-number tandem repeat mutations in Escherichia coli O157:H7.

Vogler AJ, Keys C, Nemoto Y, Colman RE, Jay Z, Keim P.

J Bacteriol. 2006 Jun;188(12):4253-63.

36.

Identifying sources of human exposure to plague.

Lowell JL, Wagner DM, Atshabar B, Antolin MF, Vogler AJ, Keim P, Chu MC, Gage KL.

J Clin Microbiol. 2005 Feb;43(2):650-6.

37.

Microevolution and history of the plague bacillus, Yersinia pestis.

Achtman M, Morelli G, Zhu P, Wirth T, Diehl I, Kusecek B, Vogler AJ, Wagner DM, Allender CJ, Easterday WR, Chenal-Francisque V, Worsham P, Thomson NR, Parkhill J, Lindler LE, Carniel E, Keim P.

Proc Natl Acad Sci U S A. 2004 Dec 21;101(51):17837-42. Epub 2004 Dec 14.

38.

Anthrax molecular epidemiology and forensics: using the appropriate marker for different evolutionary scales.

Keim P, Van Ert MN, Pearson T, Vogler AJ, Huynh LY, Wagner DM.

Infect Genet Evol. 2004 Sep;4(3):205-13. Review.

PMID:
15450200
39.

Differential plague-transmission dynamics determine Yersinia pestis population genetic structure on local, regional, and global scales.

Girard JM, Wagner DM, Vogler AJ, Keys C, Allender CJ, Drickamer LC, Keim P.

Proc Natl Acad Sci U S A. 2004 Jun 1;101(22):8408-13. Epub 2004 May 20.

40.

Measurement and prediction of METs during household activities in 35- to 45-year-old females.

Brooks AG, Withers RT, Gore CJ, Vogler AJ, Plummer J, Cormack J.

Eur J Appl Physiol. 2004 May;91(5-6):638-48. Epub 2003 Dec 18.

PMID:
14685864
41.

Molecular analysis of rifampin resistance in Bacillus anthracis and Bacillus cereus.

Vogler AJ, Busch JD, Percy-Fine S, Tipton-Hunton C, Smith KL, Keim P.

Antimicrob Agents Chemother. 2002 Feb;46(2):511-3.

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